RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 SPATA8Q6RVD6 105 aa4.71□□□□□ -1.66
FARP1-219ENST00000596580 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
FARP1-219ENST00000596580 XIRP2A4UGR9 3374 aa4.7□□□□□ -1.66
FARP1-219ENST00000596580 CELSR1Q9NYQ6 3014 aa4.7□□□□□ -1.66
FARP1-219ENST00000596580 DMXL1Q9Y485 3027 aa4.69□□□□□ -1.66
FARP1-219ENST00000596580 CYSTM1Q9H1C7 97 aa4.69□□□□□ -1.66
FARP1-219ENST00000596580 FREM2Q5SZK8 3169 aa4.68□□□□□ -1.66
FARP1-219ENST00000596580 KRTAP10-1P60331 282 aa4.67□□□□□ -1.66
FARP1-219ENST00000596580 KRTAP21-3Q3LHN1 58 aa4.65□□□□□ -1.66
FARP1-219ENST00000596580 TENM2Q9NT68 2774 aa4.65□□□□□ -1.66
FARP1-219ENST00000596580 SRRM2Q9UQ35 2752 aaKnown RBP4.65□□□□□ -1.67
FARP1-219ENST00000596580 COL6A3P12111 3177 aa4.64□□□□□ -1.67
FARP1-219ENST00000596580 H3BS24 57 aa4.62□□□□□ -1.67
FARP1-219ENST00000596580 KRTAP10-2P60368 255 aa4.62□□□□□ -1.67
FARP1-219ENST00000596580 Q6ZRN7 208 aaPredicted RBP4.61□□□□□ -1.67
FARP1-219ENST00000596580 ADM2Q7Z4H4 148 aa4.61□□□□□ -1.67
FARP1-219ENST00000596580 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
FARP1-219ENST00000596580 KRTAP13-1Q8IUC0 172 aa4.59□□□□□ -1.67
FARP1-219ENST00000596580 USP34Q70CQ2 3546 aa4.59□□□□□ -1.67
FARP1-219ENST00000596580 NOTCH2NLQ7Z3S9 236 aa4.58□□□□□ -1.68
FARP1-219ENST00000596580 BRCA2P51587 3418 aa4.58□□□□□ -1.68
FARP1-219ENST00000596580 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
FARP1-219ENST00000596580 CELSR3Q9NYQ7 3312 aa4.56□□□□□ -1.68
FARP1-219ENST00000596580 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
FARP1-219ENST00000596580 FBN1P35555 2871 aaKnown RBP4.54□□□□□ -1.68
FARP1-219ENST00000596580 A6NN06 94 aa4.54□□□□□ -1.68
FARP1-219ENST00000596580 A8MUU9 505 aa4.54□□□□□ -1.68
FARP1-219ENST00000596580 CFAP47Q6ZTR5 3102 aa4.54□□□□□ -1.68
FARP1-219ENST00000596580 C20orf166-AS1Q96NR2 134 aa4.52□□□□□ -1.69
FARP1-219ENST00000596580 COL7A1Q02388 2944 aa4.52□□□□□ -1.69
FARP1-219ENST00000596580 KRTAP16-1A8MUX0 517 aa4.51□□□□□ -1.69
FARP1-219ENST00000596580 EYSQ5T1H1 3165 aa4.5□□□□□ -1.69
FARP1-219ENST00000596580 TNP1P09430 55 aa4.5□□□□□ -1.69
FARP1-219ENST00000596580 UNC80Q8N2C7 3258 aa4.48□□□□□ -1.69
FARP1-219ENST00000596580 KRTAP13-2Q52LG2 175 aa4.45□□□□□ -1.7
FARP1-219ENST00000596580 KRTAP7-1Q8IUC3 87 aa4.41□□□□□ -1.7
FARP1-219ENST00000596580 TPRXLQ17RH7 258 aa4.4□□□□□ -1.71
FARP1-219ENST00000596580 KRTAP11-1Q8IUC1 163 aa4.4□□□□□ -1.71
FARP1-219ENST00000596580 VCANP13611 3396 aa4.38□□□□□ -1.71
FARP1-219ENST00000596580 CDH23Q9H251 3354 aa4.37□□□□□ -1.71
FARP1-219ENST00000596580 MEGF8Q7Z7M0 2845 aa4.35□□□□□ -1.71
FARP1-219ENST00000596580 A8MU10 97 aa4.32□□□□□ -1.72
FARP1-219ENST00000596580 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
FARP1-219ENST00000596580 SZT2Q5T011 3432 aa4.32□□□□□ -1.72
FARP1-219ENST00000596580 SPEGQ15772 3267 aa4.31□□□□□ -1.72
FARP1-219ENST00000596580 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
FARP1-219ENST00000596580 XP32Q5T750 250 aa4.29□□□□□ -1.72
FARP1-219ENST00000596580 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
FARP1-219ENST00000596580 DNAH14Q0VDD8 3507 aa4.29□□□□□ -1.72
FARP1-219ENST00000596580 FBN3Q75N90 2809 aa4.28□□□□□ -1.72
FARP1-219ENST00000596580 SPTBN5Q9NRC6 3674 aaKnown RBP4.26□□□□□ -1.73
FARP1-219ENST00000596580 LOC400499M0QZD8 3231 aa4.26□□□□□ -1.73
FARP1-219ENST00000596580 MYO15AQ9UKN7 3530 aa4.24□□□□□ -1.73
FARP1-219ENST00000596580 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
FARP1-219ENST00000596580 OTOGQ6ZRI0 2925 aa4.23□□□□□ -1.73
FARP1-219ENST00000596580 ZFHX3Q15911 3703 aa4.23□□□□□ -1.73
FARP1-219ENST00000596580 H0YAA0 97 aa4.22□□□□□ -1.73
FARP1-219ENST00000596580 P0C880 135 aa4.22□□□□□ -1.73
FARP1-219ENST00000596580 KRTAP13-3Q3SY46 172 aa4.17□□□□□ -1.74
FARP1-219ENST00000596580 NBPF19A0A087WUL8 3843 aa4.16□□□□□ -1.74
FARP1-219ENST00000596580 KRTAP10-8P60410 259 aa4.15□□□□□ -1.74
FARP1-219ENST00000596580 DCHS1Q96JQ0 3298 aa4.14□□□□□ -1.75
FARP1-219ENST00000596580 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
FARP1-219ENST00000596580 TRRAPQ9Y4A5 3859 aa4.05□□□□□ -1.76
FARP1-219ENST00000596580 AKAP9Q99996 3911 aa4.05□□□□□ -1.76
FARP1-219ENST00000596580 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
FARP1-219ENST00000596580 A0A1B0GVY2 172 aa4.01□□□□□ -1.77
FARP1-219ENST00000596580 WDFY3Q8IZQ1 3526 aa3.98□□□□□ -1.77
FARP1-219ENST00000596580 LAMA5O15230 3695 aa3.97□□□□□ -1.77
FARP1-219ENST00000596580 ZFHX4Q86UP3 3567 aa3.96□□□□□ -1.78
FARP1-219ENST00000596580 SPENQ96T58 3664 aaKnown RBP3.96□□□□□ -1.78
FARP1-219ENST00000596580 DMDP11532 3685 aa3.93□□□□□ -1.78
FARP1-219ENST00000596580 KRTAP12-2P59991 146 aa3.89□□□□□ -1.79
FARP1-219ENST00000596580 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
FARP1-219ENST00000596580 VPS13CQ709C8 3753 aa3.88□□□□□ -1.79
FARP1-219ENST00000596580 RELNP78509 3460 aa3.85□□□□□ -1.79
FARP1-219ENST00000596580 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
FARP1-219ENST00000596580 MUC3AQ02505 3323 aa3.84□□□□□ -1.79
FARP1-219ENST00000596580 SMG1Q96Q15 3661 aaKnown RBP3.83□□□□□ -1.8
FARP1-219ENST00000596580 INE1O15225 51 aa3.82□□□□□ -1.8
FARP1-219ENST00000596580 ALMS1Q8TCU4 4167 aa3.79□□□□□ -1.8
FARP1-219ENST00000596580 ASPMQ8IZT6 3477 aa3.77□□□□□ -1.81
FARP1-219ENST00000596580 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
FARP1-219ENST00000596580 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
FARP1-219ENST00000596580 KRTAP3-1Q9BYR8 98 aa3.74□□□□□ -1.81
FARP1-219ENST00000596580 DNAH1Q9P2D7 4330 aa3.73□□□□□ -1.81
FARP1-219ENST00000596580 BSNQ9UPA5 3926 aa3.71□□□□□ -1.82
FARP1-219ENST00000596580 CSMD1Q96PZ7 3565 aa3.69□□□□□ -1.82
FARP1-219ENST00000596580 ANK2Q01484 3957 aa3.69□□□□□ -1.82
FARP1-219ENST00000596580 ZNF469Q96JG9 3925 aaPredicted RBP3.66□□□□□ -1.82
FARP1-219ENST00000596580 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
FARP1-219ENST00000596580 DNAH7Q8WXX0 4024 aa3.63□□□□□ -1.83
FARP1-219ENST00000596580 HECTD4Q9Y4D8 3996 aa3.63□□□□□ -1.83
FARP1-219ENST00000596580 HUWE1Q7Z6Z7 4374 aaKnown RBP3.62□□□□□ -1.83
FARP1-219ENST00000596580 DNAH3Q8TD57 4116 aa3.61□□□□□ -1.83
FARP1-219ENST00000596580 LYSTQ99698 3801 aa3.61□□□□□ -1.83
FARP1-219ENST00000596580 CMYA5Q8N3K9 4069 aa3.61□□□□□ -1.83
FARP1-219ENST00000596580 CUBNO60494 3623 aa3.6□□□□□ -1.83
FARP1-219ENST00000596580 MT1HL1P0DM35 61 aa3.59□□□□□ -1.84
FARP1-219ENST00000596580 ANK3Q12955 4377 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms