RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 C1orf195Q5TG92 126 aa7.44□□□□□ -1.22
SHKBP1-209ENST00000595803 Q96NJ1 140 aa7.44□□□□□ -1.22
SHKBP1-209ENST00000595803 MUC2Q02817 5179 aa7.43□□□□□ -1.22
SHKBP1-209ENST00000595803 MT-ATP8P03928 68 aa7.43□□□□□ -1.22
SHKBP1-209ENST00000595803 NDUFB1O75438 58 aa7.41□□□□□ -1.22
SHKBP1-209ENST00000595803 DSCR10P59022 87 aa7.41□□□□□ -1.22
SHKBP1-209ENST00000595803 HIST1H4AP62805 103 aaKnown RBP7.4□□□□□ -1.22
SHKBP1-209ENST00000595803 A8MWP4 228 aa7.39□□□□□ -1.23
SHKBP1-209ENST00000595803 IMUPQ9GZP8 106 aa7.38□□□□□ -1.23
SHKBP1-209ENST00000595803 Q8N9L7 120 aa7.37□□□□□ -1.23
SHKBP1-209ENST00000595803 LPAP08519 4548 aa7.37□□□□□ -1.23
SHKBP1-209ENST00000595803 A0A0U1RQV1 116 aa7.36□□□□□ -1.23
SHKBP1-209ENST00000595803 K7EQZ3 153 aa7.36□□□□□ -1.23
SHKBP1-209ENST00000595803 LCE2AQ5TA79 106 aaPredicted RBP7.36□□□□□ -1.23
SHKBP1-209ENST00000595803 PRR15Q8IV56 129 aa7.35□□□□□ -1.23
SHKBP1-209ENST00000595803 RETNLBQ9BQ08 111 aa7.35□□□□□ -1.23
SHKBP1-209ENST00000595803 A0A1B0GVX0 72 aa7.34□□□□□ -1.23
SHKBP1-209ENST00000595803 IGHV6-1A0A0B4J1U7 121 aa7.33□□□□□ -1.24
SHKBP1-209ENST00000595803 A0A087WVE0 104 aa7.31□□□□□ -1.24
SHKBP1-209ENST00000595803 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
SHKBP1-209ENST00000595803 FP248Q71RG6 208 aaPredicted RBP7.3□□□□□ -1.24
SHKBP1-209ENST00000595803 LINC00313P59037 77 aa7.29□□□□□ -1.24
SHKBP1-209ENST00000595803 C8orf17Q9NRJ1 99 aa7.29□□□□□ -1.24
SHKBP1-209ENST00000595803 HCG22E2RYF7 251 aa7.27□□□□□ -1.25
SHKBP1-209ENST00000595803 PRR4Q16378 134 aa7.27□□□□□ -1.25
SHKBP1-209ENST00000595803 WFDC13Q8IUB5 93 aa7.27□□□□□ -1.25
SHKBP1-209ENST00000595803 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
SHKBP1-209ENST00000595803 IGLV7-46A0A075B6I9 117 aa7.26□□□□□ -1.25
SHKBP1-209ENST00000595803 FSIP2Q5CZC0 6907 aa7.25□□□□□ -1.25
SHKBP1-209ENST00000595803 MMP24-AS1A0A0U1RRL7 71 aa7.25□□□□□ -1.25
SHKBP1-209ENST00000595803 CASC2Q6XLA1 102 aa7.25□□□□□ -1.25
SHKBP1-209ENST00000595803 NOTCH2NLQ7Z3S9 236 aa7.25□□□□□ -1.25
SHKBP1-209ENST00000595803 hDV103S1A0JD37 113 aa7.24□□□□□ -1.25
SHKBP1-209ENST00000595803 SCGB1A1P11684 91 aa7.23□□□□□ -1.25
SHKBP1-209ENST00000595803 FAM236AA0A1B0GUQ0 79 aa7.22□□□□□ -1.25
SHKBP1-209ENST00000595803 FAM236BA0A1B0GV22 79 aa7.22□□□□□ -1.25
SHKBP1-209ENST00000595803 C9orf92A6NGG3 77 aa7.21□□□□□ -1.26
SHKBP1-209ENST00000595803 TMEM254Q8TBM7 123 aa7.21□□□□□ -1.26
SHKBP1-209ENST00000595803 MRPL34Q9BQ48 92 aaKnown RBP7.2□□□□□ -1.26
SHKBP1-209ENST00000595803 NDUFS5O43920 106 aa7.17□□□□□ -1.26
SHKBP1-209ENST00000595803 KRTAP16-1A8MUX0 517 aa7.16□□□□□ -1.26
SHKBP1-209ENST00000595803 ATOX1O00244 68 aa7.15□□□□□ -1.26
SHKBP1-209ENST00000595803 KRTAP13-3Q3SY46 172 aa7.14□□□□□ -1.27
SHKBP1-209ENST00000595803 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
SHKBP1-209ENST00000595803 SMIM20Q8N5G0 67 aa7.13□□□□□ -1.27
SHKBP1-209ENST00000595803 Q8N9P0 234 aaPredicted RBP7.13□□□□□ -1.27
SHKBP1-209ENST00000595803 TPRXLQ17RH7 258 aa7.11□□□□□ -1.27
SHKBP1-209ENST00000595803 TP53AIP1Q9HCN2 124 aa7.11□□□□□ -1.27
SHKBP1-209ENST00000595803 UQCRQO14949 82 aa7.09□□□□□ -1.27
SHKBP1-209ENST00000595803 TRAV7A0A075B6U4 112 aa7.08□□□□□ -1.28
SHKBP1-209ENST00000595803 A8MUU9 505 aa7.08□□□□□ -1.28
SHKBP1-209ENST00000595803 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
SHKBP1-209ENST00000595803 ANAPC13Q9BS18 74 aa7.08□□□□□ -1.28
SHKBP1-209ENST00000595803 OCR1Q9BZK8 76 aa7.08□□□□□ -1.28
SHKBP1-209ENST00000595803 XP32Q5T750 250 aa7.07□□□□□ -1.28
SHKBP1-209ENST00000595803 Q75L30 129 aa7.06□□□□□ -1.28
SHKBP1-209ENST00000595803 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
SHKBP1-209ENST00000595803 C5orf47Q569G3 176 aa7.03□□□□□ -1.28
SHKBP1-209ENST00000595803 RPL37P61927 97 aaKnown RBP7.02□□□□□ -1.29
SHKBP1-209ENST00000595803 ATP11AUNQ6ZP68 121 aa7.02□□□□□ -1.29
SHKBP1-209ENST00000595803 MP68P56378 58 aa7.01□□□□□ -1.29
SHKBP1-209ENST00000595803 ZCCHC13Q8WW36 166 aaKnown RBP7.01□□□□□ -1.29
SHKBP1-209ENST00000595803 H0Y9P7 68 aa7□□□□□ -1.29
SHKBP1-209ENST00000595803 COX7CP15954 63 aa7□□□□□ -1.29
SHKBP1-209ENST00000595803 Q5W150 140 aa7□□□□□ -1.29
SHKBP1-209ENST00000595803 TRAV22A0A0B4J277 110 aa6.99□□□□□ -1.29
SHKBP1-209ENST00000595803 H3BPC8 53 aa6.95□□□□□ -1.3
SHKBP1-209ENST00000595803 LINC00208Q96KT6 92 aa6.95□□□□□ -1.3
SHKBP1-209ENST00000595803 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
SHKBP1-209ENST00000595803 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
SHKBP1-209ENST00000595803 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
SHKBP1-209ENST00000595803 C1orf64Q8NEQ6 169 aa6.93□□□□□ -1.3
SHKBP1-209ENST00000595803 PCP4P48539 62 aa6.92□□□□□ -1.3
SHKBP1-209ENST00000595803 PCOTHQ58A44 107 aa6.92□□□□□ -1.3
SHKBP1-209ENST00000595803 LOC101927531A0A1B0GV80 90 aa6.91□□□□□ -1.3
SHKBP1-209ENST00000595803 IGKV2D-30A0A075B6S6 120 aa6.89□□□□□ -1.31
SHKBP1-209ENST00000595803 CCDC179H3BU77 68 aa6.89□□□□□ -1.31
SHKBP1-209ENST00000595803 IGKV2-30P06310 120 aa6.89□□□□□ -1.31
SHKBP1-209ENST00000595803 SNURFQ9Y675 71 aa6.89□□□□□ -1.31
SHKBP1-209ENST00000595803 C7orf65Q6ZTY9 151 aa6.86□□□□□ -1.31
SHKBP1-209ENST00000595803 CYP4F30PQ9H0H9 118 aa6.86□□□□□ -1.31
SHKBP1-209ENST00000595803 SPINK7P58062 85 aa6.85□□□□□ -1.31
SHKBP1-209ENST00000595803 KLKP1Q107X0 134 aa6.85□□□□□ -1.31
SHKBP1-209ENST00000595803 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.81□□□□□ -1.32
SHKBP1-209ENST00000595803 NDUFC1O43677 76 aa6.81□□□□□ -1.32
SHKBP1-209ENST00000595803 MUC17Q685J3 4493 aa6.8□□□□□ -1.32
SHKBP1-209ENST00000595803 CYSTM1Q9H1C7 97 aa6.76□□□□□ -1.33
SHKBP1-209ENST00000595803 HRES1P13985 223 aa6.75□□□□□ -1.33
SHKBP1-209ENST00000595803 H7BZZ5 65 aa6.74□□□□□ -1.33
SHKBP1-209ENST00000595803 C4orf26Q17RF5 130 aa6.7□□□□□ -1.34
SHKBP1-209ENST00000595803 KRTAP4-1Q9BYQ7 146 aa6.7□□□□□ -1.34
SHKBP1-209ENST00000595803 SPANXA2-OT1Q8N9U9 137 aa6.69□□□□□ -1.34
SHKBP1-209ENST00000595803 RBM12B-AS1Q9P1G2 102 aa6.68□□□□□ -1.34
SHKBP1-209ENST00000595803 COX6B2Q6YFQ2 88 aa6.66□□□□□ -1.34
SHKBP1-209ENST00000595803 TMEM258P61165 79 aa6.65□□□□□ -1.34
SHKBP1-209ENST00000595803 FAM236DA0A1B0GTK5 79 aa6.63□□□□□ -1.35
SHKBP1-209ENST00000595803 FAM236CP0DP71 79 aa6.63□□□□□ -1.35
SHKBP1-209ENST00000595803 MPLKIPQ8TAP9 179 aa6.62□□□□□ -1.35
SHKBP1-209ENST00000595803 ATP5EP56381 51 aaPredicted RBP6.61□□□□□ -1.35
SHKBP1-209ENST00000595803 A8MUN3 132 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms