RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 ZNF706Q9Y5V0 76 aaPredicted RBP6.83□□□□□ -1.32
TPM4-213ENST00000591226 DEFB116Q30KQ4 102 aa6.82□□□□□ -1.32
TPM4-213ENST00000591226 SACSQ9NZJ4 4579 aa6.82□□□□□ -1.32
TPM4-213ENST00000591226 C8orf87E5RJ46 101 aa6.82□□□□□ -1.32
TPM4-213ENST00000591226 CHKB-CPT1BH3BT56 60 aa6.82□□□□□ -1.32
TPM4-213ENST00000591226 CDK2AP2O75956 126 aa6.82□□□□□ -1.32
TPM4-213ENST00000591226 ANAPC11Q9NYG5 84 aa6.82□□□□□ -1.32
TPM4-213ENST00000591226 IGLV7-43P04211 117 aa6.81□□□□□ -1.32
TPM4-213ENST00000591226 K7EQZ3 153 aa6.81□□□□□ -1.32
TPM4-213ENST00000591226 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
TPM4-213ENST00000591226 Q6ZSA8 131 aa6.81□□□□□ -1.32
TPM4-213ENST00000591226 HCG22E2RYF7 251 aa6.79□□□□□ -1.32
TPM4-213ENST00000591226 NDUFS5O43920 106 aa6.78□□□□□ -1.32
TPM4-213ENST00000591226 MOBPQ13875 183 aa6.78□□□□□ -1.32
TPM4-213ENST00000591226 LRP1BQ9NZR2 4599 aa6.77□□□□□ -1.33
TPM4-213ENST00000591226 A6NN06 94 aa6.76□□□□□ -1.33
TPM4-213ENST00000591226 RPL37AP61513 92 aaKnown RBP6.76□□□□□ -1.33
TPM4-213ENST00000591226 LCA10Q71F78 164 aa6.76□□□□□ -1.33
TPM4-213ENST00000591226 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
TPM4-213ENST00000591226 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
TPM4-213ENST00000591226 ATP11AUNQ6ZP68 121 aa6.74□□□□□ -1.33
TPM4-213ENST00000591226 PKHD1P08F94 4074 aa6.74□□□□□ -1.33
TPM4-213ENST00000591226 PRR15LQ9BU68 103 aa6.74□□□□□ -1.33
TPM4-213ENST00000591226 LCE6AA0A183 80 aa6.73□□□□□ -1.33
TPM4-213ENST00000591226 LCE2BO14633 110 aa6.72□□□□□ -1.33
TPM4-213ENST00000591226 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
TPM4-213ENST00000591226 A6NED7 52 aa6.71□□□□□ -1.34
TPM4-213ENST00000591226 ZCCHC13Q8WW36 166 aaKnown RBP6.71□□□□□ -1.34
TPM4-213ENST00000591226 CYP4F30PQ9H0H9 118 aa6.71□□□□□ -1.34
TPM4-213ENST00000591226 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
TPM4-213ENST00000591226 A8MWP4 228 aa6.7□□□□□ -1.34
TPM4-213ENST00000591226 Q96NJ1 140 aa6.7□□□□□ -1.34
TPM4-213ENST00000591226 VPS13BQ7Z7G8 4022 aa6.69□□□□□ -1.34
TPM4-213ENST00000591226 WFDC13Q8IUB5 93 aa6.69□□□□□ -1.34
TPM4-213ENST00000591226 Q8N9P0 234 aaPredicted RBP6.69□□□□□ -1.34
TPM4-213ENST00000591226 LIMD2Q9BT23 127 aa6.66□□□□□ -1.34
TPM4-213ENST00000591226 DYNC1H1Q14204 4646 aaKnown RBP6.65□□□□□ -1.34
TPM4-213ENST00000591226 A0A087X002 238 aa6.65□□□□□ -1.34
TPM4-213ENST00000591226 KRTAP29-1A8MX34 341 aaPredicted RBP6.65□□□□□ -1.35
TPM4-213ENST00000591226 CASC2Q6XLA1 102 aa6.64□□□□□ -1.35
TPM4-213ENST00000591226 RYR2Q92736 4967 aa6.64□□□□□ -1.35
TPM4-213ENST00000591226 A0A1B0GVY2 172 aa6.63□□□□□ -1.35
TPM4-213ENST00000591226 NDUFB1O75438 58 aa6.63□□□□□ -1.35
TPM4-213ENST00000591226 KRTAP13-2Q52LG2 175 aa6.63□□□□□ -1.35
TPM4-213ENST00000591226 SSBP3-AS1Q7Z2R9 100 aa6.63□□□□□ -1.35
TPM4-213ENST00000591226 PRAC1Q96KF2 57 aa6.63□□□□□ -1.35
TPM4-213ENST00000591226 MMP24-AS1A0A0U1RRL7 71 aa6.62□□□□□ -1.35
TPM4-213ENST00000591226 LINC00208Q96KT6 92 aa6.62□□□□□ -1.35
TPM4-213ENST00000591226 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
TPM4-213ENST00000591226 KMT2CQ8NEZ4 4911 aaKnown RBP6.61□□□□□ -1.35
TPM4-213ENST00000591226 KRTAP1-4P0C5Y4 121 aa6.61□□□□□ -1.35
TPM4-213ENST00000591226 IGHV6-1A0A0B4J1U7 121 aa6.59□□□□□ -1.35
TPM4-213ENST00000591226 A0A1B0GVX0 72 aa6.59□□□□□ -1.35
TPM4-213ENST00000591226 SPINK6Q6UWN8 80 aa6.58□□□□□ -1.36
TPM4-213ENST00000591226 LINC00313P59037 77 aa6.58□□□□□ -1.36
TPM4-213ENST00000591226 C8orf17Q9NRJ1 99 aa6.57□□□□□ -1.36
TPM4-213ENST00000591226 APOBP04114 4563 aaKnown RBP6.57□□□□□ -1.36
TPM4-213ENST00000591226 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
TPM4-213ENST00000591226 LOC101927531A0A1B0GV80 90 aa6.56□□□□□ -1.36
TPM4-213ENST00000591226 ASB16-AS1Q495Z4 193 aa6.55□□□□□ -1.36
TPM4-213ENST00000591226 LINC01554Q52M75 96 aa6.55□□□□□ -1.36
TPM4-213ENST00000591226 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
TPM4-213ENST00000591226 NOTCH2NLQ7Z3S9 236 aa6.54□□□□□ -1.36
TPM4-213ENST00000591226 FAT1Q14517 4588 aa6.53□□□□□ -1.36
TPM4-213ENST00000591226 MP68P56378 58 aa6.53□□□□□ -1.36
TPM4-213ENST00000591226 H0Y9P7 68 aa6.52□□□□□ -1.37
TPM4-213ENST00000591226 SPINK7P58062 85 aa6.52□□□□□ -1.37
TPM4-213ENST00000591226 TYMSOSQ8TAI1 123 aa6.51□□□□□ -1.37
TPM4-213ENST00000591226 COA5Q86WW8 74 aa6.5□□□□□ -1.37
TPM4-213ENST00000591226 SPAG11AQ6PDA7 123 aa6.5□□□□□ -1.37
TPM4-213ENST00000591226 MRPL34Q9BQ48 92 aaKnown RBP6.49□□□□□ -1.37
TPM4-213ENST00000591226 SPANXA2-OT1Q8N9U9 137 aa6.49□□□□□ -1.37
TPM4-213ENST00000591226 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
TPM4-213ENST00000591226 TP53AIP1Q9HCN2 124 aa6.47□□□□□ -1.37
TPM4-213ENST00000591226 H3BPC8 53 aa6.45□□□□□ -1.38
TPM4-213ENST00000591226 SPINK1P00995 79 aa6.43□□□□□ -1.38
TPM4-213ENST00000591226 RYR3Q15413 4870 aa6.43□□□□□ -1.38
TPM4-213ENST00000591226 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
TPM4-213ENST00000591226 LINC00304Q8N9R0 145 aa6.43□□□□□ -1.38
TPM4-213ENST00000591226 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
TPM4-213ENST00000591226 Q5W150 140 aa6.38□□□□□ -1.39
TPM4-213ENST00000591226 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
TPM4-213ENST00000591226 KRTAP16-1A8MUX0 517 aa6.36□□□□□ -1.39
TPM4-213ENST00000591226 PCOTHQ58A44 107 aa6.36□□□□□ -1.39
TPM4-213ENST00000591226 HSPG2P98160 4391 aa6.36□□□□□ -1.39
TPM4-213ENST00000591226 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
TPM4-213ENST00000591226 KRTAP13-3Q3SY46 172 aa6.36□□□□□ -1.39
TPM4-213ENST00000591226 RETNLBQ9BQ08 111 aa6.36□□□□□ -1.39
TPM4-213ENST00000591226 IGLV7-46A0A075B6I9 117 aa6.35□□□□□ -1.39
TPM4-213ENST00000591226 Q5VSD8 79 aa6.31□□□□□ -1.4
TPM4-213ENST00000591226 CSAG1Q6PB30 78 aa6.31□□□□□ -1.4
TPM4-213ENST00000591226 RYR1P21817 5038 aa6.29□□□□□ -1.4
TPM4-213ENST00000591226 HRES1P13985 223 aa6.28□□□□□ -1.4
TPM4-213ENST00000591226 LRP1Q07954 4544 aaKnown RBP6.28□□□□□ -1.4
TPM4-213ENST00000591226 KRTAP17-1Q9BYP8 105 aa6.26□□□□□ -1.41
TPM4-213ENST00000591226 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
TPM4-213ENST00000591226 TNXBP22105 4242 aa6.25□□□□□ -1.41
TPM4-213ENST00000591226 Q8N1X5 172 aa6.23□□□□□ -1.41
TPM4-213ENST00000591226 C9orf92A6NGG3 77 aa6.23□□□□□ -1.41
TPM4-213ENST00000591226 IGKV2-30P06310 120 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms