RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 VPS25Q9BRG1 176 aa4.58□□□□□ -1.68
NEDD4L-230ENST00000590638 DYNC1H1Q14204 4646 aaKnown RBP4.58□□□□□ -1.68
NEDD4L-230ENST00000590638 SPINK6Q6UWN8 80 aa4.57□□□□□ -1.68
NEDD4L-230ENST00000590638 HERC1Q15751 4861 aa4.57□□□□□ -1.68
NEDD4L-230ENST00000590638 IGFL1Q6UW32 110 aa4.56□□□□□ -1.68
NEDD4L-230ENST00000590638 DNAH8Q96JB1 4490 aa4.55□□□□□ -1.68
NEDD4L-230ENST00000590638 A0A1W2PNM2 257 aa4.55□□□□□ -1.68
NEDD4L-230ENST00000590638 FAM229BQ4G0N7 80 aa4.55□□□□□ -1.68
NEDD4L-230ENST00000590638 C9orf153Q5TBE3 101 aa4.55□□□□□ -1.68
NEDD4L-230ENST00000590638 UBL5Q9BZL1 73 aa4.55□□□□□ -1.68
NEDD4L-230ENST00000590638 LINC00846Q9NV44 126 aa4.55□□□□□ -1.68
NEDD4L-230ENST00000590638 ANAPC11Q9NYG5 84 aa4.55□□□□□ -1.68
NEDD4L-230ENST00000590638 PKHD1P08F94 4074 aa4.55□□□□□ -1.68
NEDD4L-230ENST00000590638 DNAH5Q8TE73 4624 aa4.55□□□□□ -1.68
NEDD4L-230ENST00000590638 CRYGAP11844 174 aa4.54□□□□□ -1.68
NEDD4L-230ENST00000590638 SSBP3-AS1Q7Z2R9 100 aa4.54□□□□□ -1.68
NEDD4L-230ENST00000590638 LINC00643Q86TS7 51 aa4.54□□□□□ -1.68
NEDD4L-230ENST00000590638 KRTAP10-4P60372 401 aaPredicted RBP4.53□□□□□ -1.68
NEDD4L-230ENST00000590638 MOBPQ13875 183 aa4.53□□□□□ -1.68
NEDD4L-230ENST00000590638 Q6Q795 121 aa4.53□□□□□ -1.68
NEDD4L-230ENST00000590638 SIGMAR1Q99720 223 aa4.52□□□□□ -1.69
NEDD4L-230ENST00000590638 A0A0G2JQZ4 141 aa4.51□□□□□ -1.69
NEDD4L-230ENST00000590638 NREPQ16612 68 aa4.51□□□□□ -1.69
NEDD4L-230ENST00000590638 DMBT1Q9UGM3 2413 aaPredicted RBP4.5□□□□□ -1.69
NEDD4L-230ENST00000590638 TRBV7-7A0A0K0K1E9 115 aa4.5□□□□□ -1.69
NEDD4L-230ENST00000590638 HSPG2P98160 4391 aa4.5□□□□□ -1.69
NEDD4L-230ENST00000590638 A0A087WSZ3 146 aa4.49□□□□□ -1.69
NEDD4L-230ENST00000590638 CD164Q04900 197 aa4.49□□□□□ -1.69
NEDD4L-230ENST00000590638 Q5VSD8 79 aa4.49□□□□□ -1.69
NEDD4L-230ENST00000590638 ATP5EP2Q5VTU8 51 aa4.49□□□□□ -1.69
NEDD4L-230ENST00000590638 UBR4Q5T4S7 5183 aa4.49□□□□□ -1.69
NEDD4L-230ENST00000590638 SRRM2Q9UQ35 2752 aaKnown RBP4.49□□□□□ -1.69
NEDD4L-230ENST00000590638 MT-ATP8P03928 68 aa4.48□□□□□ -1.69
NEDD4L-230ENST00000590638 KRTAP13-2Q52LG2 175 aa4.48□□□□□ -1.69
NEDD4L-230ENST00000590638 IMUPQ9GZP8 106 aa4.48□□□□□ -1.69
NEDD4L-230ENST00000590638 LRP1BQ9NZR2 4599 aa4.47□□□□□ -1.69
NEDD4L-230ENST00000590638 SS18L2Q9UHA2 77 aa4.47□□□□□ -1.69
NEDD4L-230ENST00000590638 IGKV3D-7A0A0C4DH55 119 aa4.46□□□□□ -1.7
NEDD4L-230ENST00000590638 BPY2O14599 106 aa4.46□□□□□ -1.7
NEDD4L-230ENST00000590638 HRCT1Q6UXD1 115 aa4.46□□□□□ -1.7
NEDD4L-230ENST00000590638 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.7
NEDD4L-230ENST00000590638 APOBP04114 4563 aaKnown RBP4.44□□□□□ -1.7
NEDD4L-230ENST00000590638 SCGB1A1P11684 91 aa4.44□□□□□ -1.7
NEDD4L-230ENST00000590638 J3KT08 172 aa4.43□□□□□ -1.7
NEDD4L-230ENST00000590638 SPAG11AQ6PDA7 123 aa4.43□□□□□ -1.7
NEDD4L-230ENST00000590638 LINC00472Q9H8W2 130 aa4.43□□□□□ -1.7
NEDD4L-230ENST00000590638 SPINK1P00995 79 aa4.42□□□□□ -1.7
NEDD4L-230ENST00000590638 HIST1H4AP62805 103 aaKnown RBP4.42□□□□□ -1.7
NEDD4L-230ENST00000590638 ASB16-AS1Q495Z4 193 aa4.42□□□□□ -1.7
NEDD4L-230ENST00000590638 Q5XG85 94 aa4.42□□□□□ -1.7
NEDD4L-230ENST00000590638 LIMD2Q9BT23 127 aa4.42□□□□□ -1.7
NEDD4L-230ENST00000590638 RPS29P62273 56 aaKnown RBP4.41□□□□□ -1.7
NEDD4L-230ENST00000590638 LINC00304Q8N9R0 145 aa4.41□□□□□ -1.7
NEDD4L-230ENST00000590638 DEFB116Q30KQ4 102 aa4.4□□□□□ -1.71
NEDD4L-230ENST00000590638 VPS13BQ7Z7G8 4022 aa4.4□□□□□ -1.71
NEDD4L-230ENST00000590638 NDUFB1O75438 58 aa4.39□□□□□ -1.71
NEDD4L-230ENST00000590638 IGKV4-1P06312 121 aa4.39□□□□□ -1.71
NEDD4L-230ENST00000590638 Q96NJ1 140 aa4.39□□□□□ -1.71
NEDD4L-230ENST00000590638 A8MWP4 228 aa4.38□□□□□ -1.71
NEDD4L-230ENST00000590638 KRTAP10-8P60410 259 aa4.38□□□□□ -1.71
NEDD4L-230ENST00000590638 A0A087WVE0 104 aa4.37□□□□□ -1.71
NEDD4L-230ENST00000590638 K7EQZ3 153 aa4.37□□□□□ -1.71
NEDD4L-230ENST00000590638 PRR15Q8IV56 129 aa4.37□□□□□ -1.71
NEDD4L-230ENST00000590638 Q8N9L7 120 aa4.37□□□□□ -1.71
NEDD4L-230ENST00000590638 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
NEDD4L-230ENST00000590638 FAM236AA0A1B0GUQ0 79 aa4.36□□□□□ -1.71
NEDD4L-230ENST00000590638 FAM236BA0A1B0GV22 79 aa4.36□□□□□ -1.71
NEDD4L-230ENST00000590638 C1orf195Q5TG92 126 aa4.36□□□□□ -1.71
NEDD4L-230ENST00000590638 OXTP01178 125 aa4.35□□□□□ -1.71
NEDD4L-230ENST00000590638 A0A1B0GVX0 72 aa4.34□□□□□ -1.71
NEDD4L-230ENST00000590638 HCG22E2RYF7 251 aa4.33□□□□□ -1.72
NEDD4L-230ENST00000590638 ATOX1O00244 68 aa4.33□□□□□ -1.72
NEDD4L-230ENST00000590638 FAT1Q14517 4588 aa4.33□□□□□ -1.72
NEDD4L-230ENST00000590638 HMCN2Q8NDA2 5059 aa4.32□□□□□ -1.72
NEDD4L-230ENST00000590638 FLG2Q5D862 2391 aaPredicted RBP4.31□□□□□ -1.72
NEDD4L-230ENST00000590638 IGHV6-1A0A0B4J1U7 121 aa4.31□□□□□ -1.72
NEDD4L-230ENST00000590638 C8orf87E5RJ46 101 aa4.31□□□□□ -1.72
NEDD4L-230ENST00000590638 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
NEDD4L-230ENST00000590638 C8orf17Q9NRJ1 99 aa4.31□□□□□ -1.72
NEDD4L-230ENST00000590638 PKHD1L1Q86WI1 4243 aa4.3□□□□□ -1.72
NEDD4L-230ENST00000590638 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
NEDD4L-230ENST00000590638 MT1HL1P0DM35 61 aa4.3□□□□□ -1.72
NEDD4L-230ENST00000590638 CASC2Q6XLA1 102 aa4.3□□□□□ -1.72
NEDD4L-230ENST00000590638 ANAPC13Q9BS18 74 aa4.3□□□□□ -1.72
NEDD4L-230ENST00000590638 hDV103S1A0JD37 113 aa4.29□□□□□ -1.72
NEDD4L-230ENST00000590638 WFDC13Q8IUB5 93 aa4.29□□□□□ -1.72
NEDD4L-230ENST00000590638 LINC00313P59037 77 aa4.28□□□□□ -1.72
NEDD4L-230ENST00000590638 TRAV7A0A075B6U4 112 aa4.27□□□□□ -1.73
NEDD4L-230ENST00000590638 SERP2Q8N6R1 65 aa4.27□□□□□ -1.73
NEDD4L-230ENST00000590638 TMEM254Q8TBM7 123 aa4.27□□□□□ -1.73
NEDD4L-230ENST00000590638 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
NEDD4L-230ENST00000590638 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
NEDD4L-230ENST00000590638 MRPL34Q9BQ48 92 aaKnown RBP4.26□□□□□ -1.73
NEDD4L-230ENST00000590638 COX7CP15954 63 aa4.25□□□□□ -1.73
NEDD4L-230ENST00000590638 FP248Q71RG6 208 aaPredicted RBP4.25□□□□□ -1.73
NEDD4L-230ENST00000590638 RETNLBQ9BQ08 111 aa4.25□□□□□ -1.73
NEDD4L-230ENST00000590638 TP53AIP1Q9HCN2 124 aa4.24□□□□□ -1.73
NEDD4L-230ENST00000590638 UQCRQO14949 82 aa4.23□□□□□ -1.73
NEDD4L-230ENST00000590638 NDUFS5O43920 106 aa4.22□□□□□ -1.73
NEDD4L-230ENST00000590638 C5orf47Q569G3 176 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms