RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 TPRXLQ17RH7 258 aa12.11□□□□□ -0.47
LTBP4-224ENST00000599016 A0A1B0GVX0 72 aa12.1□□□□□ -0.47
LTBP4-224ENST00000599016 DSCR10P59022 87 aa12.1□□□□□ -0.47
LTBP4-224ENST00000599016 IGHV6-1A0A0B4J1U7 121 aa12.09□□□□□ -0.47
LTBP4-224ENST00000599016 CXCL6P80162 114 aa12.08□□□□□ -0.48
LTBP4-224ENST00000599016 KRTAP13-3Q3SY46 172 aa12.08□□□□□ -0.48
LTBP4-224ENST00000599016 LINC00643Q86TS7 51 aa12.08□□□□□ -0.48
LTBP4-224ENST00000599016 IGKV3D-7A0A0C4DH55 119 aa12.07□□□□□ -0.48
LTBP4-224ENST00000599016 C9orf92A6NGG3 77 aa12.07□□□□□ -0.48
LTBP4-224ENST00000599016 ATP5EP2Q5VTU8 51 aa12.07□□□□□ -0.48
LTBP4-224ENST00000599016 PRR15Q8IV56 129 aa12.06□□□□□ -0.48
LTBP4-224ENST00000599016 LPAP08519 4548 aa12.05□□□□□ -0.48
LTBP4-224ENST00000599016 C8orf87E5RJ46 101 aa12.05□□□□□ -0.48
LTBP4-224ENST00000599016 KRTAP9-2Q9BYQ4 174 aa12.05□□□□□ -0.48
LTBP4-224ENST00000599016 LINC00313P59037 77 aa12.04□□□□□ -0.48
LTBP4-224ENST00000599016 K7EQZ3 153 aa12.03□□□□□ -0.48
LTBP4-224ENST00000599016 CDIP1Q9H305 208 aa12.02□□□□□ -0.49
LTBP4-224ENST00000599016 Q8N9L7 120 aa12□□□□□ -0.49
LTBP4-224ENST00000599016 C8orf17Q9NRJ1 99 aa11.98□□□□□ -0.49
LTBP4-224ENST00000599016 NOTCH2NLQ7Z3S9 236 aa11.96□□□□□ -0.49
LTBP4-224ENST00000599016 XP32Q5T750 250 aa11.93□□□□□ -0.5
LTBP4-224ENST00000599016 MMP24-AS1A0A0U1RRL7 71 aa11.91□□□□□ -0.5
LTBP4-224ENST00000599016 MUC2Q02817 5179 aa11.9□□□□□ -0.5
LTBP4-224ENST00000599016 HIST1H4AP62805 103 aaKnown RBP11.9□□□□□ -0.5
LTBP4-224ENST00000599016 KRTAP16-1A8MUX0 517 aa11.88□□□□□ -0.51
LTBP4-224ENST00000599016 hDV103S1A0JD37 113 aa11.87□□□□□ -0.51
LTBP4-224ENST00000599016 KRTAP9-6A0A140TA67 174 aa11.86□□□□□ -0.51
LTBP4-224ENST00000599016 HCG22E2RYF7 251 aa11.86□□□□□ -0.51
LTBP4-224ENST00000599016 WFDC13Q8IUB5 93 aa11.86□□□□□ -0.51
LTBP4-224ENST00000599016 TMEM254Q8TBM7 123 aa11.86□□□□□ -0.51
LTBP4-224ENST00000599016 CASC2Q6XLA1 102 aa11.85□□□□□ -0.51
LTBP4-224ENST00000599016 MRPL34Q9BQ48 92 aaKnown RBP11.83□□□□□ -0.52
LTBP4-224ENST00000599016 Q75L30 129 aa11.82□□□□□ -0.52
LTBP4-224ENST00000599016 C20orf166-AS1Q96NR2 134 aa11.82□□□□□ -0.52
LTBP4-224ENST00000599016 A8MUU9 505 aa11.81□□□□□ -0.52
LTBP4-224ENST00000599016 MT-ATP8P03928 68 aa11.8□□□□□ -0.52
LTBP4-224ENST00000599016 RPL37P61927 97 aaKnown RBP11.8□□□□□ -0.52
LTBP4-224ENST00000599016 FAT4Q6V0I7 4981 aa11.78□□□□□ -0.52
LTBP4-224ENST00000599016 Q8N9P0 234 aaPredicted RBP11.77□□□□□ -0.53
LTBP4-224ENST00000599016 IMUPQ9GZP8 106 aa11.77□□□□□ -0.53
LTBP4-224ENST00000599016 A0A087WVE0 104 aa11.76□□□□□ -0.53
LTBP4-224ENST00000599016 NDUFS5O43920 106 aa11.74□□□□□ -0.53
LTBP4-224ENST00000599016 SEC61BP60468 96 aaKnown RBP11.74□□□□□ -0.53
LTBP4-224ENST00000599016 ATP11AUNQ6ZP68 121 aa11.72□□□□□ -0.53
LTBP4-224ENST00000599016 PCOTHQ58A44 107 aa11.66□□□□□ -0.54
LTBP4-224ENST00000599016 LCE2AQ5TA79 106 aaPredicted RBP11.65□□□□□ -0.54
LTBP4-224ENST00000599016 ZCCHC13Q8WW36 166 aaKnown RBP11.62□□□□□ -0.55
LTBP4-224ENST00000599016 TP53AIP1Q9HCN2 124 aa11.61□□□□□ -0.55
LTBP4-224ENST00000599016 MUC17Q685J3 4493 aa11.59□□□□□ -0.55
LTBP4-224ENST00000599016 SCGB1A1P11684 91 aa11.58□□□□□ -0.56
LTBP4-224ENST00000599016 FAM236AA0A1B0GUQ0 79 aa11.54□□□□□ -0.56
LTBP4-224ENST00000599016 FAM236BA0A1B0GV22 79 aa11.54□□□□□ -0.56
LTBP4-224ENST00000599016 UQCRQO14949 82 aa11.49□□□□□ -0.57
LTBP4-224ENST00000599016 Q5W150 140 aa11.49□□□□□ -0.57
LTBP4-224ENST00000599016 A0A0U1RQV1 116 aa11.46□□□□□ -0.57
LTBP4-224ENST00000599016 OCR1Q9BZK8 76 aa11.45□□□□□ -0.58
LTBP4-224ENST00000599016 SMIM20Q8N5G0 67 aa11.44□□□□□ -0.58
LTBP4-224ENST00000599016 TRAV22A0A0B4J277 110 aa11.42□□□□□ -0.58
LTBP4-224ENST00000599016 ATOX1O00244 68 aa11.42□□□□□ -0.58
LTBP4-224ENST00000599016 KRTAP4-1Q9BYQ7 146 aa11.4□□□□□ -0.58
LTBP4-224ENST00000599016 H0Y9P7 68 aa11.37□□□□□ -0.59
LTBP4-224ENST00000599016 SPINK7P58062 85 aa11.37□□□□□ -0.59
LTBP4-224ENST00000599016 IGKV2D-30A0A075B6S6 120 aa11.35□□□□□ -0.59
LTBP4-224ENST00000599016 TRAV7A0A075B6U4 112 aa11.35□□□□□ -0.59
LTBP4-224ENST00000599016 IGKV2-30P06310 120 aa11.35□□□□□ -0.59
LTBP4-224ENST00000599016 C5orf47Q569G3 176 aa11.35□□□□□ -0.59
LTBP4-224ENST00000599016 MP68P56378 58 aa11.34□□□□□ -0.59
LTBP4-224ENST00000599016 C7orf65Q6ZTY9 151 aa11.34□□□□□ -0.59
LTBP4-224ENST00000599016 LOC101927531A0A1B0GV80 90 aa11.29□□□□□ -0.6
LTBP4-224ENST00000599016 FSIP2Q5CZC0 6907 aa11.26□□□□□ -0.61
LTBP4-224ENST00000599016 H3BPC8 53 aa11.26□□□□□ -0.61
LTBP4-224ENST00000599016 LINC00208Q96KT6 92 aa11.26□□□□□ -0.61
LTBP4-224ENST00000599016 SERP2Q8N6R1 65 aa11.25□□□□□ -0.61
LTBP4-224ENST00000599016 C1orf64Q8NEQ6 169 aa11.25□□□□□ -0.61
LTBP4-224ENST00000599016 CRCT1Q9UGL9 99 aa11.24□□□□□ -0.61
LTBP4-224ENST00000599016 HRES1P13985 223 aa11.22□□□□□ -0.61
LTBP4-224ENST00000599016 CYP4F30PQ9H0H9 118 aa11.21□□□□□ -0.61
LTBP4-224ENST00000599016 LCE2DQ5TA82 110 aaPredicted RBP11.18□□□□□ -0.62
LTBP4-224ENST00000599016 RBM12B-AS1Q9P1G2 102 aa11.18□□□□□ -0.62
LTBP4-224ENST00000599016 MPLKIPQ8TAP9 179 aa11.13□□□□□ -0.63
LTBP4-224ENST00000599016 ANAPC13Q9BS18 74 aa11.13□□□□□ -0.63
LTBP4-224ENST00000599016 COX7CP15954 63 aa11.11□□□□□ -0.63
LTBP4-224ENST00000599016 FAM236DA0A1B0GTK5 79 aa11.1□□□□□ -0.63
LTBP4-224ENST00000599016 FAM236CP0DP71 79 aa11.1□□□□□ -0.63
LTBP4-224ENST00000599016 COX6B2Q6YFQ2 88 aa11.1□□□□□ -0.63
LTBP4-224ENST00000599016 C20orf197Q8N268 126 aa11.07□□□□□ -0.64
LTBP4-224ENST00000599016 C4orf26Q17RF5 130 aa11.05□□□□□ -0.64
LTBP4-224ENST00000599016 KLKP1Q107X0 134 aa11.04□□□□□ -0.64
LTBP4-224ENST00000599016 SNURFQ9Y675 71 aa11.04□□□□□ -0.64
LTBP4-224ENST00000599016 KRTAP19-2Q3LHN2 52 aa11.02□□□□□ -0.65
LTBP4-224ENST00000599016 LCE2CQ5TA81 110 aa10.94□□□□□ -0.66
LTBP4-224ENST00000599016 H1FX-AS1Q4G0G2 97 aa10.9□□□□□ -0.66
LTBP4-224ENST00000599016 NDUFC1O43677 76 aa10.86□□□□□ -0.67
LTBP4-224ENST00000599016 KRTAP3-1Q9BYR8 98 aa10.86□□□□□ -0.67
LTBP4-224ENST00000599016 CCDC179H3BU77 68 aa10.85□□□□□ -0.67
LTBP4-224ENST00000599016 A8MUN3 132 aa10.84□□□□□ -0.67
LTBP4-224ENST00000599016 FLGP20930 4061 aaPredicted RBP10.8□□□□□ -0.68
LTBP4-224ENST00000599016 SPANXA2-OT1Q8N9U9 137 aa10.79□□□□□ -0.68
LTBP4-224ENST00000599016 MT1HP80294 61 aa10.78□□□□□ -0.68
LTBP4-224ENST00000599016 DMAC1Q96GE9 116 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms