RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 PRO0461Q9UI25 63 aa6.04□□□□□ -1.44
SMG9-207ENST00000598860 RBM3P98179 157 aaKnown RBP6.03□□□□□ -1.44
SMG9-207ENST00000598860 PDE6GP18545 87 aa6.02□□□□□ -1.45
SMG9-207ENST00000598860 DSCR8Q96T75 97 aa6.02□□□□□ -1.45
SMG9-207ENST00000598860 CD164Q04900 197 aa6.01□□□□□ -1.45
SMG9-207ENST00000598860 SPAG11AQ6PDA7 123 aa6.01□□□□□ -1.45
SMG9-207ENST00000598860 OBSCN-AS1Q96MR7 158 aa6.01□□□□□ -1.45
SMG9-207ENST00000598860 TRBV7-4A0A0J9YYF1 115 aa6□□□□□ -1.45
SMG9-207ENST00000598860 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
SMG9-207ENST00000598860 IGFL1Q6UW32 110 aa6□□□□□ -1.45
SMG9-207ENST00000598860 LINC00304Q8N9R0 145 aa6□□□□□ -1.45
SMG9-207ENST00000598860 Q6Q795 121 aa5.99□□□□□ -1.45
SMG9-207ENST00000598860 TEN1Q86WV5 123 aa5.99□□□□□ -1.45
SMG9-207ENST00000598860 LOC110117498A0A087WWA1 95 aa5.98□□□□□ -1.45
SMG9-207ENST00000598860 RPS29P62273 56 aaKnown RBP5.98□□□□□ -1.45
SMG9-207ENST00000598860 A0A1B0GV72 72 aa5.97□□□□□ -1.45
SMG9-207ENST00000598860 SPINK1P00995 79 aa5.97□□□□□ -1.45
SMG9-207ENST00000598860 ETDBQ3ZM63 59 aa5.96□□□□□ -1.46
SMG9-207ENST00000598860 C14orf132Q9NPU4 83 aa5.96□□□□□ -1.46
SMG9-207ENST00000598860 TNXBP22105 4242 aa5.95□□□□□ -1.46
SMG9-207ENST00000598860 A0A1B0GW54 56 aa5.95□□□□□ -1.46
SMG9-207ENST00000598860 CCKP06307 115 aa5.95□□□□□ -1.46
SMG9-207ENST00000598860 Q6ZQT0 140 aa5.95□□□□□ -1.46
SMG9-207ENST00000598860 LIMD2Q9BT23 127 aa5.95□□□□□ -1.46
SMG9-207ENST00000598860 TRBV7-7A0A0K0K1E9 115 aa5.94□□□□□ -1.46
SMG9-207ENST00000598860 SS18L2Q9UHA2 77 aa5.94□□□□□ -1.46
SMG9-207ENST00000598860 A0A1W2PNM2 257 aa5.93□□□□□ -1.46
SMG9-207ENST00000598860 Q5XG85 94 aa5.93□□□□□ -1.46
SMG9-207ENST00000598860 KRTAP5-11Q6L8G4 156 aa5.93□□□□□ -1.46
SMG9-207ENST00000598860 A0A0G2JQZ4 141 aa5.92□□□□□ -1.46
SMG9-207ENST00000598860 CXCL6P80162 114 aa5.92□□□□□ -1.46
SMG9-207ENST00000598860 HRCT1Q6UXD1 115 aa5.92□□□□□ -1.46
SMG9-207ENST00000598860 VPS25Q9BRG1 176 aa5.92□□□□□ -1.46
SMG9-207ENST00000598860 A0A087WSZ3 146 aa5.89□□□□□ -1.47
SMG9-207ENST00000598860 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
SMG9-207ENST00000598860 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
SMG9-207ENST00000598860 J3QR89 54 aa5.86□□□□□ -1.47
SMG9-207ENST00000598860 PRR4Q16378 134 aa5.86□□□□□ -1.47
SMG9-207ENST00000598860 FAM240AA0A1B0GVK7 77 aa5.85□□□□□ -1.47
SMG9-207ENST00000598860 ACYP1P07311 99 aa5.85□□□□□ -1.47
SMG9-207ENST00000598860 LCE1FQ5T754 118 aa5.84□□□□□ -1.47
SMG9-207ENST00000598860 LCE1EQ5T753 118 aa5.83□□□□□ -1.48
SMG9-207ENST00000598860 FP248Q71RG6 208 aaPredicted RBP5.83□□□□□ -1.48
SMG9-207ENST00000598860 NREPQ16612 68 aa5.82□□□□□ -1.48
SMG9-207ENST00000598860 UBL5Q9BZL1 73 aa5.82□□□□□ -1.48
SMG9-207ENST00000598860 J3KT08 172 aa5.81□□□□□ -1.48
SMG9-207ENST00000598860 C1orf195Q5TG92 126 aa5.81□□□□□ -1.48
SMG9-207ENST00000598860 LINC00846Q9NV44 126 aa5.8□□□□□ -1.48
SMG9-207ENST00000598860 SEC61GP60059 68 aa5.79□□□□□ -1.48
SMG9-207ENST00000598860 Q96NJ1 140 aa5.79□□□□□ -1.48
SMG9-207ENST00000598860 LINC00472Q9H8W2 130 aa5.79□□□□□ -1.48
SMG9-207ENST00000598860 K7ERU9 68 aa5.78□□□□□ -1.48
SMG9-207ENST00000598860 RETNLBQ9BQ08 111 aa5.78□□□□□ -1.48
SMG9-207ENST00000598860 UBR4Q5T4S7 5183 aa5.77□□□□□ -1.49
SMG9-207ENST00000598860 IGKV4-1P06312 121 aa5.77□□□□□ -1.49
SMG9-207ENST00000598860 SIGMAR1Q99720 223 aa5.77□□□□□ -1.49
SMG9-207ENST00000598860 DSCR10P59022 87 aa5.76□□□□□ -1.49
SMG9-207ENST00000598860 LRP2P98164 4655 aa5.76□□□□□ -1.49
SMG9-207ENST00000598860 BPY2O14599 106 aa5.75□□□□□ -1.49
SMG9-207ENST00000598860 NDUFB1O75438 58 aa5.74□□□□□ -1.49
SMG9-207ENST00000598860 ATP5EP2Q5VTU8 51 aa5.74□□□□□ -1.49
SMG9-207ENST00000598860 A8MWP4 228 aa5.73□□□□□ -1.49
SMG9-207ENST00000598860 DEFB116Q30KQ4 102 aa5.72□□□□□ -1.49
SMG9-207ENST00000598860 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
SMG9-207ENST00000598860 TPRXLQ17RH7 258 aa5.71□□□□□ -1.5
SMG9-207ENST00000598860 LINC00643Q86TS7 51 aa5.71□□□□□ -1.5
SMG9-207ENST00000598860 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
SMG9-207ENST00000598860 C8orf87E5RJ46 101 aa5.7□□□□□ -1.5
SMG9-207ENST00000598860 KRTAP13-3Q3SY46 172 aa5.68□□□□□ -1.5
SMG9-207ENST00000598860 PRR15Q8IV56 129 aa5.68□□□□□ -1.5
SMG9-207ENST00000598860 IGHV6-1A0A0B4J1U7 121 aa5.67□□□□□ -1.5
SMG9-207ENST00000598860 IGKV3D-7A0A0C4DH55 119 aa5.67□□□□□ -1.5
SMG9-207ENST00000598860 LPAP08519 4548 aa5.66□□□□□ -1.5
SMG9-207ENST00000598860 K7EQZ3 153 aa5.66□□□□□ -1.5
SMG9-207ENST00000598860 LINC00313P59037 77 aa5.66□□□□□ -1.5
SMG9-207ENST00000598860 KRTAP10-5P60370 271 aa5.64□□□□□ -1.51
SMG9-207ENST00000598860 C8orf17Q9NRJ1 99 aa5.64□□□□□ -1.51
SMG9-207ENST00000598860 C9orf92A6NGG3 77 aa5.63□□□□□ -1.51
SMG9-207ENST00000598860 RNF213Q63HN8 5207 aa5.63□□□□□ -1.51
SMG9-207ENST00000598860 MMP24-AS1A0A0U1RRL7 71 aa5.61□□□□□ -1.51
SMG9-207ENST00000598860 Q8N9L7 120 aa5.61□□□□□ -1.51
SMG9-207ENST00000598860 HCG22E2RYF7 251 aa5.6□□□□□ -1.51
SMG9-207ENST00000598860 HIST1H4AP62805 103 aaKnown RBP5.6□□□□□ -1.51
SMG9-207ENST00000598860 TMEM254Q8TBM7 123 aa5.6□□□□□ -1.51
SMG9-207ENST00000598860 hDV103S1A0JD37 113 aa5.59□□□□□ -1.51
SMG9-207ENST00000598860 IMUPQ9GZP8 106 aa5.59□□□□□ -1.51
SMG9-207ENST00000598860 A0A0U1RQV1 116 aa5.58□□□□□ -1.52
SMG9-207ENST00000598860 CASC2Q6XLA1 102 aa5.58□□□□□ -1.52
SMG9-207ENST00000598860 C20orf166-AS1Q96NR2 134 aa5.58□□□□□ -1.52
SMG9-207ENST00000598860 MRPL34Q9BQ48 92 aaKnown RBP5.58□□□□□ -1.52
SMG9-207ENST00000598860 WFDC13Q8IUB5 93 aa5.57□□□□□ -1.52
SMG9-207ENST00000598860 A8MUU9 505 aa5.56□□□□□ -1.52
SMG9-207ENST00000598860 RPL37P61927 97 aaKnown RBP5.56□□□□□ -1.52
SMG9-207ENST00000598860 MT-ATP8P03928 68 aa5.54□□□□□ -1.52
SMG9-207ENST00000598860 A0A087WVE0 104 aa5.52□□□□□ -1.53
SMG9-207ENST00000598860 NDUFS5O43920 106 aa5.51□□□□□ -1.53
SMG9-207ENST00000598860 ATP11AUNQ6ZP68 121 aa5.51□□□□□ -1.53
SMG9-207ENST00000598860 TP53AIP1Q9HCN2 124 aa5.5□□□□□ -1.53
SMG9-207ENST00000598860 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
SMG9-207ENST00000598860 ZCCHC13Q8WW36 166 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms