RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 KRTAP19-6Q3LI70 58 aa3.05□□□□□ -1.92
VRK3-220ENST00000600259 ETDBQ3ZM63 59 aa3.05□□□□□ -1.92
VRK3-220ENST00000600259 Q6JHZ5 121 aa3.05□□□□□ -1.92
VRK3-220ENST00000600259 LINC00575Q6W349 94 aa3.05□□□□□ -1.92
VRK3-220ENST00000600259 MUSTN1Q8IVN3 82 aa3.05□□□□□ -1.92
VRK3-220ENST00000600259 MPLKIPQ8TAP9 179 aa3.05□□□□□ -1.92
VRK3-220ENST00000600259 Q96NJ1 140 aa3.05□□□□□ -1.92
VRK3-220ENST00000600259 HIST1H4GQ99525 98 aa3.05□□□□□ -1.92
VRK3-220ENST00000600259 KRTAP10-10P60014 251 aa3.04□□□□□ -1.92
VRK3-220ENST00000600259 TEN1Q86WV5 123 aa3.04□□□□□ -1.92
VRK3-220ENST00000600259 PPDPFLQ8WWR9 84 aa3.04□□□□□ -1.92
VRK3-220ENST00000600259 CLEC2BQ92478 149 aa3.04□□□□□ -1.92
VRK3-220ENST00000600259 TRAV13-2A0A0B4J235 113 aa3.02□□□□□ -1.93
VRK3-220ENST00000600259 A0A0B4J2C4 111 aa3.02□□□□□ -1.93
VRK3-220ENST00000600259 F8WEM9 126 aa3.02□□□□□ -1.93
VRK3-220ENST00000600259 LST1O00453 97 aa3.02□□□□□ -1.93
VRK3-220ENST00000600259 HRES1P13985 223 aa3.02□□□□□ -1.93
VRK3-220ENST00000600259 Q6ZQY7 126 aa3.02□□□□□ -1.93
VRK3-220ENST00000600259 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
VRK3-220ENST00000600259 hADV29S1A0JD25 119 aa3.01□□□□□ -1.93
VRK3-220ENST00000600259 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
VRK3-220ENST00000600259 SCGB1D4Q6XE38 83 aa3.01□□□□□ -1.93
VRK3-220ENST00000600259 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
VRK3-220ENST00000600259 PSMB2P49721 201 aa3□□□□□ -1.93
VRK3-220ENST00000600259 NOTCH2NLQ7Z3S9 236 aa3□□□□□ -1.93
VRK3-220ENST00000600259 COPS9Q8WXC6 57 aa3□□□□□ -1.93
VRK3-220ENST00000600259 PRO1854Q9UHT4 67 aa3□□□□□ -1.93
VRK3-220ENST00000600259 FAM240AA0A1B0GVK7 77 aa2.99□□□□□ -1.93
VRK3-220ENST00000600259 KRTAP23-1A1A580 65 aa2.99□□□□□ -1.93
VRK3-220ENST00000600259 MT-ATP8P03928 68 aa2.99□□□□□ -1.93
VRK3-220ENST00000600259 SCGB1C2P0DMR2 95 aa2.99□□□□□ -1.93
VRK3-220ENST00000600259 ATXN8Q156A1 80 aa2.99□□□□□ -1.93
VRK3-220ENST00000600259 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.99□□□□□ -1.93
VRK3-220ENST00000600259 ANKRD29Q8N6D5 301 aa2.99□□□□□ -1.93
VRK3-220ENST00000600259 H3BT86 120 aa2.98□□□□□ -1.93
VRK3-220ENST00000600259 DSCR10P59022 87 aa2.98□□□□□ -1.93
VRK3-220ENST00000600259 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
VRK3-220ENST00000600259 ANAPC13Q9BS18 74 aa2.98□□□□□ -1.93
VRK3-220ENST00000600259 SNCGO76070 127 aa2.97□□□□□ -1.93
VRK3-220ENST00000600259 NDUFV3P56181 108 aaKnown RBP2.97□□□□□ -1.93
VRK3-220ENST00000600259 IMUPQ9GZP8 106 aa2.97□□□□□ -1.93
VRK3-220ENST00000600259 FAM236DA0A1B0GTK5 79 aa2.96□□□□□ -1.94
VRK3-220ENST00000600259 C9JAW5 83 aa2.96□□□□□ -1.94
VRK3-220ENST00000600259 ACYP1P07311 99 aa2.96□□□□□ -1.94
VRK3-220ENST00000600259 FAM236CP0DP71 79 aa2.96□□□□□ -1.94
VRK3-220ENST00000600259 LINC00846Q9NV44 126 aa2.96□□□□□ -1.94
VRK3-220ENST00000600259 SS18L2Q9UHA2 77 aa2.96□□□□□ -1.94
VRK3-220ENST00000600259 A0A087WSZ3 146 aa2.95□□□□□ -1.94
VRK3-220ENST00000600259 COX6CP09669 75 aa2.95□□□□□ -1.94
VRK3-220ENST00000600259 RBM12B-AS1Q9P1G2 102 aa2.95□□□□□ -1.94
VRK3-220ENST00000600259 A0A1W2PNM2 257 aa2.94□□□□□ -1.94
VRK3-220ENST00000600259 LINC00313P59037 77 aa2.94□□□□□ -1.94
VRK3-220ENST00000600259 TRIAP1O43715 76 aa2.93□□□□□ -1.94
VRK3-220ENST00000600259 FAM218AQ96MZ4 157 aa2.92□□□□□ -1.94
VRK3-220ENST00000600259 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
VRK3-220ENST00000600259 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
VRK3-220ENST00000600259 TRACP01848 142 aa2.91□□□□□ -1.94
VRK3-220ENST00000600259 LINC00643Q86TS7 51 aa2.91□□□□□ -1.94
VRK3-220ENST00000600259 LINC00472Q9H8W2 130 aa2.91□□□□□ -1.94
VRK3-220ENST00000600259 NEBP20929 6669 aa2.91□□□□□ -1.94
VRK3-220ENST00000600259 UQCRQO14949 82 aa2.9□□□□□ -1.95
VRK3-220ENST00000600259 IGKV4-1P06312 121 aa2.9□□□□□ -1.95
VRK3-220ENST00000600259 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
VRK3-220ENST00000600259 A0A1B0GX51 115 aa2.89□□□□□ -1.95
VRK3-220ENST00000600259 A8MWP4 228 aa2.89□□□□□ -1.95
VRK3-220ENST00000600259 H0YGX0 51 aa2.89□□□□□ -1.95
VRK3-220ENST00000600259 SPINK7P58062 85 aa2.89□□□□□ -1.95
VRK3-220ENST00000600259 DEFB116Q30KQ4 102 aa2.89□□□□□ -1.95
VRK3-220ENST00000600259 Q8N9P0 234 aaPredicted RBP2.89□□□□□ -1.95
VRK3-220ENST00000600259 TRBV7-4A0A0J9YYF1 115 aa2.88□□□□□ -1.95
VRK3-220ENST00000600259 HIST1H4AP62805 103 aaKnown RBP2.88□□□□□ -1.95
VRK3-220ENST00000600259 RPS28P62857 69 aaKnown RBP2.88□□□□□ -1.95
VRK3-220ENST00000600259 SMIM20Q8N5G0 67 aa2.88□□□□□ -1.95
VRK3-220ENST00000600259 ATOX1O00244 68 aa2.87□□□□□ -1.95
VRK3-220ENST00000600259 ZCCHC13Q8WW36 166 aaKnown RBP2.87□□□□□ -1.95
VRK3-220ENST00000600259 IGHV6-1A0A0B4J1U7 121 aa2.86□□□□□ -1.95
VRK3-220ENST00000600259 FAM236AA0A1B0GUQ0 79 aa2.86□□□□□ -1.95
VRK3-220ENST00000600259 FAM236BA0A1B0GV22 79 aa2.86□□□□□ -1.95
VRK3-220ENST00000600259 COX7CP15954 63 aa2.86□□□□□ -1.95
VRK3-220ENST00000600259 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
VRK3-220ENST00000600259 J3KT08 172 aa2.85□□□□□ -1.95
VRK3-220ENST00000600259 BAALC-AS2P0C853 105 aa2.85□□□□□ -1.95
VRK3-220ENST00000600259 A0A1B0GVX0 72 aa2.84□□□□□ -1.95
VRK3-220ENST00000600259 C8orf87E5RJ46 101 aa2.84□□□□□ -1.95
VRK3-220ENST00000600259 TMEM258P61165 79 aa2.84□□□□□ -1.95
VRK3-220ENST00000600259 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
VRK3-220ENST00000600259 C5orf47Q569G3 176 aa2.83□□□□□ -1.96
VRK3-220ENST00000600259 ATP5EP2Q5VTU8 51 aa2.83□□□□□ -1.96
VRK3-220ENST00000600259 DNAL4O96015 105 aa2.82□□□□□ -1.96
VRK3-220ENST00000600259 CCKP06307 115 aa2.82□□□□□ -1.96
VRK3-220ENST00000600259 MT1BP07438 61 aa2.82□□□□□ -1.96
VRK3-220ENST00000600259 WFDC13Q8IUB5 93 aa2.82□□□□□ -1.96
VRK3-220ENST00000600259 SERP2Q8N6R1 65 aa2.82□□□□□ -1.96
VRK3-220ENST00000600259 JMJD7-PLA2G4BH0Y9G9 81 aa2.81□□□□□ -1.96
VRK3-220ENST00000600259 H3BQ85 93 aa2.8□□□□□ -1.96
VRK3-220ENST00000600259 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
VRK3-220ENST00000600259 H1FX-AS1Q4G0G2 97 aa2.8□□□□□ -1.96
VRK3-220ENST00000600259 ORMDL1Q9P0S3 153 aa2.8□□□□□ -1.96
VRK3-220ENST00000600259 KMT2DO14686 5537 aa2.79□□□□□ -1.96
VRK3-220ENST00000600259 TMEM256-PLSCR3K7ERE1 68 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms