RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 KLKP1Q107X0 134 aa6.91□□□□□ -1.3
NPC1-214ENST00000593280 Q5XG85 94 aa6.91□□□□□ -1.3
NPC1-214ENST00000593280 TMEM254Q8TBM7 123 aa6.91□□□□□ -1.3
NPC1-214ENST00000593280 LIMD2Q9BT23 127 aa6.91□□□□□ -1.3
NPC1-214ENST00000593280 C8orf17Q9NRJ1 99 aa6.91□□□□□ -1.3
NPC1-214ENST00000593280 hDV103S1A0JD37 113 aa6.9□□□□□ -1.3
NPC1-214ENST00000593280 C4orf48Q5BLP8 95 aa6.9□□□□□ -1.3
NPC1-214ENST00000593280 SNURFQ9Y675 71 aa6.9□□□□□ -1.3
NPC1-214ENST00000593280 HERC2O95714 4834 aa6.9□□□□□ -1.3
NPC1-214ENST00000593280 PKHD1L1Q86WI1 4243 aa6.89□□□□□ -1.31
NPC1-214ENST00000593280 HSPG2P98160 4391 aa6.89□□□□□ -1.31
NPC1-214ENST00000593280 PRR26Q8N8Z3 221 aa6.89□□□□□ -1.31
NPC1-214ENST00000593280 TMEM258P61165 79 aa6.88□□□□□ -1.31
NPC1-214ENST00000593280 A0A0U1RQV1 116 aa6.87□□□□□ -1.31
NPC1-214ENST00000593280 SPINK1P00995 79 aa6.87□□□□□ -1.31
NPC1-214ENST00000593280 C5orf47Q569G3 176 aa6.87□□□□□ -1.31
NPC1-214ENST00000593280 RYR1P21817 5038 aa6.86□□□□□ -1.31
NPC1-214ENST00000593280 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
NPC1-214ENST00000593280 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
NPC1-214ENST00000593280 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
NPC1-214ENST00000593280 NDUFC1O43677 76 aa6.85□□□□□ -1.31
NPC1-214ENST00000593280 H7BZZ5 65 aa6.84□□□□□ -1.31
NPC1-214ENST00000593280 C8orf87E5RJ46 101 aa6.83□□□□□ -1.32
NPC1-214ENST00000593280 SPAG11AQ6PDA7 123 aa6.83□□□□□ -1.32
NPC1-214ENST00000593280 MP68P56378 58 aa6.83□□□□□ -1.32
NPC1-214ENST00000593280 RPS29P62273 56 aaKnown RBP6.83□□□□□ -1.32
NPC1-214ENST00000593280 NOTCH2NLQ7Z3S9 236 aa6.83□□□□□ -1.32
NPC1-214ENST00000593280 MRPL34Q9BQ48 92 aaKnown RBP6.83□□□□□ -1.32
NPC1-214ENST00000593280 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
NPC1-214ENST00000593280 TP53AIP1Q9HCN2 124 aa6.81□□□□□ -1.32
NPC1-214ENST00000593280 H0Y9P7 68 aa6.8□□□□□ -1.32
NPC1-214ENST00000593280 NDUFS5O43920 106 aa6.8□□□□□ -1.32
NPC1-214ENST00000593280 Q5VSD8 79 aa6.8□□□□□ -1.32
NPC1-214ENST00000593280 TRAV22A0A0B4J277 110 aa6.79□□□□□ -1.32
NPC1-214ENST00000593280 FAM236DA0A1B0GTK5 79 aa6.79□□□□□ -1.32
NPC1-214ENST00000593280 FAM236CP0DP71 79 aa6.79□□□□□ -1.32
NPC1-214ENST00000593280 ZCCHC13Q8WW36 166 aaKnown RBP6.79□□□□□ -1.32
NPC1-214ENST00000593280 H3BPC8 53 aa6.78□□□□□ -1.32
NPC1-214ENST00000593280 LINC00313P59037 77 aa6.78□□□□□ -1.32
NPC1-214ENST00000593280 PCLOQ9Y6V0 5065 aa6.78□□□□□ -1.32
NPC1-214ENST00000593280 LINC00208Q96KT6 92 aa6.76□□□□□ -1.33
NPC1-214ENST00000593280 ATP5EP56381 51 aaPredicted RBP6.74□□□□□ -1.33
NPC1-214ENST00000593280 C1orf64Q8NEQ6 169 aa6.73□□□□□ -1.33
NPC1-214ENST00000593280 LRP1Q07954 4544 aaKnown RBP6.71□□□□□ -1.33
NPC1-214ENST00000593280 KRTAP16-1A8MUX0 517 aa6.7□□□□□ -1.34
NPC1-214ENST00000593280 Q8N9P0 234 aaPredicted RBP6.69□□□□□ -1.34
NPC1-214ENST00000593280 FAT3Q8TDW7 4589 aa6.69□□□□□ -1.34
NPC1-214ENST00000593280 RPS28P62857 69 aaKnown RBP6.68□□□□□ -1.34
NPC1-214ENST00000593280 TNXBP22105 4242 aa6.68□□□□□ -1.34
NPC1-214ENST00000593280 Q8N1X5 172 aa6.67□□□□□ -1.34
NPC1-214ENST00000593280 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
NPC1-214ENST00000593280 Q5W150 140 aa6.66□□□□□ -1.34
NPC1-214ENST00000593280 KRTAP4-5Q9BYR2 181 aa6.66□□□□□ -1.34
NPC1-214ENST00000593280 SERP1Q9Y6X1 66 aa6.66□□□□□ -1.34
NPC1-214ENST00000593280 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.34
NPC1-214ENST00000593280 LOC101927531A0A1B0GV80 90 aa6.63□□□□□ -1.35
NPC1-214ENST00000593280 RETNLBQ9BQ08 111 aa6.63□□□□□ -1.35
NPC1-214ENST00000593280 ABCA13Q86UQ4 5058 aa6.63□□□□□ -1.35
NPC1-214ENST00000593280 SPANXA2-OT1Q8N9U9 137 aa6.62□□□□□ -1.35
NPC1-214ENST00000593280 OXTP01178 125 aa6.61□□□□□ -1.35
NPC1-214ENST00000593280 PCOTHQ58A44 107 aa6.61□□□□□ -1.35
NPC1-214ENST00000593280 PRR4Q16378 134 aa6.6□□□□□ -1.35
NPC1-214ENST00000593280 CYP4F30PQ9H0H9 118 aa6.6□□□□□ -1.35
NPC1-214ENST00000593280 C9orf92A6NGG3 77 aa6.59□□□□□ -1.35
NPC1-214ENST00000593280 MYCBP2O75592 4640 aa6.59□□□□□ -1.35
NPC1-214ENST00000593280 FLG2Q5D862 2391 aaPredicted RBP6.57□□□□□ -1.36
NPC1-214ENST00000593280 IGLV7-46A0A075B6I9 117 aa6.55□□□□□ -1.36
NPC1-214ENST00000593280 IGKV2-30P06310 120 aa6.54□□□□□ -1.36
NPC1-214ENST00000593280 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
NPC1-214ENST00000593280 A8MUU9 505 aa6.53□□□□□ -1.36
NPC1-214ENST00000593280 FP248Q71RG6 208 aaPredicted RBP6.53□□□□□ -1.36
NPC1-214ENST00000593280 C20orf166-AS1Q96NR2 134 aa6.53□□□□□ -1.36
NPC1-214ENST00000593280 IGKV2D-30A0A075B6S6 120 aa6.5□□□□□ -1.37
NPC1-214ENST00000593280 SMIM26A0A096LP01 95 aa6.5□□□□□ -1.37
NPC1-214ENST00000593280 HRES1P13985 223 aa6.47□□□□□ -1.37
NPC1-214ENST00000593280 LCE2BO14633 110 aa6.47□□□□□ -1.37
NPC1-214ENST00000593280 C7orf65Q6ZTY9 151 aa6.46□□□□□ -1.38
NPC1-214ENST00000593280 Q75L30 129 aa6.46□□□□□ -1.38
NPC1-214ENST00000593280 COA5Q86WW8 74 aa6.44□□□□□ -1.38
NPC1-214ENST00000593280 DMBT1Q9UGM3 2413 aaPredicted RBP6.44□□□□□ -1.38
NPC1-214ENST00000593280 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
NPC1-214ENST00000593280 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
NPC1-214ENST00000593280 ACYP2P14621 99 aa6.39□□□□□ -1.39
NPC1-214ENST00000593280 XP32Q5T750 250 aa6.38□□□□□ -1.39
NPC1-214ENST00000593280 MPLKIPQ8TAP9 179 aa6.38□□□□□ -1.39
NPC1-214ENST00000593280 HERC1Q15751 4861 aa6.37□□□□□ -1.39
NPC1-214ENST00000593280 RPL37P61927 97 aaKnown RBP6.37□□□□□ -1.39
NPC1-214ENST00000593280 ATP11AUNQ6ZP68 121 aa6.36□□□□□ -1.39
NPC1-214ENST00000593280 C4orf26Q17RF5 130 aa6.36□□□□□ -1.39
NPC1-214ENST00000593280 SPINK7P58062 85 aa6.34□□□□□ -1.39
NPC1-214ENST00000593280 Q1T7F1 81 aa6.34□□□□□ -1.39
NPC1-214ENST00000593280 J3QL48 77 aa6.32□□□□□ -1.4
NPC1-214ENST00000593280 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
NPC1-214ENST00000593280 TPRXLQ17RH7 258 aa6.32□□□□□ -1.4
NPC1-214ENST00000593280 V9GYY9 64 aa6.32□□□□□ -1.4
NPC1-214ENST00000593280 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.31□□□□□ -1.4
NPC1-214ENST00000593280 A8MUN3 132 aa6.29□□□□□ -1.4
NPC1-214ENST00000593280 KRTAP9-2Q9BYQ4 174 aa6.28□□□□□ -1.4
NPC1-214ENST00000593280 KRTAP9-6A0A140TA67 174 aa6.26□□□□□ -1.41
NPC1-214ENST00000593280 LPAP08519 4548 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms