RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 RBM3P98179 157 aaKnown RBP8.77□□□□□ -1.01
RETREG3-210ENST00000590541 DSCR8Q96T75 97 aa8.76□□□□□ -1.01
RETREG3-210ENST00000590541 LINC00472Q9H8W2 130 aa8.76□□□□□ -1.01
RETREG3-210ENST00000590541 TRBV20-1A0A075B6N2 111 aa8.74□□□□□ -1.01
RETREG3-210ENST00000590541 M0R143 59 aa8.74□□□□□ -1.01
RETREG3-210ENST00000590541 BAALC-AS2P0C853 105 aa8.72□□□□□ -1.01
RETREG3-210ENST00000590541 KRTAP16-1A8MUX0 517 aa8.7□□□□□ -1.02
RETREG3-210ENST00000590541 C9JAW5 83 aa8.7□□□□□ -1.02
RETREG3-210ENST00000590541 VPS25Q9BRG1 176 aa8.7□□□□□ -1.02
RETREG3-210ENST00000590541 KRTAP10-10P60014 251 aa8.69□□□□□ -1.02
RETREG3-210ENST00000590541 DEFB116Q30KQ4 102 aa8.69□□□□□ -1.02
RETREG3-210ENST00000590541 C8orf87E5RJ46 101 aa8.68□□□□□ -1.02
RETREG3-210ENST00000590541 J3KT08 172 aa8.68□□□□□ -1.02
RETREG3-210ENST00000590541 IGHV6-1A0A0B4J1U7 121 aa8.67□□□□□ -1.02
RETREG3-210ENST00000590541 ATXN8Q156A1 80 aa8.67□□□□□ -1.02
RETREG3-210ENST00000590541 A0A1B0GW54 56 aa8.66□□□□□ -1.02
RETREG3-210ENST00000590541 JMJD7-PLA2G4BH0Y9G9 81 aa8.66□□□□□ -1.02
RETREG3-210ENST00000590541 KRTAP19-6Q3LI70 58 aa8.66□□□□□ -1.02
RETREG3-210ENST00000590541 SMIM6P0DI80 62 aa8.65□□□□□ -1.02
RETREG3-210ENST00000590541 NOTCH2NLQ7Z3S9 236 aa8.65□□□□□ -1.02
RETREG3-210ENST00000590541 A0A1B0GVX0 72 aa8.64□□□□□ -1.03
RETREG3-210ENST00000590541 PDE6GP18545 87 aa8.63□□□□□ -1.03
RETREG3-210ENST00000590541 LYRM7Q5U5X0 104 aa8.63□□□□□ -1.03
RETREG3-210ENST00000590541 Q6ZQT0 140 aa8.63□□□□□ -1.03
RETREG3-210ENST00000590541 LINC00846Q9NV44 126 aa8.63□□□□□ -1.03
RETREG3-210ENST00000590541 KRTAP6-3Q3LI67 103 aa8.61□□□□□ -1.03
RETREG3-210ENST00000590541 LOC110117498A0A087WWA1 95 aa8.6□□□□□ -1.03
RETREG3-210ENST00000590541 NDUFB1O75438 58 aa8.6□□□□□ -1.03
RETREG3-210ENST00000590541 RBM12B-AS1Q9P1G2 102 aa8.58□□□□□ -1.04
RETREG3-210ENST00000590541 FAM236DA0A1B0GTK5 79 aa8.57□□□□□ -1.04
RETREG3-210ENST00000590541 FAM236CP0DP71 79 aa8.57□□□□□ -1.04
RETREG3-210ENST00000590541 NAA38Q9BRA0 125 aaKnown RBP8.57□□□□□ -1.04
RETREG3-210ENST00000590541 TSTD3H0UI37 97 aa8.56□□□□□ -1.04
RETREG3-210ENST00000590541 MPLKIPQ8TAP9 179 aa8.54□□□□□ -1.04
RETREG3-210ENST00000590541 A8MWP4 228 aa8.52□□□□□ -1.05
RETREG3-210ENST00000590541 HRES1P13985 223 aa8.52□□□□□ -1.05
RETREG3-210ENST00000590541 ZCCHC13Q8WW36 166 aaKnown RBP8.52□□□□□ -1.05
RETREG3-210ENST00000590541 Q8N9P0 234 aaPredicted RBP8.51□□□□□ -1.05
RETREG3-210ENST00000590541 MTURNQ8N3F0 131 aa8.5□□□□□ -1.05
RETREG3-210ENST00000590541 C14orf132Q9NPU4 83 aa8.5□□□□□ -1.05
RETREG3-210ENST00000590541 C8orf17Q9NRJ1 99 aa8.48□□□□□ -1.05
RETREG3-210ENST00000590541 BATFQ16520 125 aa8.47□□□□□ -1.05
RETREG3-210ENST00000590541 NREPQ16612 68 aa8.46□□□□□ -1.06
RETREG3-210ENST00000590541 IGKV3D-7A0A0C4DH55 119 aa8.45□□□□□ -1.06
RETREG3-210ENST00000590541 C9orf118A6NHY6 69 aa8.44□□□□□ -1.06
RETREG3-210ENST00000590541 H3BT86 120 aa8.44□□□□□ -1.06
RETREG3-210ENST00000590541 SPINK7P58062 85 aa8.43□□□□□ -1.06
RETREG3-210ENST00000590541 PRR15Q8IV56 129 aa8.43□□□□□ -1.06
RETREG3-210ENST00000590541 Q6ZVQ6 151 aa8.42□□□□□ -1.06
RETREG3-210ENST00000590541 A0A1W2PPM0 123 aa8.39□□□□□ -1.07
RETREG3-210ENST00000590541 TAX1BP3O14907 124 aa8.38□□□□□ -1.07
RETREG3-210ENST00000590541 LOC105371267A0A1B0GV96 52 aa8.36□□□□□ -1.07
RETREG3-210ENST00000590541 TMEM254Q8TBM7 123 aa8.36□□□□□ -1.07
RETREG3-210ENST00000590541 NEBP20929 6669 aa8.36□□□□□ -1.07
RETREG3-210ENST00000590541 MRPL34Q9BQ48 92 aaKnown RBP8.35□□□□□ -1.07
RETREG3-210ENST00000590541 MMP24-AS1A0A0U1RRL7 71 aa8.34□□□□□ -1.07
RETREG3-210ENST00000590541 hDV103S1A0JD37 113 aa8.32□□□□□ -1.08
RETREG3-210ENST00000590541 BPY2O14599 106 aa8.3□□□□□ -1.08
RETREG3-210ENST00000590541 WFDC13Q8IUB5 93 aa8.3□□□□□ -1.08
RETREG3-210ENST00000590541 MUC12Q9UKN1 5478 aa8.3□□□□□ -1.08
RETREG3-210ENST00000590541 K7EQZ3 153 aa8.29□□□□□ -1.08
RETREG3-210ENST00000590541 SPCS1Q9Y6A9 102 aa8.27□□□□□ -1.09
RETREG3-210ENST00000590541 NDUFS5O43920 106 aa8.26□□□□□ -1.09
RETREG3-210ENST00000590541 KRTAP20-1Q3LI63 56 aa8.23□□□□□ -1.09
RETREG3-210ENST00000590541 COL5A1-AS1Q5SY13 56 aa8.21□□□□□ -1.1
RETREG3-210ENST00000590541 CASC2Q6XLA1 102 aa8.18□□□□□ -1.1
RETREG3-210ENST00000590541 SMCPP49901 116 aaPredicted RBP8.17□□□□□ -1.1
RETREG3-210ENST00000590541 C7orf65Q6ZTY9 151 aa8.17□□□□□ -1.1
RETREG3-210ENST00000590541 UBL5Q9BZL1 73 aa8.17□□□□□ -1.1
RETREG3-210ENST00000590541 H1FX-AS1Q4G0G2 97 aa8.16□□□□□ -1.1
RETREG3-210ENST00000590541 IGKV2D-30A0A075B6S6 120 aa8.13□□□□□ -1.11
RETREG3-210ENST00000590541 IGKV2-30P06310 120 aa8.13□□□□□ -1.11
RETREG3-210ENST00000590541 CXCL6P80162 114 aa8.13□□□□□ -1.11
RETREG3-210ENST00000590541 Q5W150 140 aa8.13□□□□□ -1.11
RETREG3-210ENST00000590541 Q8N9L7 120 aa8.13□□□□□ -1.11
RETREG3-210ENST00000590541 PRO0461Q9UI25 63 aa8.13□□□□□ -1.11
RETREG3-210ENST00000590541 HCG22E2RYF7 251 aa8.12□□□□□ -1.11
RETREG3-210ENST00000590541 K7EP34 96 aa8.12□□□□□ -1.11
RETREG3-210ENST00000590541 GTF2H5Q6ZYL4 71 aa8.07□□□□□ -1.12
RETREG3-210ENST00000590541 F8W1H4 67 aa8.03□□□□□ -1.12
RETREG3-210ENST00000590541 A6NN06 94 aa8.01□□□□□ -1.13
RETREG3-210ENST00000590541 C4orf26Q17RF5 130 aa7.99□□□□□ -1.13
RETREG3-210ENST00000590541 TP53AIP1Q9HCN2 124 aa7.99□□□□□ -1.13
RETREG3-210ENST00000590541 KRTAP5-9P26371 169 aa7.98□□□□□ -1.13
RETREG3-210ENST00000590541 MDN1Q9NU22 5596 aa7.96□□□□□ -1.14
RETREG3-210ENST00000590541 KMT2DO14686 5537 aa7.95□□□□□ -1.14
RETREG3-210ENST00000590541 ETDBQ3ZM63 59 aa7.94□□□□□ -1.14
RETREG3-210ENST00000590541 MT1BP07438 61 aa7.92□□□□□ -1.14
RETREG3-210ENST00000590541 PCP4L1A6NKN8 68 aa7.88□□□□□ -1.15
RETREG3-210ENST00000590541 C1orf64Q8NEQ6 169 aa7.87□□□□□ -1.15
RETREG3-210ENST00000590541 ACYP1P07311 99 aa7.86□□□□□ -1.15
RETREG3-210ENST00000590541 KRTAP2-3P0C7H8 128 aa7.86□□□□□ -1.15
RETREG3-210ENST00000590541 KRTAP2-4Q9BYR9 128 aa7.86□□□□□ -1.15
RETREG3-210ENST00000590541 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
RETREG3-210ENST00000590541 S4R3F8 94 aa7.85□□□□□ -1.15
RETREG3-210ENST00000590541 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
RETREG3-210ENST00000590541 C5orf47Q569G3 176 aa7.84□□□□□ -1.15
RETREG3-210ENST00000590541 CSAG1Q6PB30 78 aa7.83□□□□□ -1.16
RETREG3-210ENST00000590541 Q5VV11 94 aa7.82□□□□□ -1.16
RETREG3-210ENST00000590541 FAM240AA0A1B0GVK7 77 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms