RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 A8MWP4 228 aa8.46□□□□□ -1.06
DDX39A-211ENST00000590239 DSCR10P59022 87 aa8.46□□□□□ -1.06
DDX39A-211ENST00000590239 PRR4Q16378 134 aa8.46□□□□□ -1.06
DDX39A-211ENST00000590239 NDUFB1O75438 58 aa8.45□□□□□ -1.06
DDX39A-211ENST00000590239 IGKV3D-7A0A0C4DH55 119 aa8.42□□□□□ -1.06
DDX39A-211ENST00000590239 A0A1B0GVX0 72 aa8.42□□□□□ -1.06
DDX39A-211ENST00000590239 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
DDX39A-211ENST00000590239 IGHV6-1A0A0B4J1U7 121 aa8.39□□□□□ -1.07
DDX39A-211ENST00000590239 K7EQZ3 153 aa8.39□□□□□ -1.07
DDX39A-211ENST00000590239 C8orf87E5RJ46 101 aa8.38□□□□□ -1.07
DDX39A-211ENST00000590239 LRP2P98164 4655 aa8.38□□□□□ -1.07
DDX39A-211ENST00000590239 TPRXLQ17RH7 258 aa8.37□□□□□ -1.07
DDX39A-211ENST00000590239 KRTAP13-3Q3SY46 172 aa8.37□□□□□ -1.07
DDX39A-211ENST00000590239 Q8N9L7 120 aa8.37□□□□□ -1.07
DDX39A-211ENST00000590239 LINC00313P59037 77 aa8.35□□□□□ -1.07
DDX39A-211ENST00000590239 C8orf17Q9NRJ1 99 aa8.34□□□□□ -1.07
DDX39A-211ENST00000590239 C9orf92A6NGG3 77 aa8.32□□□□□ -1.08
DDX39A-211ENST00000590239 NOTCH2NLQ7Z3S9 236 aa8.32□□□□□ -1.08
DDX39A-211ENST00000590239 MMP24-AS1A0A0U1RRL7 71 aa8.31□□□□□ -1.08
DDX39A-211ENST00000590239 HIST1H4AP62805 103 aaKnown RBP8.31□□□□□ -1.08
DDX39A-211ENST00000590239 MT-ATP8P03928 68 aa8.3□□□□□ -1.08
DDX39A-211ENST00000590239 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
DDX39A-211ENST00000590239 IMUPQ9GZP8 106 aa8.29□□□□□ -1.08
DDX39A-211ENST00000590239 KRTAP9-6A0A140TA67 174 aa8.28□□□□□ -1.08
DDX39A-211ENST00000590239 KRTAP16-1A8MUX0 517 aa8.28□□□□□ -1.08
DDX39A-211ENST00000590239 hDV103S1A0JD37 113 aa8.27□□□□□ -1.09
DDX39A-211ENST00000590239 HCG22E2RYF7 251 aa8.27□□□□□ -1.09
DDX39A-211ENST00000590239 CASC2Q6XLA1 102 aa8.26□□□□□ -1.09
DDX39A-211ENST00000590239 TMEM254Q8TBM7 123 aa8.26□□□□□ -1.09
DDX39A-211ENST00000590239 XP32Q5T750 250 aa8.25□□□□□ -1.09
DDX39A-211ENST00000590239 WFDC13Q8IUB5 93 aa8.24□□□□□ -1.09
DDX39A-211ENST00000590239 A0A087WVE0 104 aa8.23□□□□□ -1.09
DDX39A-211ENST00000590239 C20orf166-AS1Q96NR2 134 aa8.23□□□□□ -1.09
DDX39A-211ENST00000590239 MRPL34Q9BQ48 92 aaKnown RBP8.23□□□□□ -1.09
DDX39A-211ENST00000590239 A8MUU9 505 aa8.21□□□□□ -1.1
DDX39A-211ENST00000590239 Q75L30 129 aa8.21□□□□□ -1.1
DDX39A-211ENST00000590239 Q8N9P0 234 aaPredicted RBP8.21□□□□□ -1.1
DDX39A-211ENST00000590239 FAT4Q6V0I7 4981 aa8.19□□□□□ -1.1
DDX39A-211ENST00000590239 RPL37P61927 97 aaKnown RBP8.18□□□□□ -1.1
DDX39A-211ENST00000590239 NDUFS5O43920 106 aa8.14□□□□□ -1.11
DDX39A-211ENST00000590239 LPAP08519 4548 aa8.14□□□□□ -1.11
DDX39A-211ENST00000590239 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
DDX39A-211ENST00000590239 SEC61BP60468 96 aaKnown RBP8.1□□□□□ -1.11
DDX39A-211ENST00000590239 ATP11AUNQ6ZP68 121 aa8.1□□□□□ -1.11
DDX39A-211ENST00000590239 FAM236AA0A1B0GUQ0 79 aa8.09□□□□□ -1.11
DDX39A-211ENST00000590239 FAM236BA0A1B0GV22 79 aa8.09□□□□□ -1.11
DDX39A-211ENST00000590239 SCGB1A1P11684 91 aa8.08□□□□□ -1.12
DDX39A-211ENST00000590239 ZCCHC13Q8WW36 166 aaKnown RBP8.08□□□□□ -1.12
DDX39A-211ENST00000590239 MUC2Q02817 5179 aa8.07□□□□□ -1.12
DDX39A-211ENST00000590239 PCOTHQ58A44 107 aa8.05□□□□□ -1.12
DDX39A-211ENST00000590239 UQCRQO14949 82 aa8.04□□□□□ -1.12
DDX39A-211ENST00000590239 OCR1Q9BZK8 76 aa8.04□□□□□ -1.12
DDX39A-211ENST00000590239 SMIM20Q8N5G0 67 aa8.03□□□□□ -1.12
DDX39A-211ENST00000590239 ATOX1O00244 68 aa8.02□□□□□ -1.13
DDX39A-211ENST00000590239 Q5W150 140 aa8.01□□□□□ -1.13
DDX39A-211ENST00000590239 TRAV7A0A075B6U4 112 aa7.98□□□□□ -1.13
DDX39A-211ENST00000590239 TRAV22A0A0B4J277 110 aa7.97□□□□□ -1.13
DDX39A-211ENST00000590239 C5orf47Q569G3 176 aa7.95□□□□□ -1.14
DDX39A-211ENST00000590239 MUC17Q685J3 4493 aa7.95□□□□□ -1.14
DDX39A-211ENST00000590239 H0Y9P7 68 aa7.93□□□□□ -1.14
DDX39A-211ENST00000590239 MP68P56378 58 aa7.91□□□□□ -1.14
DDX39A-211ENST00000590239 SERP2Q8N6R1 65 aa7.91□□□□□ -1.14
DDX39A-211ENST00000590239 SPINK7P58062 85 aa7.89□□□□□ -1.15
DDX39A-211ENST00000590239 LOC101927531A0A1B0GV80 90 aa7.88□□□□□ -1.15
DDX39A-211ENST00000590239 H3BPC8 53 aa7.88□□□□□ -1.15
DDX39A-211ENST00000590239 IGKV2-30P06310 120 aa7.88□□□□□ -1.15
DDX39A-211ENST00000590239 C7orf65Q6ZTY9 151 aa7.88□□□□□ -1.15
DDX39A-211ENST00000590239 KRTAP4-1Q9BYQ7 146 aa7.88□□□□□ -1.15
DDX39A-211ENST00000590239 IGKV2D-30A0A075B6S6 120 aa7.87□□□□□ -1.15
DDX39A-211ENST00000590239 C1orf64Q8NEQ6 169 aa7.86□□□□□ -1.15
DDX39A-211ENST00000590239 LINC00208Q96KT6 92 aa7.85□□□□□ -1.15
DDX39A-211ENST00000590239 ANAPC13Q9BS18 74 aa7.84□□□□□ -1.15
DDX39A-211ENST00000590239 CYP4F30PQ9H0H9 118 aa7.84□□□□□ -1.15
DDX39A-211ENST00000590239 COX7CP15954 63 aa7.82□□□□□ -1.16
DDX39A-211ENST00000590239 A0A0U1RQV1 116 aa7.79□□□□□ -1.16
DDX39A-211ENST00000590239 HRES1P13985 223 aa7.79□□□□□ -1.16
DDX39A-211ENST00000590239 LCE2AQ5TA79 106 aaPredicted RBP7.78□□□□□ -1.16
DDX39A-211ENST00000590239 C20orf197Q8N268 126 aa7.76□□□□□ -1.17
DDX39A-211ENST00000590239 MPLKIPQ8TAP9 179 aa7.75□□□□□ -1.17
DDX39A-211ENST00000590239 FSIP2Q5CZC0 6907 aa7.74□□□□□ -1.17
DDX39A-211ENST00000590239 KLKP1Q107X0 134 aa7.72□□□□□ -1.17
DDX39A-211ENST00000590239 RBM12B-AS1Q9P1G2 102 aa7.72□□□□□ -1.17
DDX39A-211ENST00000590239 SNURFQ9Y675 71 aa7.72□□□□□ -1.17
DDX39A-211ENST00000590239 CRCT1Q9UGL9 99 aa7.69□□□□□ -1.18
DDX39A-211ENST00000590239 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
DDX39A-211ENST00000590239 COX6B2Q6YFQ2 88 aa7.66□□□□□ -1.18
DDX39A-211ENST00000590239 KRTAP19-2Q3LHN2 52 aa7.65□□□□□ -1.18
DDX39A-211ENST00000590239 CCDC179H3BU77 68 aa7.64□□□□□ -1.19
DDX39A-211ENST00000590239 NDUFC1O43677 76 aa7.64□□□□□ -1.19
DDX39A-211ENST00000590239 FAM236DA0A1B0GTK5 79 aa7.63□□□□□ -1.19
DDX39A-211ENST00000590239 FAM236CP0DP71 79 aa7.63□□□□□ -1.19
DDX39A-211ENST00000590239 LCE2DQ5TA82 110 aaPredicted RBP7.59□□□□□ -1.19
DDX39A-211ENST00000590239 LCE2CQ5TA81 110 aa7.58□□□□□ -1.2
DDX39A-211ENST00000590239 SPANXA2-OT1Q8N9U9 137 aa7.58□□□□□ -1.2
DDX39A-211ENST00000590239 KRTAP3-1Q9BYR8 98 aa7.58□□□□□ -1.2
DDX39A-211ENST00000590239 CYSTM1Q9H1C7 97 aa7.58□□□□□ -1.2
DDX39A-211ENST00000590239 A8MUN3 132 aa7.57□□□□□ -1.2
DDX39A-211ENST00000590239 H7BZZ5 65 aa7.57□□□□□ -1.2
DDX39A-211ENST00000590239 H1FX-AS1Q4G0G2 97 aa7.56□□□□□ -1.2
DDX39A-211ENST00000590239 PCP4P48539 62 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms