RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
PRKCSH-218ENST00000593053 JMJD7-PLA2G4BH0Y9G9 81 aa6.82□□□□□ -1.32
PRKCSH-218ENST00000593053 Q6ZQT0 140 aa6.82□□□□□ -1.32
PRKCSH-218ENST00000593053 A0A1W2PNM2 257 aa6.81□□□□□ -1.32
PRKCSH-218ENST00000593053 LOC110117498A0A087WWA1 95 aa6.8□□□□□ -1.32
PRKCSH-218ENST00000593053 RBM3P98179 157 aaKnown RBP6.8□□□□□ -1.32
PRKCSH-218ENST00000593053 C20orf166-AS1Q96NR2 134 aa6.8□□□□□ -1.32
PRKCSH-218ENST00000593053 K7ERU9 68 aa6.79□□□□□ -1.32
PRKCSH-218ENST00000593053 CRCT1Q9UGL9 99 aa6.79□□□□□ -1.32
PRKCSH-218ENST00000593053 FLGP20930 4061 aaPredicted RBP6.79□□□□□ -1.32
PRKCSH-218ENST00000593053 A8MUU9 505 aa6.78□□□□□ -1.32
PRKCSH-218ENST00000593053 CCKP06307 115 aa6.78□□□□□ -1.32
PRKCSH-218ENST00000593053 DSCR10P59022 87 aa6.78□□□□□ -1.32
PRKCSH-218ENST00000593053 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
PRKCSH-218ENST00000593053 FAM240AA0A1B0GVK7 77 aa6.74□□□□□ -1.33
PRKCSH-218ENST00000593053 J3QR89 54 aa6.74□□□□□ -1.33
PRKCSH-218ENST00000593053 IGKV4-1P06312 121 aa6.74□□□□□ -1.33
PRKCSH-218ENST00000593053 DSCR8Q96T75 97 aa6.74□□□□□ -1.33
PRKCSH-218ENST00000593053 LINC00846Q9NV44 126 aa6.73□□□□□ -1.33
PRKCSH-218ENST00000593053 LINC00313P59037 77 aa6.72□□□□□ -1.33
PRKCSH-218ENST00000593053 DEFB116Q30KQ4 102 aa6.71□□□□□ -1.34
PRKCSH-218ENST00000593053 VPS25Q9BRG1 176 aa6.71□□□□□ -1.34
PRKCSH-218ENST00000593053 PDE6GP18545 87 aa6.7□□□□□ -1.34
PRKCSH-218ENST00000593053 KRTAP16-1A8MUX0 517 aa6.69□□□□□ -1.34
PRKCSH-218ENST00000593053 NOTCH2NLQ7Z3S9 236 aa6.69□□□□□ -1.34
PRKCSH-218ENST00000593053 LINC00472Q9H8W2 130 aa6.69□□□□□ -1.34
PRKCSH-218ENST00000593053 ACYP1P07311 99 aa6.68□□□□□ -1.34
PRKCSH-218ENST00000593053 IGHV6-1A0A0B4J1U7 121 aa6.66□□□□□ -1.34
PRKCSH-218ENST00000593053 MT-ATP8P03928 68 aa6.66□□□□□ -1.34
PRKCSH-218ENST00000593053 Q6ZVQ6 151 aa6.65□□□□□ -1.34
PRKCSH-218ENST00000593053 C21orf62-AS1Q17RA5 79 aa6.61□□□□□ -1.35
PRKCSH-218ENST00000593053 IGKV3D-7A0A0C4DH55 119 aa6.6□□□□□ -1.35
PRKCSH-218ENST00000593053 FAM236DA0A1B0GTK5 79 aa6.6□□□□□ -1.35
PRKCSH-218ENST00000593053 A0A1B0GVX0 72 aa6.6□□□□□ -1.35
PRKCSH-218ENST00000593053 FAM236CP0DP71 79 aa6.6□□□□□ -1.35
PRKCSH-218ENST00000593053 LINC00643Q86TS7 51 aa6.6□□□□□ -1.35
PRKCSH-218ENST00000593053 C8orf87E5RJ46 101 aa6.59□□□□□ -1.35
PRKCSH-218ENST00000593053 A0A1B0GW54 56 aa6.58□□□□□ -1.36
PRKCSH-218ENST00000593053 HRES1P13985 223 aa6.58□□□□□ -1.36
PRKCSH-218ENST00000593053 KRTAP9-8Q9BYQ0 159 aa6.58□□□□□ -1.36
PRKCSH-218ENST00000593053 UBL5Q9BZL1 73 aa6.58□□□□□ -1.36
PRKCSH-218ENST00000593053 J3KT08 172 aa6.57□□□□□ -1.36
PRKCSH-218ENST00000593053 RBM12B-AS1Q9P1G2 102 aa6.57□□□□□ -1.36
PRKCSH-218ENST00000593053 MPLKIPQ8TAP9 179 aa6.56□□□□□ -1.36
PRKCSH-218ENST00000593053 NREPQ16612 68 aa6.55□□□□□ -1.36
PRKCSH-218ENST00000593053 USH2AO75445 5202 aa6.53□□□□□ -1.36
PRKCSH-218ENST00000593053 NDUFB1O75438 58 aa6.52□□□□□ -1.37
PRKCSH-218ENST00000593053 Q8N9L7 120 aa6.52□□□□□ -1.37
PRKCSH-218ENST00000593053 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
PRKCSH-218ENST00000593053 A0A087WVE0 104 aa6.51□□□□□ -1.37
PRKCSH-218ENST00000593053 BPY2O14599 106 aa6.51□□□□□ -1.37
PRKCSH-218ENST00000593053 ATP5EP2Q5VTU8 51 aa6.51□□□□□ -1.37
PRKCSH-218ENST00000593053 CXCL6P80162 114 aa6.5□□□□□ -1.37
PRKCSH-218ENST00000593053 MT2AP02795 61 aa6.49□□□□□ -1.37
PRKCSH-218ENST00000593053 A8MWP4 228 aa6.48□□□□□ -1.37
PRKCSH-218ENST00000593053 K7EQZ3 153 aa6.48□□□□□ -1.37
PRKCSH-218ENST00000593053 SPINK7P58062 85 aa6.48□□□□□ -1.37
PRKCSH-218ENST00000593053 Q8N9P0 234 aaPredicted RBP6.48□□□□□ -1.37
PRKCSH-218ENST00000593053 C8orf17Q9NRJ1 99 aa6.48□□□□□ -1.37
PRKCSH-218ENST00000593053 SSPOA2VEC9 5147 aa6.47□□□□□ -1.37
PRKCSH-218ENST00000593053 IMUPQ9GZP8 106 aa6.46□□□□□ -1.38
PRKCSH-218ENST00000593053 MT1FP04733 61 aa6.44□□□□□ -1.38
PRKCSH-218ENST00000593053 HIST1H4AP62805 103 aaKnown RBP6.44□□□□□ -1.38
PRKCSH-218ENST00000593053 FAM236AA0A1B0GUQ0 79 aa6.41□□□□□ -1.38
PRKCSH-218ENST00000593053 FAM236BA0A1B0GV22 79 aa6.41□□□□□ -1.38
PRKCSH-218ENST00000593053 KRTAP10-10P60014 251 aa6.41□□□□□ -1.38
PRKCSH-218ENST00000593053 PRR15Q8IV56 129 aa6.41□□□□□ -1.38
PRKCSH-218ENST00000593053 WFDC13Q8IUB5 93 aa6.4□□□□□ -1.38
PRKCSH-218ENST00000593053 MMP24-AS1A0A0U1RRL7 71 aa6.39□□□□□ -1.39
PRKCSH-218ENST00000593053 SCGB1A1P11684 91 aa6.39□□□□□ -1.39
PRKCSH-218ENST00000593053 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
PRKCSH-218ENST00000593053 LCE2BO14633 110 aa6.36□□□□□ -1.39
PRKCSH-218ENST00000593053 TMEM254Q8TBM7 123 aa6.36□□□□□ -1.39
PRKCSH-218ENST00000593053 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
PRKCSH-218ENST00000593053 FCGBPQ9Y6R7 5405 aaPredicted RBP6.35□□□□□ -1.39
PRKCSH-218ENST00000593053 HCG22E2RYF7 251 aa6.34□□□□□ -1.39
PRKCSH-218ENST00000593053 hDV103S1A0JD37 113 aa6.33□□□□□ -1.4
PRKCSH-218ENST00000593053 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.32□□□□□ -1.4
PRKCSH-218ENST00000593053 NDUFS5O43920 106 aa6.32□□□□□ -1.4
PRKCSH-218ENST00000593053 CASC2Q6XLA1 102 aa6.3□□□□□ -1.4
PRKCSH-218ENST00000593053 ATOX1O00244 68 aa6.28□□□□□ -1.4
PRKCSH-218ENST00000593053 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
PRKCSH-218ENST00000593053 OCR1Q9BZK8 76 aa6.28□□□□□ -1.4
PRKCSH-218ENST00000593053 IGKV2D-30A0A075B6S6 120 aa6.26□□□□□ -1.41
PRKCSH-218ENST00000593053 KRTAP9-7A8MTY7 169 aa6.26□□□□□ -1.41
PRKCSH-218ENST00000593053 IGKV2-30P06310 120 aa6.26□□□□□ -1.41
PRKCSH-218ENST00000593053 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
PRKCSH-218ENST00000593053 Q5W150 140 aa6.25□□□□□ -1.41
PRKCSH-218ENST00000593053 ANAPC13Q9BS18 74 aa6.25□□□□□ -1.41
PRKCSH-218ENST00000593053 PCP4P48539 62 aa6.24□□□□□ -1.41
PRKCSH-218ENST00000593053 TRAV7A0A075B6U4 112 aa6.22□□□□□ -1.41
PRKCSH-218ENST00000593053 C7orf65Q6ZTY9 151 aa6.22□□□□□ -1.41
PRKCSH-218ENST00000593053 SERP2Q8N6R1 65 aa6.22□□□□□ -1.41
PRKCSH-218ENST00000593053 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
PRKCSH-218ENST00000593053 COX7CP15954 63 aa6.2□□□□□ -1.42
PRKCSH-218ENST00000593053 CYSTM1Q9H1C7 97 aa6.18□□□□□ -1.42
PRKCSH-218ENST00000593053 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
PRKCSH-218ENST00000593053 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.42
PRKCSH-218ENST00000593053 C4orf26Q17RF5 130 aa6.15□□□□□ -1.42
PRKCSH-218ENST00000593053 UQCRQO14949 82 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms