RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 CSMD3Q7Z407 3707 aa7.31□□□□□ -1.24
PDE4A-207ENST00000590407 A0A087X002 238 aa7.3□□□□□ -1.24
PDE4A-207ENST00000590407 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
PDE4A-207ENST00000590407 KRTAP21-3Q3LHN1 58 aa7.3□□□□□ -1.24
PDE4A-207ENST00000590407 NOTCH2NLQ7Z3S9 236 aa7.3□□□□□ -1.24
PDE4A-207ENST00000590407 IGLV7-43P04211 117 aa7.29□□□□□ -1.24
PDE4A-207ENST00000590407 SSBP3-AS1Q7Z2R9 100 aa7.29□□□□□ -1.24
PDE4A-207ENST00000590407 HECTD4Q9Y4D8 3996 aa7.29□□□□□ -1.24
PDE4A-207ENST00000590407 DNAH8Q96JB1 4490 aa7.29□□□□□ -1.24
PDE4A-207ENST00000590407 HRES1P13985 223 aa7.28□□□□□ -1.24
PDE4A-207ENST00000590407 ANAPC11Q9NYG5 84 aa7.28□□□□□ -1.24
PDE4A-207ENST00000590407 ATP11AUNQ6ZP68 121 aa7.26□□□□□ -1.25
PDE4A-207ENST00000590407 PRKDCP78527 4128 aaKnown RBP7.26□□□□□ -1.25
PDE4A-207ENST00000590407 LCA10Q71F78 164 aa7.25□□□□□ -1.25
PDE4A-207ENST00000590407 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
PDE4A-207ENST00000590407 A6NED7 52 aa7.23□□□□□ -1.25
PDE4A-207ENST00000590407 A8MU10 97 aa7.23□□□□□ -1.25
PDE4A-207ENST00000590407 Q5W150 140 aa7.23□□□□□ -1.25
PDE4A-207ENST00000590407 C1orf134Q5TEV5 83 aa7.23□□□□□ -1.25
PDE4A-207ENST00000590407 STARD9Q9P2P6 4700 aa7.23□□□□□ -1.25
PDE4A-207ENST00000590407 SPAG11AQ6PDA7 123 aa7.22□□□□□ -1.25
PDE4A-207ENST00000590407 CIRBP-AS1Q8TBR5 109 aa7.2□□□□□ -1.26
PDE4A-207ENST00000590407 DNAH2Q9P225 4427 aa7.2□□□□□ -1.26
PDE4A-207ENST00000590407 ACYP2P14621 99 aa7.19□□□□□ -1.26
PDE4A-207ENST00000590407 SPINK6Q6UWN8 80 aa7.19□□□□□ -1.26
PDE4A-207ENST00000590407 FBN3Q75N90 2809 aa7.18□□□□□ -1.26
PDE4A-207ENST00000590407 FAM229AH3BQW9 127 aa7.18□□□□□ -1.26
PDE4A-207ENST00000590407 DNAH6Q9C0G6 4158 aa7.18□□□□□ -1.26
PDE4A-207ENST00000590407 SEC61GP60059 68 aa7.17□□□□□ -1.26
PDE4A-207ENST00000590407 DMAC1Q96GE9 116 aa7.17□□□□□ -1.26
PDE4A-207ENST00000590407 LINC00313P59037 77 aa7.15□□□□□ -1.26
PDE4A-207ENST00000590407 KTN1-AS1Q86SY8 53 aa7.15□□□□□ -1.26
PDE4A-207ENST00000590407 FRAS1Q86XX4 4008 aa7.15□□□□□ -1.26
PDE4A-207ENST00000590407 A6NN06 94 aa7.15□□□□□ -1.27
PDE4A-207ENST00000590407 ALMS1Q8TCU4 4167 aa7.13□□□□□ -1.27
PDE4A-207ENST00000590407 IGKV2-30P06310 120 aa7.13□□□□□ -1.27
PDE4A-207ENST00000590407 PRR26Q8N8Z3 221 aa7.13□□□□□ -1.27
PDE4A-207ENST00000590407 SPTSSBQ8NFR3 76 aa7.13□□□□□ -1.27
PDE4A-207ENST00000590407 SPINK7P58062 85 aa7.11□□□□□ -1.27
PDE4A-207ENST00000590407 Q6ZSA8 131 aa7.11□□□□□ -1.27
PDE4A-207ENST00000590407 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
PDE4A-207ENST00000590407 KMT2AQ03164 3969 aa7.1□□□□□ -1.27
PDE4A-207ENST00000590407 KRTAP16-1A8MUX0 517 aa7.1□□□□□ -1.27
PDE4A-207ENST00000590407 DNAH11Q96DT5 4516 aa7.08□□□□□ -1.28
PDE4A-207ENST00000590407 KRTAP10-2P60368 255 aa7.06□□□□□ -1.28
PDE4A-207ENST00000590407 LY6G6CO95867 125 aa7.04□□□□□ -1.28
PDE4A-207ENST00000590407 DNAH5Q8TE73 4624 aa7.03□□□□□ -1.28
PDE4A-207ENST00000590407 KRTAP1-4P0C5Y4 121 aa7.03□□□□□ -1.28
PDE4A-207ENST00000590407 MEGF8Q7Z7M0 2845 aa7.03□□□□□ -1.28
PDE4A-207ENST00000590407 C7orf65Q6ZTY9 151 aa7.03□□□□□ -1.28
PDE4A-207ENST00000590407 KRTAP10-1P60331 282 aa7□□□□□ -1.29
PDE4A-207ENST00000590407 A0A1B0GU69 56 aa6.98□□□□□ -1.29
PDE4A-207ENST00000590407 TGP01266 2768 aa6.98□□□□□ -1.29
PDE4A-207ENST00000590407 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
PDE4A-207ENST00000590407 SPINK1P00995 79 aa6.97□□□□□ -1.29
PDE4A-207ENST00000590407 SPATA8Q6RVD6 105 aa6.97□□□□□ -1.29
PDE4A-207ENST00000590407 RETNLBQ9BQ08 111 aa6.96□□□□□ -1.3
PDE4A-207ENST00000590407 RBM12B-AS1Q9P1G2 102 aa6.95□□□□□ -1.3
PDE4A-207ENST00000590407 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
PDE4A-207ENST00000590407 C4orf48Q5BLP8 95 aa6.95□□□□□ -1.3
PDE4A-207ENST00000590407 LRP1BQ9NZR2 4599 aa6.92□□□□□ -1.3
PDE4A-207ENST00000590407 TYMSOSQ8TAI1 123 aa6.91□□□□□ -1.3
PDE4A-207ENST00000590407 UQCR11O14957 56 aa6.9□□□□□ -1.3
PDE4A-207ENST00000590407 PLA2G1BP04054 148 aaKnown RBP6.9□□□□□ -1.3
PDE4A-207ENST00000590407 PKD1P98161 4303 aa6.9□□□□□ -1.3
PDE4A-207ENST00000590407 FAT2Q9NYQ8 4349 aa6.87□□□□□ -1.31
PDE4A-207ENST00000590407 MIR22HGQ0VDD5 57 aa6.87□□□□□ -1.31
PDE4A-207ENST00000590407 SACSQ9NZJ4 4579 aa6.85□□□□□ -1.31
PDE4A-207ENST00000590407 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.31
PDE4A-207ENST00000590407 VPS13BQ7Z7G8 4022 aa6.84□□□□□ -1.31
PDE4A-207ENST00000590407 A8MUU9 505 aa6.78□□□□□ -1.32
PDE4A-207ENST00000590407 C20orf166-AS1Q96NR2 134 aa6.78□□□□□ -1.32
PDE4A-207ENST00000590407 Q8N1X5 172 aa6.74□□□□□ -1.33
PDE4A-207ENST00000590407 HYDINQ4G0P3 5121 aa6.72□□□□□ -1.33
PDE4A-207ENST00000590407 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
PDE4A-207ENST00000590407 PKHD1L1Q86WI1 4243 aa6.7□□□□□ -1.34
PDE4A-207ENST00000590407 ADM2Q7Z4H4 148 aa6.67□□□□□ -1.34
PDE4A-207ENST00000590407 KRTAP10-4P60372 401 aaPredicted RBP6.66□□□□□ -1.34
PDE4A-207ENST00000590407 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
PDE4A-207ENST00000590407 C9orf92A6NGG3 77 aa6.62□□□□□ -1.35
PDE4A-207ENST00000590407 H0YAA0 97 aa6.62□□□□□ -1.35
PDE4A-207ENST00000590407 APOBP04114 4563 aaKnown RBP6.61□□□□□ -1.35
PDE4A-207ENST00000590407 A0A1B0GVY2 172 aa6.61□□□□□ -1.35
PDE4A-207ENST00000590407 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
PDE4A-207ENST00000590407 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
PDE4A-207ENST00000590407 A0A1B0GU33 70 aa6.59□□□□□ -1.35
PDE4A-207ENST00000590407 H1FX-AS1Q4G0G2 97 aa6.58□□□□□ -1.36
PDE4A-207ENST00000590407 COX6B2Q6YFQ2 88 aa6.58□□□□□ -1.36
PDE4A-207ENST00000590407 PKHD1P08F94 4074 aa6.58□□□□□ -1.36
PDE4A-207ENST00000590407 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
PDE4A-207ENST00000590407 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
PDE4A-207ENST00000590407 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
PDE4A-207ENST00000590407 RYR3Q15413 4870 aa6.48□□□□□ -1.37
PDE4A-207ENST00000590407 FAT1Q14517 4588 aa6.47□□□□□ -1.37
PDE4A-207ENST00000590407 FLG2Q5D862 2391 aaPredicted RBP6.46□□□□□ -1.37
PDE4A-207ENST00000590407 K7ERS5 55 aa6.43□□□□□ -1.38
PDE4A-207ENST00000590407 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
PDE4A-207ENST00000590407 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
PDE4A-207ENST00000590407 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
PDE4A-207ENST00000590407 TNXBP22105 4242 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms