RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SPINK6Q6UWN8 80 aa11.23□□□□□ -0.61
PRKCSH-209ENST00000589838 DNAH5Q8TE73 4624 aa11.22□□□□□ -0.61
PRKCSH-209ENST00000589838 PRR4Q16378 134 aa11.21□□□□□ -0.62
PRKCSH-209ENST00000589838 C8orf87E5RJ46 101 aa11.19□□□□□ -0.62
PRKCSH-209ENST00000589838 A0A087X002 238 aa11.17□□□□□ -0.62
PRKCSH-209ENST00000589838 KRTAP13-2Q52LG2 175 aa11.17□□□□□ -0.62
PRKCSH-209ENST00000589838 NOTCH2NLQ7Z3S9 236 aa11.17□□□□□ -0.62
PRKCSH-209ENST00000589838 MPLKIPQ8TAP9 179 aa11.15□□□□□ -0.63
PRKCSH-209ENST00000589838 PKD1P98161 4303 aa11.13□□□□□ -0.63
PRKCSH-209ENST00000589838 IGLV7-46A0A075B6I9 117 aa11.12□□□□□ -0.63
PRKCSH-209ENST00000589838 LIMD2Q9BT23 127 aa11.1□□□□□ -0.63
PRKCSH-209ENST00000589838 KRTAP1-4P0C5Y4 121 aa11.09□□□□□ -0.63
PRKCSH-209ENST00000589838 Q1T7F1 81 aa11.08□□□□□ -0.64
PRKCSH-209ENST00000589838 LINC00336Q6ZUF6 198 aa11.08□□□□□ -0.64
PRKCSH-209ENST00000589838 LINC00313P59037 77 aa11.07□□□□□ -0.64
PRKCSH-209ENST00000589838 PCOTHQ58A44 107 aa11.07□□□□□ -0.64
PRKCSH-209ENST00000589838 C1orf195Q5TG92 126 aa11.07□□□□□ -0.64
PRKCSH-209ENST00000589838 FAT2Q9NYQ8 4349 aa11.07□□□□□ -0.64
PRKCSH-209ENST00000589838 LOC101927531A0A1B0GV80 90 aa11.06□□□□□ -0.64
PRKCSH-209ENST00000589838 HYDINQ4G0P3 5121 aa11.06□□□□□ -0.64
PRKCSH-209ENST00000589838 C4orf48Q5BLP8 95 aa11.05□□□□□ -0.64
PRKCSH-209ENST00000589838 PLA2G1BP04054 148 aaKnown RBP11.04□□□□□ -0.64
PRKCSH-209ENST00000589838 V9GYY9 64 aa11.04□□□□□ -0.64
PRKCSH-209ENST00000589838 TYMSOSQ8TAI1 123 aa11.01□□□□□ -0.65
PRKCSH-209ENST00000589838 LRP1BQ9NZR2 4599 aa11□□□□□ -0.65
PRKCSH-209ENST00000589838 KRTAP13-3Q3SY46 172 aa10.98□□□□□ -0.65
PRKCSH-209ENST00000589838 SPINK1P00995 79 aa10.98□□□□□ -0.65
PRKCSH-209ENST00000589838 Q5W150 140 aa10.98□□□□□ -0.65
PRKCSH-209ENST00000589838 Q8N9P0 234 aaPredicted RBP10.97□□□□□ -0.65
PRKCSH-209ENST00000589838 FAM229AH3BQW9 127 aa10.96□□□□□ -0.65
PRKCSH-209ENST00000589838 COA5Q86WW8 74 aa10.96□□□□□ -0.65
PRKCSH-209ENST00000589838 PRO0628Q9UI54 55 aa10.93□□□□□ -0.66
PRKCSH-209ENST00000589838 SPAG11AQ6PDA7 123 aa10.89□□□□□ -0.67
PRKCSH-209ENST00000589838 RPS29P62273 56 aaKnown RBP10.89□□□□□ -0.67
PRKCSH-209ENST00000589838 KRTAP16-1A8MUX0 517 aa10.87□□□□□ -0.67
PRKCSH-209ENST00000589838 A0A1B0GVY2 172 aa10.87□□□□□ -0.67
PRKCSH-209ENST00000589838 BRK1Q8WUW1 75 aa10.87□□□□□ -0.67
PRKCSH-209ENST00000589838 VPS13BQ7Z7G8 4022 aa10.86□□□□□ -0.67
PRKCSH-209ENST00000589838 LINC00304Q8N9R0 145 aa10.86□□□□□ -0.67
PRKCSH-209ENST00000589838 PSPHP1O15172 72 aa10.85□□□□□ -0.67
PRKCSH-209ENST00000589838 PRR26Q8N8Z3 221 aa10.84□□□□□ -0.67
PRKCSH-209ENST00000589838 SACSQ9NZJ4 4579 aa10.83□□□□□ -0.68
PRKCSH-209ENST00000589838 HRES1P13985 223 aa10.82□□□□□ -0.68
PRKCSH-209ENST00000589838 SMR3BP02814 79 aaPredicted RBP10.81□□□□□ -0.68
PRKCSH-209ENST00000589838 IGKV2-30P06310 120 aa10.81□□□□□ -0.68
PRKCSH-209ENST00000589838 A8MUN3 132 aa10.8□□□□□ -0.68
PRKCSH-209ENST00000589838 ACYP2P14621 99 aa10.78□□□□□ -0.68
PRKCSH-209ENST00000589838 RETNLBQ9BQ08 111 aa10.78□□□□□ -0.68
PRKCSH-209ENST00000589838 Q5VV11 94 aa10.74□□□□□ -0.69
PRKCSH-209ENST00000589838 PRR15LQ9BU68 103 aa10.74□□□□□ -0.69
PRKCSH-209ENST00000589838 DMAC1Q96GE9 116 aa10.72□□□□□ -0.69
PRKCSH-209ENST00000589838 LINC01558Q9Y6Z2 57 aa10.71□□□□□ -0.69
PRKCSH-209ENST00000589838 DYNC1H1Q14204 4646 aaKnown RBP10.71□□□□□ -0.7
PRKCSH-209ENST00000589838 KRTAP10-4P60372 401 aaPredicted RBP10.7□□□□□ -0.7
PRKCSH-209ENST00000589838 PKHD1P08F94 4074 aa10.69□□□□□ -0.7
PRKCSH-209ENST00000589838 CHKB-CPT1BH3BT56 60 aa10.67□□□□□ -0.7
PRKCSH-209ENST00000589838 Q75L30 129 aa10.66□□□□□ -0.7
PRKCSH-209ENST00000589838 IGKV2D-30A0A075B6S6 120 aa10.65□□□□□ -0.7
PRKCSH-209ENST00000589838 APOBP04114 4563 aaKnown RBP10.57□□□□□ -0.72
PRKCSH-209ENST00000589838 C7orf65Q6ZTY9 151 aa10.57□□□□□ -0.72
PRKCSH-209ENST00000589838 A6NED7 52 aa10.54□□□□□ -0.72
PRKCSH-209ENST00000589838 RYR2Q92736 4967 aa10.53□□□□□ -0.72
PRKCSH-209ENST00000589838 A8MUU9 505 aa10.52□□□□□ -0.73
PRKCSH-209ENST00000589838 C20orf166-AS1Q96NR2 134 aa10.52□□□□□ -0.73
PRKCSH-209ENST00000589838 C9orf92A6NGG3 77 aa10.49□□□□□ -0.73
PRKCSH-209ENST00000589838 PKHD1L1Q86WI1 4243 aa10.48□□□□□ -0.73
PRKCSH-209ENST00000589838 KMT2CQ8NEZ4 4911 aaKnown RBP10.48□□□□□ -0.73
PRKCSH-209ENST00000589838 FAT1Q14517 4588 aa10.46□□□□□ -0.73
PRKCSH-209ENST00000589838 CDC42SE1Q9NRR8 79 aa10.43□□□□□ -0.74
PRKCSH-209ENST00000589838 LCA10Q71F78 164 aa10.41□□□□□ -0.74
PRKCSH-209ENST00000589838 A0A1B0GU69 56 aa10.38□□□□□ -0.75
PRKCSH-209ENST00000589838 ATP11AUNQ6ZP68 121 aa10.38□□□□□ -0.75
PRKCSH-209ENST00000589838 A8MU10 97 aa10.37□□□□□ -0.75
PRKCSH-209ENST00000589838 SPINK7P58062 85 aa10.36□□□□□ -0.75
PRKCSH-209ENST00000589838 Q5VSD8 79 aa10.36□□□□□ -0.75
PRKCSH-209ENST00000589838 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
PRKCSH-209ENST00000589838 Q8N1X5 172 aa10.34□□□□□ -0.75
PRKCSH-209ENST00000589838 PMAIP1Q13794 54 aa10.3□□□□□ -0.76
PRKCSH-209ENST00000589838 SPTSSBQ8NFR3 76 aa10.3□□□□□ -0.76
PRKCSH-209ENST00000589838 FLG2Q5D862 2391 aaPredicted RBP10.29□□□□□ -0.76
PRKCSH-209ENST00000589838 RYR3Q15413 4870 aa10.27□□□□□ -0.77
PRKCSH-209ENST00000589838 SEC61GP60059 68 aa10.19□□□□□ -0.78
PRKCSH-209ENST00000589838 UQCR11O14957 56 aa10.18□□□□□ -0.78
PRKCSH-209ENST00000589838 HSPG2P98160 4391 aa10.15□□□□□ -0.79
PRKCSH-209ENST00000589838 SPATA8Q6RVD6 105 aa10.15□□□□□ -0.79
PRKCSH-209ENST00000589838 KRTAP3-1Q9BYR8 98 aa10.14□□□□□ -0.79
PRKCSH-209ENST00000589838 FAT3Q8TDW7 4589 aa10.14□□□□□ -0.79
PRKCSH-209ENST00000589838 TNXBP22105 4242 aa10.13□□□□□ -0.79
PRKCSH-209ENST00000589838 COX6B2Q6YFQ2 88 aa10.13□□□□□ -0.79
PRKCSH-209ENST00000589838 A6NN06 94 aa10.12□□□□□ -0.79
PRKCSH-209ENST00000589838 RPL37P61927 97 aaKnown RBP10.1□□□□□ -0.79
PRKCSH-209ENST00000589838 MIR22HGQ0VDD5 57 aa10.1□□□□□ -0.79
PRKCSH-209ENST00000589838 RYR1P21817 5038 aa10.08□□□□□ -0.8
PRKCSH-209ENST00000589838 LRP1Q07954 4544 aaKnown RBP10.06□□□□□ -0.8
PRKCSH-209ENST00000589838 XP32Q5T750 250 aa10.04□□□□□ -0.8
PRKCSH-209ENST00000589838 KTN1-AS1Q86SY8 53 aa10.04□□□□□ -0.8
PRKCSH-209ENST00000589838 KRTAP17-1Q9BYP8 105 aa10.02□□□□□ -0.8
PRKCSH-209ENST00000589838 MT1HL1P0DM35 61 aa10.02□□□□□ -0.81
PRKCSH-209ENST00000589838 DMBT1Q9UGM3 2413 aaPredicted RBP9.97□□□□□ -0.81
PRKCSH-209ENST00000589838 EPPK1P58107 5090 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms