RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 OCR1Q9BZK8 76 aa3.27□□□□□ -1.89
LINC00343-204ENST00000596398 TRAV13-2A0A0B4J235 113 aa3.26□□□□□ -1.89
LINC00343-204ENST00000596398 H3BUT2 72 aa3.26□□□□□ -1.89
LINC00343-204ENST00000596398 SEC11CQ9BY50 192 aa3.26□□□□□ -1.89
LINC00343-204ENST00000596398 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
LINC00343-204ENST00000596398 A6NDN8 102 aa3.25□□□□□ -1.89
LINC00343-204ENST00000596398 SS18L2Q9UHA2 77 aa3.25□□□□□ -1.89
LINC00343-204ENST00000596398 FAM236AA0A1B0GUQ0 79 aa3.24□□□□□ -1.89
LINC00343-204ENST00000596398 FAM236BA0A1B0GV22 79 aa3.24□□□□□ -1.89
LINC00343-204ENST00000596398 FAM240AA0A1B0GVK7 77 aa3.24□□□□□ -1.89
LINC00343-204ENST00000596398 ZNF815PA8K554 130 aa3.24□□□□□ -1.89
LINC00343-204ENST00000596398 SERF1AO75920 110 aa3.24□□□□□ -1.89
LINC00343-204ENST00000596398 HIST1H4GQ99525 98 aa3.24□□□□□ -1.89
LINC00343-204ENST00000596398 NHP2Q9NX24 153 aaKnown RBP3.24□□□□□ -1.89
LINC00343-204ENST00000596398 A0A087WSZ3 146 aa3.23□□□□□ -1.89
LINC00343-204ENST00000596398 H1FX-AS1Q4G0G2 97 aa3.23□□□□□ -1.89
LINC00343-204ENST00000596398 Q6ZQY7 126 aa3.23□□□□□ -1.89
LINC00343-204ENST00000596398 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
LINC00343-204ENST00000596398 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
LINC00343-204ENST00000596398 HERVK_113P61574 105 aa3.22□□□□□ -1.89
LINC00343-204ENST00000596398 ZCCHC13Q8WW36 166 aaKnown RBP3.22□□□□□ -1.89
LINC00343-204ENST00000596398 PMCHL2Q9BQD1 86 aa3.22□□□□□ -1.89
LINC00343-204ENST00000596398 IGKV4-1P06312 121 aa3.2□□□□□ -1.9
LINC00343-204ENST00000596398 S100PP25815 95 aa3.2□□□□□ -1.9
LINC00343-204ENST00000596398 PLNP26678 52 aa3.2□□□□□ -1.9
LINC00343-204ENST00000596398 C4orf26Q17RF5 130 aa3.2□□□□□ -1.9
LINC00343-204ENST00000596398 SMIM11BQ8TCY0 68 aa3.2□□□□□ -1.9
LINC00343-204ENST00000596398 IGHV6-1A0A0B4J1U7 121 aa3.19□□□□□ -1.9
LINC00343-204ENST00000596398 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
LINC00343-204ENST00000596398 LINC00575Q6W349 94 aa3.19□□□□□ -1.9
LINC00343-204ENST00000596398 TEN1Q86WV5 123 aa3.19□□□□□ -1.9
LINC00343-204ENST00000596398 TRAPPC1Q9Y5R8 145 aa3.19□□□□□ -1.9
LINC00343-204ENST00000596398 LOC105371267A0A1B0GV96 52 aa3.18□□□□□ -1.9
LINC00343-204ENST00000596398 hADV29S1A0JD25 119 aa3.18□□□□□ -1.9
LINC00343-204ENST00000596398 TIMM17BO60830 172 aa3.18□□□□□ -1.9
LINC00343-204ENST00000596398 DPM2O94777 84 aa3.18□□□□□ -1.9
LINC00343-204ENST00000596398 SNHG12Q9BXW3 62 aa3.18□□□□□ -1.9
LINC00343-204ENST00000596398 IGKCP01834 107 aa3.17□□□□□ -1.9
LINC00343-204ENST00000596398 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
LINC00343-204ENST00000596398 CHCHD1Q96BP2 118 aaKnown RBP3.16□□□□□ -1.9
LINC00343-204ENST00000596398 SNAPINO95295 136 aa3.15□□□□□ -1.91
LINC00343-204ENST00000596398 TTTY13Q9BZ97 58 aa3.15□□□□□ -1.91
LINC00343-204ENST00000596398 HSPB8Q9UJY1 196 aa3.15□□□□□ -1.91
LINC00343-204ENST00000596398 CXCL6P80162 114 aa3.14□□□□□ -1.91
LINC00343-204ENST00000596398 SMIM26A0A096LP01 95 aa3.13□□□□□ -1.91
LINC00343-204ENST00000596398 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
LINC00343-204ENST00000596398 LEPROTL1O95214 131 aa3.12□□□□□ -1.91
LINC00343-204ENST00000596398 MT1XP80297 61 aa3.12□□□□□ -1.91
LINC00343-204ENST00000596398 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.12□□□□□ -1.91
LINC00343-204ENST00000596398 NDUFS5O43920 106 aa3.11□□□□□ -1.91
LINC00343-204ENST00000596398 FABP4P15090 132 aa3.11□□□□□ -1.91
LINC00343-204ENST00000596398 PPDPFLQ8WWR9 84 aa3.11□□□□□ -1.91
LINC00343-204ENST00000596398 C3orf79P0CE67 100 aa3.1□□□□□ -1.91
LINC00343-204ENST00000596398 MUSTN1Q8IVN3 82 aa3.1□□□□□ -1.91
LINC00343-204ENST00000596398 LINC00472Q9H8W2 130 aa3.1□□□□□ -1.91
LINC00343-204ENST00000596398 KLKP1Q107X0 134 aa3.09□□□□□ -1.91
LINC00343-204ENST00000596398 LYRM7Q5U5X0 104 aa3.09□□□□□ -1.91
LINC00343-204ENST00000596398 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
LINC00343-204ENST00000596398 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
LINC00343-204ENST00000596398 A0A1B0GVX0 72 aa3.08□□□□□ -1.92
LINC00343-204ENST00000596398 C8orf87E5RJ46 101 aa3.08□□□□□ -1.92
LINC00343-204ENST00000596398 COA6Q5JTJ3 125 aaKnown RBP3.08□□□□□ -1.92
LINC00343-204ENST00000596398 PRO2289Q9P1D8 64 aa3.08□□□□□ -1.92
LINC00343-204ENST00000596398 TMEM218A2RU14 115 aa3.07□□□□□ -1.92
LINC00343-204ENST00000596398 PSPHP1O15172 72 aa3.07□□□□□ -1.92
LINC00343-204ENST00000596398 MT4P47944 62 aa3.07□□□□□ -1.92
LINC00343-204ENST00000596398 PSMB2P49721 201 aa3.07□□□□□ -1.92
LINC00343-204ENST00000596398 IGKV3D-7A0A0C4DH55 119 aa3.06□□□□□ -1.92
LINC00343-204ENST00000596398 H3BMG7 143 aa3.06□□□□□ -1.92
LINC00343-204ENST00000596398 IFITM1P13164 125 aa3.06□□□□□ -1.92
LINC00343-204ENST00000596398 SCGB1D4Q6XE38 83 aa3.06□□□□□ -1.92
LINC00343-204ENST00000596398 RAB37Q96AX2 223 aa3.06□□□□□ -1.92
LINC00343-204ENST00000596398 PRO0628Q9UI54 55 aa3.06□□□□□ -1.92
LINC00343-204ENST00000596398 COPS9Q8WXC6 57 aa3.05□□□□□ -1.92
LINC00343-204ENST00000596398 C12orf57Q99622 126 aa3.04□□□□□ -1.92
LINC00343-204ENST00000596398 A0A1B0GV72 72 aa3.03□□□□□ -1.92
LINC00343-204ENST00000596398 LCA10Q71F78 164 aa3.03□□□□□ -1.92
LINC00343-204ENST00000596398 DSCR8Q96T75 97 aa3.03□□□□□ -1.92
LINC00343-204ENST00000596398 TRBV7-4A0A0J9YYF1 115 aa3.01□□□□□ -1.93
LINC00343-204ENST00000596398 TRGC2P03986 189 aa3.01□□□□□ -1.93
LINC00343-204ENST00000596398 RBM3P98179 157 aaKnown RBP3.01□□□□□ -1.93
LINC00343-204ENST00000596398 CSAG1Q6PB30 78 aa3.01□□□□□ -1.93
LINC00343-204ENST00000596398 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
LINC00343-204ENST00000596398 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
LINC00343-204ENST00000596398 PRR15Q8IV56 129 aa3□□□□□ -1.93
LINC00343-204ENST00000596398 SYS1-DBNDD2H3BUS1 97 aa2.99□□□□□ -1.93
LINC00343-204ENST00000596398 FABP2P12104 132 aa2.99□□□□□ -1.93
LINC00343-204ENST00000596398 BVES-AS1Q5T3Y7 98 aa2.99□□□□□ -1.93
LINC00343-204ENST00000596398 SMIM20Q8N5G0 67 aa2.99□□□□□ -1.93
LINC00343-204ENST00000596398 S4R3F8 94 aa2.99□□□□□ -1.93
LINC00343-204ENST00000596398 CEND1Q8N111 149 aa2.98□□□□□ -1.93
LINC00343-204ENST00000596398 ANKRD29Q8N6D5 301 aa2.98□□□□□ -1.93
LINC00343-204ENST00000596398 ANAPC13Q9BS18 74 aa2.98□□□□□ -1.93
LINC00343-204ENST00000596398 MP68P56378 58 aa2.97□□□□□ -1.93
LINC00343-204ENST00000596398 PMAIP1Q13794 54 aa2.97□□□□□ -1.93
LINC00343-204ENST00000596398 LINC01545Q5VT33 79 aa2.97□□□□□ -1.93
LINC00343-204ENST00000596398 CRIPTQ9P021 101 aa2.97□□□□□ -1.93
LINC00343-204ENST00000596398 TRACP01848 142 aa2.96□□□□□ -1.94
LINC00343-204ENST00000596398 CCKP06307 115 aa2.96□□□□□ -1.94
LINC00343-204ENST00000596398 YPEL4Q96NS1 127 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms