RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 MGPP08493 103 aa2.39□□□□□ -2.03
SMAD4-216ENST00000593223 FXYD6Q9H0Q3 95 aa2.39□□□□□ -2.03
SMAD4-216ENST00000593223 WFDC10AQ9H1F0 79 aa2.39□□□□□ -2.03
SMAD4-216ENST00000593223 M0R135 149 aa2.38□□□□□ -2.03
SMAD4-216ENST00000593223 CCL22O00626 93 aa2.38□□□□□ -2.03
SMAD4-216ENST00000593223 Q5VSD8 79 aa2.38□□□□□ -2.03
SMAD4-216ENST00000593223 FAM103A1Q9BTL3 118 aaKnown RBP2.38□□□□□ -2.03
SMAD4-216ENST00000593223 FAT3Q8TDW7 4589 aa2.37□□□□□ -2.03
SMAD4-216ENST00000593223 NBDYA0A0U1RRE5 68 aa2.37□□□□□ -2.03
SMAD4-216ENST00000593223 H3BRN7 92 aa2.37□□□□□ -2.03
SMAD4-216ENST00000593223 M0R2N4 97 aa2.37□□□□□ -2.03
SMAD4-216ENST00000593223 INE1O15225 51 aa2.37□□□□□ -2.03
SMAD4-216ENST00000593223 RPL37AP61513 92 aaKnown RBP2.37□□□□□ -2.03
SMAD4-216ENST00000593223 LINC00322Q6ZN03 302 aaPredicted RBP2.37□□□□□ -2.03
SMAD4-216ENST00000593223 WFDC6Q9BQY6 131 aa2.37□□□□□ -2.03
SMAD4-216ENST00000593223 LOC110117498A0A087WWA1 95 aa2.36□□□□□ -2.03
SMAD4-216ENST00000593223 A0A1B0GUT8 65 aa2.36□□□□□ -2.03
SMAD4-216ENST00000593223 NDUFB1O75438 58 aa2.36□□□□□ -2.03
SMAD4-216ENST00000593223 ZNF137PP52743 207 aa2.36□□□□□ -2.03
SMAD4-216ENST00000593223 FXYD3Q14802 87 aa2.36□□□□□ -2.03
SMAD4-216ENST00000593223 PLAC8Q9NZF1 115 aa2.36□□□□□ -2.03
SMAD4-216ENST00000593223 TNXBP22105 4242 aa2.35□□□□□ -2.03
SMAD4-216ENST00000593223 IGKV2-24A0A0C4DH68 120 aa2.35□□□□□ -2.03
SMAD4-216ENST00000593223 CTXND1A0A1B0GTU2 59 aa2.35□□□□□ -2.03
SMAD4-216ENST00000593223 M0R3E3 92 aa2.35□□□□□ -2.03
SMAD4-216ENST00000593223 COX17Q14061 63 aa2.35□□□□□ -2.03
SMAD4-216ENST00000593223 C5orf56Q8N8D9 126 aa2.35□□□□□ -2.03
SMAD4-216ENST00000593223 SPRR4Q96PI1 79 aa2.35□□□□□ -2.03
SMAD4-216ENST00000593223 SNURFQ9Y675 71 aa2.35□□□□□ -2.03
SMAD4-216ENST00000593223 A0A087WTM6 91 aa2.34□□□□□ -2.03
SMAD4-216ENST00000593223 A0A087WVE0 104 aa2.34□□□□□ -2.03
SMAD4-216ENST00000593223 TRGV4A0A0C4DH28 118 aa2.34□□□□□ -2.03
SMAD4-216ENST00000593223 SMIM4Q8WVI0 70 aa2.34□□□□□ -2.03
SMAD4-216ENST00000593223 IGKV2-29A2NJV5 120 aaPredicted RBP2.33□□□□□ -2.04
SMAD4-216ENST00000593223 S100A3P33764 101 aa2.33□□□□□ -2.04
SMAD4-216ENST00000593223 SSPOA2VEC9 5147 aa2.32□□□□□ -2.04
SMAD4-216ENST00000593223 SMR3BP02814 79 aaPredicted RBP2.32□□□□□ -2.04
SMAD4-216ENST00000593223 FXYD4P59646 89 aa2.32□□□□□ -2.04
SMAD4-216ENST00000593223 NCBP2-AS2Q69YL0 99 aa2.32□□□□□ -2.04
SMAD4-216ENST00000593223 SPATA8Q6RVD6 105 aa2.32□□□□□ -2.04
SMAD4-216ENST00000593223 C10orf99Q6UWK7 81 aa2.32□□□□□ -2.04
SMAD4-216ENST00000593223 SYNE2Q8WXH0 6885 aaKnown RBP2.32□□□□□ -2.04
SMAD4-216ENST00000593223 TRBV30A0A0K0K1B3 111 aa2.31□□□□□ -2.04
SMAD4-216ENST00000593223 H0Y9P7 68 aa2.31□□□□□ -2.04
SMAD4-216ENST00000593223 H3BUX3 64 aa2.31□□□□□ -2.04
SMAD4-216ENST00000593223 SORL1Q92673 2214 aa2.31□□□□□ -2.04
SMAD4-216ENST00000593223 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SMAD4-216ENST00000593223 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.3□□□□□ -2.04
SMAD4-216ENST00000593223 LINC01549A6NIU2 74 aa2.3□□□□□ -2.04
SMAD4-216ENST00000593223 IFI6P09912 130 aa2.3□□□□□ -2.04
SMAD4-216ENST00000593223 PRB3Q04118 309 aaPredicted RBP2.3□□□□□ -2.04
SMAD4-216ENST00000593223 GDF5OSQ5U4N7 250 aa2.3□□□□□ -2.04
SMAD4-216ENST00000593223 COA5Q86WW8 74 aa2.3□□□□□ -2.04
SMAD4-216ENST00000593223 TMEM263Q8WUH6 116 aaKnown RBP2.3□□□□□ -2.04
SMAD4-216ENST00000593223 TXNDC17Q9BRA2 123 aa2.3□□□□□ -2.04
SMAD4-216ENST00000593223 LPAP08519 4548 aa2.29□□□□□ -2.04
SMAD4-216ENST00000593223 KRTAP13-1Q8IUC0 172 aa2.29□□□□□ -2.04
SMAD4-216ENST00000593223 DEFB107AQ8IZN7 70 aa2.29□□□□□ -2.04
SMAD4-216ENST00000593223 ZNF625Q96I27 306 aaPredicted RBP2.29□□□□□ -2.04
SMAD4-216ENST00000593223 LINC00208Q96KT6 92 aa2.29□□□□□ -2.04
SMAD4-216ENST00000593223 TOMM5Q8N4H5 51 aa2.28□□□□□ -2.04
SMAD4-216ENST00000593223 Q96NJ1 140 aa2.28□□□□□ -2.04
SMAD4-216ENST00000593223 TRGV1A0A0A0MS02 117 aa2.27□□□□□ -2.05
SMAD4-216ENST00000593223 TRAV1-2A0A0B4J238 106 aa2.27□□□□□ -2.05
SMAD4-216ENST00000593223 H3BSH0 61 aa2.27□□□□□ -2.05
SMAD4-216ENST00000593223 CAV3P56539 151 aa2.27□□□□□ -2.05
SMAD4-216ENST00000593223 APLNQ9ULZ1 77 aa2.27□□□□□ -2.05
SMAD4-216ENST00000593223 TNCP24821 2201 aa2.26□□□□□ -2.05
SMAD4-216ENST00000593223 TRGV2A0A075B6R0 118 aa2.26□□□□□ -2.05
SMAD4-216ENST00000593223 TRAV21A0A0B4J279 112 aa2.26□□□□□ -2.05
SMAD4-216ENST00000593223 MRPL33O75394 65 aaKnown RBP2.26□□□□□ -2.05
SMAD4-216ENST00000593223 NREPQ16612 68 aa2.26□□□□□ -2.05
SMAD4-216ENST00000593223 C10orf113Q5VZT2 155 aa2.26□□□□□ -2.05
SMAD4-216ENST00000593223 TRBV6-1A0A0K0K1D8 114 aa2.25□□□□□ -2.05
SMAD4-216ENST00000593223 SPINK7P58062 85 aa2.25□□□□□ -2.05
SMAD4-216ENST00000593223 DEFB136Q30KP8 78 aa2.25□□□□□ -2.05
SMAD4-216ENST00000593223 LINC00472Q9H8W2 130 aa2.25□□□□□ -2.05
SMAD4-216ENST00000593223 MACF1Q9UPN3 7388 aaKnown RBP2.24□□□□□ -2.05
SMAD4-216ENST00000593223 NEBP20929 6669 aa2.24□□□□□ -2.05
SMAD4-216ENST00000593223 ACYP2P14621 99 aa2.24□□□□□ -2.05
SMAD4-216ENST00000593223 HAMPP81172 84 aa2.24□□□□□ -2.05
SMAD4-216ENST00000593223 Q6ZQY7 126 aa2.24□□□□□ -2.05
SMAD4-216ENST00000593223 NMES1Q9C002 83 aa2.24□□□□□ -2.05
SMAD4-216ENST00000593223 PRH1P02810 166 aa2.23□□□□□ -2.05
SMAD4-216ENST00000593223 Q6ZRN7 208 aaPredicted RBP2.23□□□□□ -2.05
SMAD4-216ENST00000593223 DEFB104AQ8WTQ1 72 aa2.23□□□□□ -2.05
SMAD4-216ENST00000593223 J3QRE1 110 aa2.22□□□□□ -2.05
SMAD4-216ENST00000593223 ZCCHC13Q8WW36 166 aaKnown RBP2.22□□□□□ -2.05
SMAD4-216ENST00000593223 MT1HL1P0DM35 61 aa2.21□□□□□ -2.06
SMAD4-216ENST00000593223 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
SMAD4-216ENST00000593223 GAFA1Q96PS6 74 aa2.21□□□□□ -2.06
SMAD4-216ENST00000593223 UBL5Q9BZL1 73 aa2.21□□□□□ -2.06
SMAD4-216ENST00000593223 CMC2Q9NRP2 79 aa2.21□□□□□ -2.06
SMAD4-216ENST00000593223 DNAH8Q96JB1 4490 aa2.2□□□□□ -2.06
SMAD4-216ENST00000593223 USH2AO75445 5202 aa2.2□□□□□ -2.06
SMAD4-216ENST00000593223 FCER1GP30273 86 aa2.2□□□□□ -2.06
SMAD4-216ENST00000593223 KRTAP12-3P60328 96 aa2.2□□□□□ -2.06
SMAD4-216ENST00000593223 OBSCN-AS1Q96MR7 158 aa2.2□□□□□ -2.06
SMAD4-216ENST00000593223 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
SMAD4-216ENST00000593223 ENHOQ6UWT2 76 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms