RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TRBV20-1A0A075B6N2 111 aa5.72□□□□□ -1.49
SHKBP1-206ENST00000595523 LOC110117498A0A087WWA1 95 aa5.72□□□□□ -1.49
SHKBP1-206ENST00000595523 A0A1W2PPM0 123 aa5.72□□□□□ -1.49
SHKBP1-206ENST00000595523 JMJD7-PLA2G4BH0Y9G9 81 aa5.72□□□□□ -1.49
SHKBP1-206ENST00000595523 LINC00313P59037 77 aa5.72□□□□□ -1.49
SHKBP1-206ENST00000595523 F8W1H4 67 aa5.71□□□□□ -1.5
SHKBP1-206ENST00000595523 PCP4P48539 62 aa5.71□□□□□ -1.5
SHKBP1-206ENST00000595523 KRTAP9-2Q9BYQ4 174 aa5.71□□□□□ -1.5
SHKBP1-206ENST00000595523 J3QR89 54 aa5.7□□□□□ -1.5
SHKBP1-206ENST00000595523 C14orf132Q9NPU4 83 aa5.7□□□□□ -1.5
SHKBP1-206ENST00000595523 IGHV6-1A0A0B4J1U7 121 aa5.69□□□□□ -1.5
SHKBP1-206ENST00000595523 SPCS1Q9Y6A9 102 aa5.69□□□□□ -1.5
SHKBP1-206ENST00000595523 A0A1B0GVX0 72 aa5.68□□□□□ -1.5
SHKBP1-206ENST00000595523 C21orf62-AS1Q17RA5 79 aa5.68□□□□□ -1.5
SHKBP1-206ENST00000595523 MTURNQ8N3F0 131 aa5.68□□□□□ -1.5
SHKBP1-206ENST00000595523 SCGB1A1P11684 91 aa5.67□□□□□ -1.5
SHKBP1-206ENST00000595523 A0A1B0GW54 56 aa5.66□□□□□ -1.5
SHKBP1-206ENST00000595523 PDE6GP18545 87 aa5.66□□□□□ -1.5
SHKBP1-206ENST00000595523 H3BT86 120 aa5.65□□□□□ -1.5
SHKBP1-206ENST00000595523 J3KT08 172 aa5.65□□□□□ -1.5
SHKBP1-206ENST00000595523 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.5
SHKBP1-206ENST00000595523 C8orf87E5RJ46 101 aa5.64□□□□□ -1.51
SHKBP1-206ENST00000595523 LORP23490 312 aaPredicted RBP5.62□□□□□ -1.51
SHKBP1-206ENST00000595523 IGKV3D-7A0A0C4DH55 119 aa5.61□□□□□ -1.51
SHKBP1-206ENST00000595523 A8MWP4 228 aa5.61□□□□□ -1.51
SHKBP1-206ENST00000595523 KRTAP10-6P60371 365 aaPredicted RBP5.61□□□□□ -1.51
SHKBP1-206ENST00000595523 SMCPP49901 116 aaPredicted RBP5.6□□□□□ -1.51
SHKBP1-206ENST00000595523 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
SHKBP1-206ENST00000595523 NDUFB1O75438 58 aa5.58□□□□□ -1.52
SHKBP1-206ENST00000595523 NREPQ16612 68 aa5.58□□□□□ -1.52
SHKBP1-206ENST00000595523 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
SHKBP1-206ENST00000595523 Q8N9P0 234 aaPredicted RBP5.58□□□□□ -1.52
SHKBP1-206ENST00000595523 PRO0461Q9UI25 63 aa5.58□□□□□ -1.52
SHKBP1-206ENST00000595523 M0R2T5 61 aa5.57□□□□□ -1.52
SHKBP1-206ENST00000595523 HRES1P13985 223 aa5.57□□□□□ -1.52
SHKBP1-206ENST00000595523 MPLKIPQ8TAP9 179 aa5.57□□□□□ -1.52
SHKBP1-206ENST00000595523 PRR15Q8IV56 129 aa5.56□□□□□ -1.52
SHKBP1-206ENST00000595523 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
SHKBP1-206ENST00000595523 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
SHKBP1-206ENST00000595523 MMP24-AS1A0A0U1RRL7 71 aa5.54□□□□□ -1.52
SHKBP1-206ENST00000595523 K7EQZ3 153 aa5.53□□□□□ -1.52
SHKBP1-206ENST00000595523 Q6ZVQ6 151 aa5.53□□□□□ -1.52
SHKBP1-206ENST00000595523 ETDBQ3ZM63 59 aa5.51□□□□□ -1.53
SHKBP1-206ENST00000595523 BPY2O14599 106 aa5.49□□□□□ -1.53
SHKBP1-206ENST00000595523 SPINK7P58062 85 aa5.49□□□□□ -1.53
SHKBP1-206ENST00000595523 TMEM254Q8TBM7 123 aa5.49□□□□□ -1.53
SHKBP1-206ENST00000595523 MRPL34Q9BQ48 92 aaKnown RBP5.49□□□□□ -1.53
SHKBP1-206ENST00000595523 Q8N9L7 120 aa5.48□□□□□ -1.53
SHKBP1-206ENST00000595523 KRTAP9-6A0A140TA67 174 aa5.47□□□□□ -1.53
SHKBP1-206ENST00000595523 FAM236DA0A1B0GTK5 79 aa5.47□□□□□ -1.53
SHKBP1-206ENST00000595523 FAM240AA0A1B0GVK7 77 aa5.47□□□□□ -1.53
SHKBP1-206ENST00000595523 hDV103S1A0JD37 113 aa5.47□□□□□ -1.53
SHKBP1-206ENST00000595523 FAM236CP0DP71 79 aa5.47□□□□□ -1.53
SHKBP1-206ENST00000595523 LINC00846Q9NV44 126 aa5.47□□□□□ -1.53
SHKBP1-206ENST00000595523 RBM12B-AS1Q9P1G2 102 aa5.47□□□□□ -1.53
SHKBP1-206ENST00000595523 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
SHKBP1-206ENST00000595523 ACYP1P07311 99 aa5.43□□□□□ -1.54
SHKBP1-206ENST00000595523 WFDC13Q8IUB5 93 aa5.42□□□□□ -1.54
SHKBP1-206ENST00000595523 NDUFS5O43920 106 aa5.41□□□□□ -1.54
SHKBP1-206ENST00000595523 Q5W150 140 aa5.41□□□□□ -1.54
SHKBP1-206ENST00000595523 UBL5Q9BZL1 73 aa5.41□□□□□ -1.54
SHKBP1-206ENST00000595523 CASC2Q6XLA1 102 aa5.4□□□□□ -1.54
SHKBP1-206ENST00000595523 IMUPQ9GZP8 106 aa5.4□□□□□ -1.54
SHKBP1-206ENST00000595523 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
SHKBP1-206ENST00000595523 MT2AP02795 61 aa5.38□□□□□ -1.55
SHKBP1-206ENST00000595523 HCG22E2RYF7 251 aa5.37□□□□□ -1.55
SHKBP1-206ENST00000595523 USH2AO75445 5202 aa5.35□□□□□ -1.55
SHKBP1-206ENST00000595523 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
SHKBP1-206ENST00000595523 MT-ATP8P03928 68 aa5.34□□□□□ -1.55
SHKBP1-206ENST00000595523 MT1FP04733 61 aa5.34□□□□□ -1.55
SHKBP1-206ENST00000595523 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
SHKBP1-206ENST00000595523 CXCL6P80162 114 aa5.32□□□□□ -1.56
SHKBP1-206ENST00000595523 C7orf65Q6ZTY9 151 aa5.32□□□□□ -1.56
SHKBP1-206ENST00000595523 SSPOA2VEC9 5147 aa5.31□□□□□ -1.56
SHKBP1-206ENST00000595523 LINC00643Q86TS7 51 aa5.31□□□□□ -1.56
SHKBP1-206ENST00000595523 ANAPC13Q9BS18 74 aa5.31□□□□□ -1.56
SHKBP1-206ENST00000595523 H1FX-AS1Q4G0G2 97 aa5.28□□□□□ -1.56
SHKBP1-206ENST00000595523 KRTAP9-3Q9BYQ3 159 aa5.28□□□□□ -1.56
SHKBP1-206ENST00000595523 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
SHKBP1-206ENST00000595523 LCE2BO14633 110 aa5.25□□□□□ -1.57
SHKBP1-206ENST00000595523 C4orf26Q17RF5 130 aa5.25□□□□□ -1.57
SHKBP1-206ENST00000595523 TP53AIP1Q9HCN2 124 aa5.23□□□□□ -1.57
SHKBP1-206ENST00000595523 ATP5EP2Q5VTU8 51 aa5.22□□□□□ -1.57
SHKBP1-206ENST00000595523 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
SHKBP1-206ENST00000595523 ATOX1O00244 68 aa5.19□□□□□ -1.58
SHKBP1-206ENST00000595523 UQCRQO14949 82 aa5.19□□□□□ -1.58
SHKBP1-206ENST00000595523 HIST1H4AP62805 103 aaKnown RBP5.19□□□□□ -1.58
SHKBP1-206ENST00000595523 SVIPQ8NHG7 77 aa5.17□□□□□ -1.58
SHKBP1-206ENST00000595523 TRAV22A0A0B4J277 110 aa5.15□□□□□ -1.59
SHKBP1-206ENST00000595523 FAM236AA0A1B0GUQ0 79 aa5.15□□□□□ -1.59
SHKBP1-206ENST00000595523 FAM236BA0A1B0GV22 79 aa5.15□□□□□ -1.59
SHKBP1-206ENST00000595523 C1orf64Q8NEQ6 169 aa5.15□□□□□ -1.59
SHKBP1-206ENST00000595523 A0A087WVE0 104 aa5.14□□□□□ -1.59
SHKBP1-206ENST00000595523 COX7CP15954 63 aa5.14□□□□□ -1.59
SHKBP1-206ENST00000595523 CYP4F30PQ9H0H9 118 aa5.14□□□□□ -1.59
SHKBP1-206ENST00000595523 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
SHKBP1-206ENST00000595523 CCDC179H3BU77 68 aa5.13□□□□□ -1.59
SHKBP1-206ENST00000595523 RPS28P62857 69 aaKnown RBP5.13□□□□□ -1.59
SHKBP1-206ENST00000595523 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
SHKBP1-206ENST00000595523 C5orf47Q569G3 176 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms