RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 USP34Q70CQ2 3546 aa1.62□□□□□ -2.15
SOX2-OT-219ENST00000593330 PIGYQ3MUY2 71 aa1.62□□□□□ -2.15
SOX2-OT-219ENST00000593330 WDR87Q6ZQQ6 2873 aa1.62□□□□□ -2.15
SOX2-OT-219ENST00000593330 COL6A6A6NMZ7 2263 aa1.61□□□□□ -2.15
SOX2-OT-219ENST00000593330 RIF1Q5UIP0 2472 aaKnown RBP1.61□□□□□ -2.15
SOX2-OT-219ENST00000593330 H0YAA0 97 aa1.61□□□□□ -2.15
SOX2-OT-219ENST00000593330 WFDC13Q8IUB5 93 aa1.61□□□□□ -2.15
SOX2-OT-219ENST00000593330 ITPR1Q14643 2758 aa1.61□□□□□ -2.15
SOX2-OT-219ENST00000593330 IGF2RP11717 2491 aa1.61□□□□□ -2.15
SOX2-OT-219ENST00000593330 ROS1P08922 2347 aa1.61□□□□□ -2.15
SOX2-OT-219ENST00000593330 EP300Q09472 2414 aaPredicted RBP1.6□□□□□ -2.15
SOX2-OT-219ENST00000593330 CACNA1EQ15878 2313 aa1.6□□□□□ -2.15
SOX2-OT-219ENST00000593330 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.6□□□□□ -2.15
SOX2-OT-219ENST00000593330 CCL22O00626 93 aa1.6□□□□□ -2.15
SOX2-OT-219ENST00000593330 COX6A2Q02221 97 aa1.6□□□□□ -2.15
SOX2-OT-219ENST00000593330 WFDC10BQ8IUB3 73 aa1.6□□□□□ -2.15
SOX2-OT-219ENST00000593330 EPPK1P58107 5090 aaKnown RBP1.6□□□□□ -2.15
SOX2-OT-219ENST00000593330 DCHS1Q96JQ0 3298 aa1.59□□□□□ -2.15
SOX2-OT-219ENST00000593330 IGLV5-48A0A075B6I7 105 aa1.59□□□□□ -2.15
SOX2-OT-219ENST00000593330 RPS27P42677 84 aaKnown RBP1.59□□□□□ -2.15
SOX2-OT-219ENST00000593330 PRCDQ00LT1 54 aa1.59□□□□□ -2.15
SOX2-OT-219ENST00000593330 LEAP2Q969E1 77 aa1.59□□□□□ -2.15
SOX2-OT-219ENST00000593330 PTPRQQ9UMZ3 2332 aa1.58□□□□□ -2.16
SOX2-OT-219ENST00000593330 BOD1L1Q8NFC6 3051 aa1.58□□□□□ -2.16
SOX2-OT-219ENST00000593330 HIVEP3Q5T1R4 2406 aa1.58□□□□□ -2.16
SOX2-OT-219ENST00000593330 PRO0255Q9UI72 69 aa1.58□□□□□ -2.16
SOX2-OT-219ENST00000593330 CSMD1Q96PZ7 3565 aa1.58□□□□□ -2.16
SOX2-OT-219ENST00000593330 AKAP13Q12802 2813 aa1.57□□□□□ -2.16
SOX2-OT-219ENST00000593330 FAM186AA6NE01 2351 aa1.57□□□□□ -2.16
SOX2-OT-219ENST00000593330 RYR2Q92736 4967 aa1.57□□□□□ -2.16
SOX2-OT-219ENST00000593330 DOPEY2Q9Y3R5 2298 aa1.56□□□□□ -2.16
SOX2-OT-219ENST00000593330 LAMA3Q16787 3333 aa1.56□□□□□ -2.16
SOX2-OT-219ENST00000593330 ABCA13Q86UQ4 5058 aa1.56□□□□□ -2.16
SOX2-OT-219ENST00000593330 SMG1Q96Q15 3661 aaKnown RBP1.56□□□□□ -2.16
SOX2-OT-219ENST00000593330 FRYQ5TBA9 3013 aa1.56□□□□□ -2.16
SOX2-OT-219ENST00000593330 TENM2Q9NT68 2774 aa1.55□□□□□ -2.16
SOX2-OT-219ENST00000593330 CELSR2Q9HCU4 2923 aa1.55□□□□□ -2.16
SOX2-OT-219ENST00000593330 H1FX-AS1Q4G0G2 97 aa1.55□□□□□ -2.16
SOX2-OT-219ENST00000593330 KAAG1Q9UBP8 84 aa1.55□□□□□ -2.16
SOX2-OT-219ENST00000593330 CDH23Q9H251 3354 aa1.55□□□□□ -2.16
SOX2-OT-219ENST00000593330 ZANQ9Y493 2812 aa1.54□□□□□ -2.16
SOX2-OT-219ENST00000593330 LELP1Q5T871 98 aa1.54□□□□□ -2.16
SOX2-OT-219ENST00000593330 TGP01266 2768 aa1.54□□□□□ -2.16
SOX2-OT-219ENST00000593330 CRYBG3Q68DQ2 2970 aa1.54□□□□□ -2.16
SOX2-OT-219ENST00000593330 PRUNE2Q8WUY3 3088 aa1.54□□□□□ -2.16
SOX2-OT-219ENST00000593330 KMT2CQ8NEZ4 4911 aaKnown RBP1.54□□□□□ -2.16
SOX2-OT-219ENST00000593330 M0QY20 66 aa1.53□□□□□ -2.16
SOX2-OT-219ENST00000593330 DEFB130BP0DP73 79 aa1.53□□□□□ -2.16
SOX2-OT-219ENST00000593330 DEFB130AP0DP74 79 aa1.53□□□□□ -2.16
SOX2-OT-219ENST00000593330 NBEAQ8NFP9 2946 aa1.53□□□□□ -2.16
SOX2-OT-219ENST00000593330 MACF1Q9UPN3 7388 aaKnown RBP1.53□□□□□ -2.16
SOX2-OT-219ENST00000593330 MGAM2Q2M2H8 2515 aa1.52□□□□□ -2.17
SOX2-OT-219ENST00000593330 KNL1Q8NG31 2342 aa1.52□□□□□ -2.17
SOX2-OT-219ENST00000593330 FSIP2Q5CZC0 6907 aa1.52□□□□□ -2.17
SOX2-OT-219ENST00000593330 NSD1Q96L73 2696 aaPredicted RBP1.52□□□□□ -2.17
SOX2-OT-219ENST00000593330 DEFB131AP59861 70 aa1.52□□□□□ -2.17
SOX2-OT-219ENST00000593330 XIRP2A4UGR9 3374 aa1.52□□□□□ -2.17
SOX2-OT-219ENST00000593330 VPS13AQ96RL7 3174 aa1.51□□□□□ -2.17
SOX2-OT-219ENST00000593330 NEBP20929 6669 aa1.51□□□□□ -2.17
SOX2-OT-219ENST00000593330 MMP24-AS1A0A0U1RRL7 71 aa1.51□□□□□ -2.17
SOX2-OT-219ENST00000593330 Q5VSD8 79 aa1.51□□□□□ -2.17
SOX2-OT-219ENST00000593330 ZZEF1O43149 2961 aa1.51□□□□□ -2.17
SOX2-OT-219ENST00000593330 DNAH14Q0VDD8 3507 aa1.51□□□□□ -2.17
SOX2-OT-219ENST00000593330 HERC1Q15751 4861 aa1.51□□□□□ -2.17
SOX2-OT-219ENST00000593330 MEGF8Q7Z7M0 2845 aa1.5□□□□□ -2.17
SOX2-OT-219ENST00000593330 SPRR1AP35321 89 aa1.5□□□□□ -2.17
SOX2-OT-219ENST00000593330 APLNQ9ULZ1 77 aa1.5□□□□□ -2.17
SOX2-OT-219ENST00000593330 F8P00451 2351 aa1.5□□□□□ -2.17
SOX2-OT-219ENST00000593330 SYNE2Q8WXH0 6885 aaKnown RBP1.49□□□□□ -2.17
SOX2-OT-219ENST00000593330 CELSR1Q9NYQ6 3014 aa1.49□□□□□ -2.17
SOX2-OT-219ENST00000593330 WT1-ASQ06250 92 aa1.49□□□□□ -2.17
SOX2-OT-219ENST00000593330 TENM3Q9P273 2699 aa1.49□□□□□ -2.17
SOX2-OT-219ENST00000593330 BSNQ9UPA5 3926 aa1.48□□□□□ -2.17
SOX2-OT-219ENST00000593330 CACNA1HO95180 2353 aa1.48□□□□□ -2.17
SOX2-OT-219ENST00000593330 WNK1Q9H4A3 2382 aa1.48□□□□□ -2.17
SOX2-OT-219ENST00000593330 DSPP15924 2871 aaKnown RBP1.48□□□□□ -2.17
SOX2-OT-219ENST00000593330 DEFB106AQ8N104 65 aa1.48□□□□□ -2.17
SOX2-OT-219ENST00000593330 DEFB105AQ8NG35 78 aa1.48□□□□□ -2.17
SOX2-OT-219ENST00000593330 TMEM167AQ8TBQ9 72 aa1.48□□□□□ -2.17
SOX2-OT-219ENST00000593330 TOMM7Q9P0U1 55 aa1.48□□□□□ -2.17
SOX2-OT-219ENST00000593330 MXRA5Q9NR99 2828 aa1.48□□□□□ -2.17
SOX2-OT-219ENST00000593330 HERC2O95714 4834 aa1.47□□□□□ -2.17
SOX2-OT-219ENST00000593330 WNK2Q9Y3S1 2297 aa1.47□□□□□ -2.17
SOX2-OT-219ENST00000593330 H3BUA1 57 aa1.47□□□□□ -2.17
SOX2-OT-219ENST00000593330 ALMS1Q8TCU4 4167 aa1.47□□□□□ -2.17
SOX2-OT-219ENST00000593330 LRBAP50851 2863 aa1.46□□□□□ -2.18
SOX2-OT-219ENST00000593330 FRYLO94915 3013 aa1.46□□□□□ -2.18
SOX2-OT-219ENST00000593330 A8MTW9 85 aa1.46□□□□□ -2.18
SOX2-OT-219ENST00000593330 DEFB104AQ8WTQ1 72 aa1.46□□□□□ -2.18
SOX2-OT-219ENST00000593330 LOC400499M0QZD8 3231 aa1.46□□□□□ -2.18
SOX2-OT-219ENST00000593330 WDFY3Q8IZQ1 3526 aa1.46□□□□□ -2.18
SOX2-OT-219ENST00000593330 PLCE1Q9P212 2302 aa1.45□□□□□ -2.18
SOX2-OT-219ENST00000593330 COL12A1Q99715 3063 aa1.45□□□□□ -2.18
SOX2-OT-219ENST00000593330 NBPF19A0A087WUL8 3843 aa1.45□□□□□ -2.18
SOX2-OT-219ENST00000593330 SPRR1BP22528 89 aa1.45□□□□□ -2.18
SOX2-OT-219ENST00000593330 PRLHP81277 87 aa1.45□□□□□ -2.18
SOX2-OT-219ENST00000593330 FAT4Q6V0I7 4981 aa1.44□□□□□ -2.18
SOX2-OT-219ENST00000593330 K7EIM0 57 aa1.44□□□□□ -2.18
SOX2-OT-219ENST00000593330 DEFB109BQ30KR1 87 aa1.44□□□□□ -2.18
SOX2-OT-219ENST00000593330 CLPSL2Q6UWE3 100 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms