RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 V9GYY9 64 aa12.38□□□□□ -0.43
ZNF554-203ENST00000590116 IGLV7-46A0A075B6I9 117 aa12.37□□□□□ -0.43
ZNF554-203ENST00000590116 DNHD1Q96M86 4753 aa12.37□□□□□ -0.43
ZNF554-203ENST00000590116 CD164Q04900 197 aa12.37□□□□□ -0.43
ZNF554-203ENST00000590116 DNAH5Q8TE73 4624 aa12.36□□□□□ -0.43
ZNF554-203ENST00000590116 SPINK6Q6UWN8 80 aa12.35□□□□□ -0.43
ZNF554-203ENST00000590116 MRPL34Q9BQ48 92 aaKnown RBP12.35□□□□□ -0.43
ZNF554-203ENST00000590116 C1orf134Q5TEV5 83 aa12.33□□□□□ -0.44
ZNF554-203ENST00000590116 COA5Q86WW8 74 aa12.33□□□□□ -0.44
ZNF554-203ENST00000590116 Q8N9P0 234 aaPredicted RBP12.33□□□□□ -0.44
ZNF554-203ENST00000590116 IGLV7-43P04211 117 aa12.32□□□□□ -0.44
ZNF554-203ENST00000590116 CIRBP-AS1Q8TBR5 109 aa12.3□□□□□ -0.44
ZNF554-203ENST00000590116 Q5VV11 94 aa12.29□□□□□ -0.44
ZNF554-203ENST00000590116 LIMD2Q9BT23 127 aa12.27□□□□□ -0.45
ZNF554-203ENST00000590116 A8MU10 97 aa12.26□□□□□ -0.45
ZNF554-203ENST00000590116 LY6G6CO95867 125 aa12.26□□□□□ -0.45
ZNF554-203ENST00000590116 C1orf195Q5TG92 126 aa12.25□□□□□ -0.45
ZNF554-203ENST00000590116 PRR15LQ9BU68 103 aa12.24□□□□□ -0.45
ZNF554-203ENST00000590116 CHKB-CPT1BH3BT56 60 aa12.2□□□□□ -0.46
ZNF554-203ENST00000590116 Q5W150 140 aa12.2□□□□□ -0.46
ZNF554-203ENST00000590116 KRTAP10-2P60368 255 aa12.19□□□□□ -0.46
ZNF554-203ENST00000590116 LRP1BQ9NZR2 4599 aa12.19□□□□□ -0.46
ZNF554-203ENST00000590116 HYDINQ4G0P3 5121 aa12.15□□□□□ -0.46
ZNF554-203ENST00000590116 SSBP3-AS1Q7Z2R9 100 aa12.14□□□□□ -0.47
ZNF554-203ENST00000590116 HRES1P13985 223 aa12.14□□□□□ -0.47
ZNF554-203ENST00000590116 LOC101927531A0A1B0GV80 90 aa12.13□□□□□ -0.47
ZNF554-203ENST00000590116 SPAG11AQ6PDA7 123 aa12.12□□□□□ -0.47
ZNF554-203ENST00000590116 PKD1P98161 4303 aa12.12□□□□□ -0.47
ZNF554-203ENST00000590116 KRTAP13-3Q3SY46 172 aa12.11□□□□□ -0.47
ZNF554-203ENST00000590116 Q75L30 129 aa12.09□□□□□ -0.47
ZNF554-203ENST00000590116 FAT2Q9NYQ8 4349 aa12.08□□□□□ -0.48
ZNF554-203ENST00000590116 C8orf87E5RJ46 101 aa12.06□□□□□ -0.48
ZNF554-203ENST00000590116 RETNLBQ9BQ08 111 aa12.06□□□□□ -0.48
ZNF554-203ENST00000590116 KRTAP13-2Q52LG2 175 aa12.05□□□□□ -0.48
ZNF554-203ENST00000590116 A6NED7 52 aa12.04□□□□□ -0.48
ZNF554-203ENST00000590116 LINC00313P59037 77 aa12.03□□□□□ -0.48
ZNF554-203ENST00000590116 LINC01558Q9Y6Z2 57 aa12.03□□□□□ -0.48
ZNF554-203ENST00000590116 VPS13BQ7Z7G8 4022 aa12.02□□□□□ -0.49
ZNF554-203ENST00000590116 KRTAP10-1P60331 282 aa12.01□□□□□ -0.49
ZNF554-203ENST00000590116 LCA10Q71F78 164 aa11.99□□□□□ -0.49
ZNF554-203ENST00000590116 PRR26Q8N8Z3 221 aa11.98□□□□□ -0.49
ZNF554-203ENST00000590116 Q6ZSA8 131 aa11.96□□□□□ -0.49
ZNF554-203ENST00000590116 PMAIP1Q13794 54 aa11.95□□□□□ -0.5
ZNF554-203ENST00000590116 SPTSSBQ8NFR3 76 aa11.94□□□□□ -0.5
ZNF554-203ENST00000590116 FAM229AH3BQW9 127 aa11.93□□□□□ -0.5
ZNF554-203ENST00000590116 ACYP2P14621 99 aa11.91□□□□□ -0.5
ZNF554-203ENST00000590116 KRTAP1-4P0C5Y4 121 aa11.88□□□□□ -0.51
ZNF554-203ENST00000590116 SPINK7P58062 85 aa11.87□□□□□ -0.51
ZNF554-203ENST00000590116 CDC42SE1Q9NRR8 79 aa11.87□□□□□ -0.51
ZNF554-203ENST00000590116 DMAC1Q96GE9 116 aa11.86□□□□□ -0.51
ZNF554-203ENST00000590116 PKHD1P08F94 4074 aa11.86□□□□□ -0.51
ZNF554-203ENST00000590116 KRTAP16-1A8MUX0 517 aa11.85□□□□□ -0.51
ZNF554-203ENST00000590116 ATP11AUNQ6ZP68 121 aa11.85□□□□□ -0.51
ZNF554-203ENST00000590116 IGKV2-30P06310 120 aa11.84□□□□□ -0.51
ZNF554-203ENST00000590116 PLA2G1BP04054 148 aaKnown RBP11.79□□□□□ -0.52
ZNF554-203ENST00000590116 C4orf48Q5BLP8 95 aa11.77□□□□□ -0.53
ZNF554-203ENST00000590116 IGKV2D-30A0A075B6S6 120 aa11.76□□□□□ -0.53
ZNF554-203ENST00000590116 TYMSOSQ8TAI1 123 aa11.75□□□□□ -0.53
ZNF554-203ENST00000590116 A6NN06 94 aa11.69□□□□□ -0.54
ZNF554-203ENST00000590116 SACSQ9NZJ4 4579 aa11.69□□□□□ -0.54
ZNF554-203ENST00000590116 SPINK1P00995 79 aa11.68□□□□□ -0.54
ZNF554-203ENST00000590116 KTN1-AS1Q86SY8 53 aa11.66□□□□□ -0.54
ZNF554-203ENST00000590116 SEC61GP60059 68 aa11.65□□□□□ -0.54
ZNF554-203ENST00000590116 A0A1B0GU69 56 aa11.63□□□□□ -0.55
ZNF554-203ENST00000590116 DYNC1H1Q14204 4646 aaKnown RBP11.62□□□□□ -0.55
ZNF554-203ENST00000590116 C7orf65Q6ZTY9 151 aa11.62□□□□□ -0.55
ZNF554-203ENST00000590116 FAT1Q14517 4588 aa11.6□□□□□ -0.55
ZNF554-203ENST00000590116 LINC00304Q8N9R0 145 aa11.58□□□□□ -0.56
ZNF554-203ENST00000590116 SMR3BP02814 79 aaPredicted RBP11.57□□□□□ -0.56
ZNF554-203ENST00000590116 Q8N1X5 172 aa11.51□□□□□ -0.57
ZNF554-203ENST00000590116 RPS29P62273 56 aaKnown RBP11.47□□□□□ -0.57
ZNF554-203ENST00000590116 APOBP04114 4563 aaKnown RBP11.47□□□□□ -0.57
ZNF554-203ENST00000590116 C9orf92A6NGG3 77 aa11.45□□□□□ -0.58
ZNF554-203ENST00000590116 PKHD1L1Q86WI1 4243 aa11.44□□□□□ -0.58
ZNF554-203ENST00000590116 SPATA8Q6RVD6 105 aa11.42□□□□□ -0.58
ZNF554-203ENST00000590116 UQCR11O14957 56 aa11.41□□□□□ -0.58
ZNF554-203ENST00000590116 MIR22HGQ0VDD5 57 aa11.39□□□□□ -0.59
ZNF554-203ENST00000590116 RBM12B-AS1Q9P1G2 102 aa11.39□□□□□ -0.59
ZNF554-203ENST00000590116 A8MUU9 505 aa11.3□□□□□ -0.6
ZNF554-203ENST00000590116 C20orf166-AS1Q96NR2 134 aa11.3□□□□□ -0.6
ZNF554-203ENST00000590116 KRTAP10-4P60372 401 aaPredicted RBP11.29□□□□□ -0.6
ZNF554-203ENST00000590116 ADM2Q7Z4H4 148 aa11.27□□□□□ -0.61
ZNF554-203ENST00000590116 PRAC1Q96KF2 57 aa11.27□□□□□ -0.61
ZNF554-203ENST00000590116 A0A1B0GVY2 172 aa11.26□□□□□ -0.61
ZNF554-203ENST00000590116 RYR2Q92736 4967 aa11.24□□□□□ -0.61
ZNF554-203ENST00000590116 KRTAP3-1Q9BYR8 98 aa11.2□□□□□ -0.62
ZNF554-203ENST00000590116 KRTAP21-3Q3LHN1 58 aa11.19□□□□□ -0.62
ZNF554-203ENST00000590116 KMT2CQ8NEZ4 4911 aaKnown RBP11.19□□□□□ -0.62
ZNF554-203ENST00000590116 LRP1Q07954 4544 aaKnown RBP11.16□□□□□ -0.62
ZNF554-203ENST00000590116 FLG2Q5D862 2391 aaPredicted RBP11.13□□□□□ -0.63
ZNF554-203ENST00000590116 FAT3Q8TDW7 4589 aa11.12□□□□□ -0.63
ZNF554-203ENST00000590116 TNXBP22105 4242 aa11.06□□□□□ -0.64
ZNF554-203ENST00000590116 H0YAA0 97 aa11.04□□□□□ -0.64
ZNF554-203ENST00000590116 HSPG2P98160 4391 aa11.03□□□□□ -0.64
ZNF554-203ENST00000590116 A0A1B0GU33 70 aa10.98□□□□□ -0.65
ZNF554-203ENST00000590116 COX6B2Q6YFQ2 88 aa10.98□□□□□ -0.65
ZNF554-203ENST00000590116 MYCBP2O75592 4640 aa10.98□□□□□ -0.65
ZNF554-203ENST00000590116 H1FX-AS1Q4G0G2 97 aa10.93□□□□□ -0.66
ZNF554-203ENST00000590116 CSAG1Q6PB30 78 aa10.88□□□□□ -0.67
ZNF554-203ENST00000590116 DMBT1Q9UGM3 2413 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms