RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 LINC00846Q9NV44 126 aa10.06□□□□□ -0.8
CROCCP3-205ENST00000591316 J3KT08 172 aa10.05□□□□□ -0.8
CROCCP3-205ENST00000591316 Q6ZVQ6 151 aa10.04□□□□□ -0.8
CROCCP3-205ENST00000591316 XP32Q5T750 250 aa10.03□□□□□ -0.8
CROCCP3-205ENST00000591316 IGHV6-1A0A0B4J1U7 121 aa10.02□□□□□ -0.81
CROCCP3-205ENST00000591316 DSCR10P59022 87 aa10.01□□□□□ -0.81
CROCCP3-205ENST00000591316 UBL5Q9BZL1 73 aa10.01□□□□□ -0.81
CROCCP3-205ENST00000591316 BPY2O14599 106 aa9.99□□□□□ -0.81
CROCCP3-205ENST00000591316 NDUFB1O75438 58 aa9.99□□□□□ -0.81
CROCCP3-205ENST00000591316 LINC00313P59037 77 aa9.99□□□□□ -0.81
CROCCP3-205ENST00000591316 NOTCH2NLQ7Z3S9 236 aa9.98□□□□□ -0.81
CROCCP3-205ENST00000591316 A0A1B0GVX0 72 aa9.97□□□□□ -0.81
CROCCP3-205ENST00000591316 A8MWP4 228 aa9.97□□□□□ -0.81
CROCCP3-205ENST00000591316 IGKV3D-7A0A0C4DH55 119 aa9.95□□□□□ -0.82
CROCCP3-205ENST00000591316 ACYP1P07311 99 aa9.94□□□□□ -0.82
CROCCP3-205ENST00000591316 K7ERU9 68 aa9.93□□□□□ -0.82
CROCCP3-205ENST00000591316 PRR15Q8IV56 129 aa9.91□□□□□ -0.82
CROCCP3-205ENST00000591316 C8orf87E5RJ46 101 aa9.9□□□□□ -0.82
CROCCP3-205ENST00000591316 K7EQZ3 153 aa9.9□□□□□ -0.82
CROCCP3-205ENST00000591316 FAM240AA0A1B0GVK7 77 aa9.89□□□□□ -0.83
CROCCP3-205ENST00000591316 Q8N9L7 120 aa9.89□□□□□ -0.83
CROCCP3-205ENST00000591316 SEC61BP60468 96 aaKnown RBP9.88□□□□□ -0.83
CROCCP3-205ENST00000591316 C8orf17Q9NRJ1 99 aa9.88□□□□□ -0.83
CROCCP3-205ENST00000591316 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
CROCCP3-205ENST00000591316 J3QR89 54 aa9.86□□□□□ -0.83
CROCCP3-205ENST00000591316 LCE2CQ5TA81 110 aa9.86□□□□□ -0.83
CROCCP3-205ENST00000591316 KRTAP16-1A8MUX0 517 aa9.85□□□□□ -0.83
CROCCP3-205ENST00000591316 PCOTHQ58A44 107 aa9.84□□□□□ -0.83
CROCCP3-205ENST00000591316 Q75L30 129 aa9.84□□□□□ -0.83
CROCCP3-205ENST00000591316 MUC17Q685J3 4493 aa9.83□□□□□ -0.84
CROCCP3-205ENST00000591316 C20orf166-AS1Q96NR2 134 aa9.83□□□□□ -0.84
CROCCP3-205ENST00000591316 KRTAP4-8Q9BYQ9 185 aa9.82□□□□□ -0.84
CROCCP3-205ENST00000591316 A8MUU9 505 aa9.81□□□□□ -0.84
CROCCP3-205ENST00000591316 CXCL6P80162 114 aa9.8□□□□□ -0.84
CROCCP3-205ENST00000591316 MMP24-AS1A0A0U1RRL7 71 aa9.8□□□□□ -0.84
CROCCP3-205ENST00000591316 ATP11AUNQ6ZP68 121 aa9.8□□□□□ -0.84
CROCCP3-205ENST00000591316 RNF213Q63HN8 5207 aa9.79□□□□□ -0.84
CROCCP3-205ENST00000591316 hDV103S1A0JD37 113 aa9.77□□□□□ -0.85
CROCCP3-205ENST00000591316 LORP23490 312 aaPredicted RBP9.77□□□□□ -0.85
CROCCP3-205ENST00000591316 WFDC13Q8IUB5 93 aa9.76□□□□□ -0.85
CROCCP3-205ENST00000591316 LINC00643Q86TS7 51 aa9.75□□□□□ -0.85
CROCCP3-205ENST00000591316 MRPL34Q9BQ48 92 aaKnown RBP9.74□□□□□ -0.85
CROCCP3-205ENST00000591316 TMEM254Q8TBM7 123 aa9.73□□□□□ -0.85
CROCCP3-205ENST00000591316 MUC2Q02817 5179 aa9.73□□□□□ -0.85
CROCCP3-205ENST00000591316 CASC2Q6XLA1 102 aa9.72□□□□□ -0.85
CROCCP3-205ENST00000591316 KRTAP4-1Q9BYQ7 146 aa9.72□□□□□ -0.85
CROCCP3-205ENST00000591316 Q8N9P0 234 aaPredicted RBP9.71□□□□□ -0.85
CROCCP3-205ENST00000591316 NDUFS5O43920 106 aa9.71□□□□□ -0.86
CROCCP3-205ENST00000591316 ATP5EP2Q5VTU8 51 aa9.71□□□□□ -0.86
CROCCP3-205ENST00000591316 HCG22E2RYF7 251 aa9.7□□□□□ -0.86
CROCCP3-205ENST00000591316 HIST1H4AP62805 103 aaKnown RBP9.7□□□□□ -0.86
CROCCP3-205ENST00000591316 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
CROCCP3-205ENST00000591316 A0A087WVE0 104 aa9.59□□□□□ -0.87
CROCCP3-205ENST00000591316 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.59□□□□□ -0.87
CROCCP3-205ENST00000591316 KRTAP9-2Q9BYQ4 174 aa9.59□□□□□ -0.87
CROCCP3-205ENST00000591316 KRTAP9-6A0A140TA67 174 aa9.54□□□□□ -0.88
CROCCP3-205ENST00000591316 Q5W150 140 aa9.53□□□□□ -0.88
CROCCP3-205ENST00000591316 MT-ATP8P03928 68 aa9.51□□□□□ -0.89
CROCCP3-205ENST00000591316 SPINK7P58062 85 aa9.48□□□□□ -0.89
CROCCP3-205ENST00000591316 TP53AIP1Q9HCN2 124 aa9.46□□□□□ -0.89
CROCCP3-205ENST00000591316 A0A0U1RQV1 116 aa9.46□□□□□ -0.9
CROCCP3-205ENST00000591316 SCGB1A1P11684 91 aa9.43□□□□□ -0.9
CROCCP3-205ENST00000591316 IMUPQ9GZP8 106 aa9.42□□□□□ -0.9
CROCCP3-205ENST00000591316 IGKV2D-30A0A075B6S6 120 aa9.41□□□□□ -0.9
CROCCP3-205ENST00000591316 IGKV2-30P06310 120 aa9.41□□□□□ -0.9
CROCCP3-205ENST00000591316 FAT4Q6V0I7 4981 aa9.38□□□□□ -0.91
CROCCP3-205ENST00000591316 HRES1P13985 223 aa9.37□□□□□ -0.91
CROCCP3-205ENST00000591316 COX6B2Q6YFQ2 88 aa9.37□□□□□ -0.91
CROCCP3-205ENST00000591316 KRTAP19-2Q3LHN2 52 aa9.37□□□□□ -0.91
CROCCP3-205ENST00000591316 UQCRQO14949 82 aa9.35□□□□□ -0.91
CROCCP3-205ENST00000591316 LCE3BQ5TA77 95 aa9.35□□□□□ -0.91
CROCCP3-205ENST00000591316 PCP4P48539 62 aa9.34□□□□□ -0.91
CROCCP3-205ENST00000591316 C7orf65Q6ZTY9 151 aa9.34□□□□□ -0.91
CROCCP3-205ENST00000591316 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
CROCCP3-205ENST00000591316 TRAV22A0A0B4J277 110 aa9.32□□□□□ -0.92
CROCCP3-205ENST00000591316 OCR1Q9BZK8 76 aa9.31□□□□□ -0.92
CROCCP3-205ENST00000591316 FAM236DA0A1B0GTK5 79 aa9.3□□□□□ -0.92
CROCCP3-205ENST00000591316 FAM236CP0DP71 79 aa9.3□□□□□ -0.92
CROCCP3-205ENST00000591316 FAM236AA0A1B0GUQ0 79 aa9.29□□□□□ -0.92
CROCCP3-205ENST00000591316 FAM236BA0A1B0GV22 79 aa9.29□□□□□ -0.92
CROCCP3-205ENST00000591316 H0Y9P7 68 aa9.29□□□□□ -0.92
CROCCP3-205ENST00000591316 MPLKIPQ8TAP9 179 aa9.29□□□□□ -0.92
CROCCP3-205ENST00000591316 ATOX1O00244 68 aa9.22□□□□□ -0.93
CROCCP3-205ENST00000591316 CYP4F30PQ9H0H9 118 aa9.22□□□□□ -0.93
CROCCP3-205ENST00000591316 LOC101927531A0A1B0GV80 90 aa9.2□□□□□ -0.94
CROCCP3-205ENST00000591316 MP68P56378 58 aa9.2□□□□□ -0.94
CROCCP3-205ENST00000591316 C4orf26Q17RF5 130 aa9.2□□□□□ -0.94
CROCCP3-205ENST00000591316 C5orf47Q569G3 176 aa9.2□□□□□ -0.94
CROCCP3-205ENST00000591316 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
CROCCP3-205ENST00000591316 C1orf64Q8NEQ6 169 aa9.2□□□□□ -0.94
CROCCP3-205ENST00000591316 MT1HP80294 61 aa9.19□□□□□ -0.94
CROCCP3-205ENST00000591316 SMIM20Q8N5G0 67 aa9.15□□□□□ -0.95
CROCCP3-205ENST00000591316 TRAV7A0A075B6U4 112 aa9.14□□□□□ -0.95
CROCCP3-205ENST00000591316 KRTAP4-8A0A0G2JLE6 195 aa9.14□□□□□ -0.95
CROCCP3-205ENST00000591316 M0R2T5 61 aa9.14□□□□□ -0.95
CROCCP3-205ENST00000591316 KRTAP4-12Q9BQ66 201 aa9.13□□□□□ -0.95
CROCCP3-205ENST00000591316 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
CROCCP3-205ENST00000591316 KRTAP9-9Q9BYP9 154 aa9.1□□□□□ -0.95
CROCCP3-205ENST00000591316 KRTAP9-4Q9BYQ2 154 aa9.1□□□□□ -0.95
CROCCP3-205ENST00000591316 FLGP20930 4061 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms