RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
HIF3A-218ENST00000600383 A0A1B0GVX0 72 aa8.72□□□□□ -1.01
HIF3A-218ENST00000600383 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
HIF3A-218ENST00000600383 SPINK1P00995 79 aa8.71□□□□□ -1.01
HIF3A-218ENST00000600383 LIMD2Q9BT23 127 aa8.71□□□□□ -1.01
HIF3A-218ENST00000600383 ASB16-AS1Q495Z4 193 aa8.71□□□□□ -1.02
HIF3A-218ENST00000600383 C1orf195Q5TG92 126 aa8.71□□□□□ -1.02
HIF3A-218ENST00000600383 MMP24-AS1A0A0U1RRL7 71 aa8.7□□□□□ -1.02
HIF3A-218ENST00000600383 KRTAP29-1A8MX34 341 aaPredicted RBP8.7□□□□□ -1.02
HIF3A-218ENST00000600383 C4orf26Q17RF5 130 aa8.7□□□□□ -1.02
HIF3A-218ENST00000600383 SERP1Q9Y6X1 66 aa8.7□□□□□ -1.02
HIF3A-218ENST00000600383 HSPG2P98160 4391 aa8.7□□□□□ -1.02
HIF3A-218ENST00000600383 hDV103S1A0JD37 113 aa8.69□□□□□ -1.02
HIF3A-218ENST00000600383 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
HIF3A-218ENST00000600383 NOTCH2NLQ7Z3S9 236 aa8.68□□□□□ -1.02
HIF3A-218ENST00000600383 KRTAP17-1Q9BYP8 105 aa8.67□□□□□ -1.02
HIF3A-218ENST00000600383 EPPK1P58107 5090 aaKnown RBP8.67□□□□□ -1.02
HIF3A-218ENST00000600383 SNURFQ9Y675 71 aa8.66□□□□□ -1.02
HIF3A-218ENST00000600383 NDUFC1O43677 76 aa8.65□□□□□ -1.02
HIF3A-218ENST00000600383 SPAG11AQ6PDA7 123 aa8.65□□□□□ -1.02
HIF3A-218ENST00000600383 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.02
HIF3A-218ENST00000600383 RYR1P21817 5038 aa8.64□□□□□ -1.03
HIF3A-218ENST00000600383 NDUFS5O43920 106 aa8.62□□□□□ -1.03
HIF3A-218ENST00000600383 TMEM254Q8TBM7 123 aa8.62□□□□□ -1.03
HIF3A-218ENST00000600383 ATP5EP56381 51 aaPredicted RBP8.61□□□□□ -1.03
HIF3A-218ENST00000600383 FLG2Q5D862 2391 aaPredicted RBP8.59□□□□□ -1.03
HIF3A-218ENST00000600383 LINC00313P59037 77 aa8.59□□□□□ -1.03
HIF3A-218ENST00000600383 Q8N1X5 172 aa8.59□□□□□ -1.03
HIF3A-218ENST00000600383 MRPL34Q9BQ48 92 aaKnown RBP8.59□□□□□ -1.03
HIF3A-218ENST00000600383 RPS29P62273 56 aaKnown RBP8.58□□□□□ -1.04
HIF3A-218ENST00000600383 SMIM26A0A096LP01 95 aa8.57□□□□□ -1.04
HIF3A-218ENST00000600383 LRP1Q07954 4544 aaKnown RBP8.57□□□□□ -1.04
HIF3A-218ENST00000600383 C8orf87E5RJ46 101 aa8.56□□□□□ -1.04
HIF3A-218ENST00000600383 FP248Q71RG6 208 aaPredicted RBP8.54□□□□□ -1.04
HIF3A-218ENST00000600383 A0A0U1RQV1 116 aa8.54□□□□□ -1.04
HIF3A-218ENST00000600383 RETNLBQ9BQ08 111 aa8.53□□□□□ -1.04
HIF3A-218ENST00000600383 PKHD1L1Q86WI1 4243 aa8.53□□□□□ -1.04
HIF3A-218ENST00000600383 MP68P56378 58 aa8.53□□□□□ -1.04
HIF3A-218ENST00000600383 KRTAP10-8P60410 259 aa8.52□□□□□ -1.05
HIF3A-218ENST00000600383 H0Y9P7 68 aa8.51□□□□□ -1.05
HIF3A-218ENST00000600383 TP53AIP1Q9HCN2 124 aa8.51□□□□□ -1.05
HIF3A-218ENST00000600383 LINC00208Q96KT6 92 aa8.51□□□□□ -1.05
HIF3A-218ENST00000600383 TRAV22A0A0B4J277 110 aa8.48□□□□□ -1.05
HIF3A-218ENST00000600383 PRO0628Q9UI54 55 aa8.48□□□□□ -1.05
HIF3A-218ENST00000600383 DMBT1Q9UGM3 2413 aaPredicted RBP8.48□□□□□ -1.05
HIF3A-218ENST00000600383 C1orf64Q8NEQ6 169 aa8.45□□□□□ -1.06
HIF3A-218ENST00000600383 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
HIF3A-218ENST00000600383 TNXBP22105 4242 aa8.44□□□□□ -1.06
HIF3A-218ENST00000600383 KRTAP16-1A8MUX0 517 aa8.44□□□□□ -1.06
HIF3A-218ENST00000600383 ZCCHC13Q8WW36 166 aaKnown RBP8.44□□□□□ -1.06
HIF3A-218ENST00000600383 KRTAP4-5Q9BYR2 181 aa8.44□□□□□ -1.06
HIF3A-218ENST00000600383 C9orf92A6NGG3 77 aa8.43□□□□□ -1.06
HIF3A-218ENST00000600383 Q5W150 140 aa8.42□□□□□ -1.06
HIF3A-218ENST00000600383 Q8N9P0 234 aaPredicted RBP8.42□□□□□ -1.06
HIF3A-218ENST00000600383 H3BPC8 53 aa8.4□□□□□ -1.06
HIF3A-218ENST00000600383 FAT3Q8TDW7 4589 aa8.4□□□□□ -1.07
HIF3A-218ENST00000600383 MT1HL1P0DM35 61 aa8.39□□□□□ -1.07
HIF3A-218ENST00000600383 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
HIF3A-218ENST00000600383 KRTAP13-3Q3SY46 172 aa8.33□□□□□ -1.08
HIF3A-218ENST00000600383 PRR4Q16378 134 aa8.32□□□□□ -1.08
HIF3A-218ENST00000600383 MPLKIPQ8TAP9 179 aa8.31□□□□□ -1.08
HIF3A-218ENST00000600383 LOC101927531A0A1B0GV80 90 aa8.29□□□□□ -1.08
HIF3A-218ENST00000600383 BRK1Q8WUW1 75 aa8.29□□□□□ -1.08
HIF3A-218ENST00000600383 IGLV7-46A0A075B6I9 117 aa8.27□□□□□ -1.09
HIF3A-218ENST00000600383 CYP4F30PQ9H0H9 118 aa8.26□□□□□ -1.09
HIF3A-218ENST00000600383 Q1T7F1 81 aa8.25□□□□□ -1.09
HIF3A-218ENST00000600383 IGKV2D-30A0A075B6S6 120 aa8.24□□□□□ -1.09
HIF3A-218ENST00000600383 IGKV2-30P06310 120 aa8.24□□□□□ -1.09
HIF3A-218ENST00000600383 C20orf166-AS1Q96NR2 134 aa8.24□□□□□ -1.09
HIF3A-218ENST00000600383 A8MUU9 505 aa8.23□□□□□ -1.09
HIF3A-218ENST00000600383 SPANXA2-OT1Q8N9U9 137 aa8.2□□□□□ -1.1
HIF3A-218ENST00000600383 BIRC6Q9NR09 4857 aa8.2□□□□□ -1.1
HIF3A-218ENST00000600383 ABCA13Q86UQ4 5058 aa8.19□□□□□ -1.1
HIF3A-218ENST00000600383 J3QL48 77 aa8.17□□□□□ -1.1
HIF3A-218ENST00000600383 Q75L30 129 aa8.15□□□□□ -1.1
HIF3A-218ENST00000600383 HRES1P13985 223 aa8.14□□□□□ -1.11
HIF3A-218ENST00000600383 HERC2O95714 4834 aa8.13□□□□□ -1.11
HIF3A-218ENST00000600383 XP32Q5T750 250 aa8.12□□□□□ -1.11
HIF3A-218ENST00000600383 V9GYY9 64 aa8.12□□□□□ -1.11
HIF3A-218ENST00000600383 ATP11AUNQ6ZP68 121 aa8.11□□□□□ -1.11
HIF3A-218ENST00000600383 C7orf65Q6ZTY9 151 aa8.11□□□□□ -1.11
HIF3A-218ENST00000600383 RPL37P61927 97 aaKnown RBP8.07□□□□□ -1.12
HIF3A-218ENST00000600383 PSPHP1O15172 72 aa8.06□□□□□ -1.12
HIF3A-218ENST00000600383 SPINK7P58062 85 aa8.06□□□□□ -1.12
HIF3A-218ENST00000600383 TPRXLQ17RH7 258 aa8.03□□□□□ -1.12
HIF3A-218ENST00000600383 COA5Q86WW8 74 aa8.03□□□□□ -1.12
HIF3A-218ENST00000600383 A8MUN3 132 aa8.02□□□□□ -1.13
HIF3A-218ENST00000600383 Q5VV11 94 aa8.01□□□□□ -1.13
HIF3A-218ENST00000600383 LPAP08519 4548 aa7.99□□□□□ -1.13
HIF3A-218ENST00000600383 ACYP2P14621 99 aa7.99□□□□□ -1.13
HIF3A-218ENST00000600383 DMAC1Q96GE9 116 aa7.99□□□□□ -1.13
HIF3A-218ENST00000600383 PMAIP1Q13794 54 aa7.97□□□□□ -1.13
HIF3A-218ENST00000600383 LRP2P98164 4655 aa7.95□□□□□ -1.14
HIF3A-218ENST00000600383 CHKB-CPT1BH3BT56 60 aa7.91□□□□□ -1.14
HIF3A-218ENST00000600383 SEC61GP60059 68 aa7.9□□□□□ -1.14
HIF3A-218ENST00000600383 PRR15LQ9BU68 103 aa7.9□□□□□ -1.15
HIF3A-218ENST00000600383 PCLOQ9Y6V0 5065 aa7.89□□□□□ -1.15
HIF3A-218ENST00000600383 A8MU10 97 aa7.88□□□□□ -1.15
HIF3A-218ENST00000600383 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
HIF3A-218ENST00000600383 LINC01558Q9Y6Z2 57 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms