RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 DEFB116Q30KQ4 102 aa7.53□□□□□ -1.2
MBD1-220ENST00000589758 C14orf132Q9NPU4 83 aa7.53□□□□□ -1.2
MBD1-220ENST00000589758 IGKV4-1P06312 121 aa7.52□□□□□ -1.21
MBD1-220ENST00000589758 Q6ZQT0 140 aa7.51□□□□□ -1.21
MBD1-220ENST00000589758 H3BT86 120 aa7.5□□□□□ -1.21
MBD1-220ENST00000589758 LOC110117498A0A087WWA1 95 aa7.49□□□□□ -1.21
MBD1-220ENST00000589758 LINC00472Q9H8W2 130 aa7.48□□□□□ -1.21
MBD1-220ENST00000589758 PDE6GP18545 87 aa7.47□□□□□ -1.21
MBD1-220ENST00000589758 DSCR10P59022 87 aa7.47□□□□□ -1.21
MBD1-220ENST00000589758 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
MBD1-220ENST00000589758 FLGP20930 4061 aaPredicted RBP7.45□□□□□ -1.22
MBD1-220ENST00000589758 K7EP34 96 aa7.44□□□□□ -1.22
MBD1-220ENST00000589758 C21orf62-AS1Q17RA5 79 aa7.44□□□□□ -1.22
MBD1-220ENST00000589758 A8MUU9 505 aa7.43□□□□□ -1.22
MBD1-220ENST00000589758 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
MBD1-220ENST00000589758 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
MBD1-220ENST00000589758 LINC00313P59037 77 aa7.42□□□□□ -1.22
MBD1-220ENST00000589758 A0A1B0GW54 56 aa7.4□□□□□ -1.22
MBD1-220ENST00000589758 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.22
MBD1-220ENST00000589758 J3KT08 172 aa7.39□□□□□ -1.23
MBD1-220ENST00000589758 A0A1B0GVX0 72 aa7.38□□□□□ -1.23
MBD1-220ENST00000589758 GTF2H5Q6ZYL4 71 aa7.38□□□□□ -1.23
MBD1-220ENST00000589758 PRO0461Q9UI25 63 aa7.38□□□□□ -1.23
MBD1-220ENST00000589758 NREPQ16612 68 aa7.37□□□□□ -1.23
MBD1-220ENST00000589758 KRTAP16-1A8MUX0 517 aa7.35□□□□□ -1.23
MBD1-220ENST00000589758 NDUFB1O75438 58 aa7.34□□□□□ -1.23
MBD1-220ENST00000589758 C8orf87E5RJ46 101 aa7.33□□□□□ -1.24
MBD1-220ENST00000589758 A8MWP4 228 aa7.31□□□□□ -1.24
MBD1-220ENST00000589758 IGKV3D-7A0A0C4DH55 119 aa7.29□□□□□ -1.24
MBD1-220ENST00000589758 KRTAP9-7A8MTY7 169 aa7.29□□□□□ -1.24
MBD1-220ENST00000589758 F8W1H4 67 aa7.28□□□□□ -1.24
MBD1-220ENST00000589758 C8orf17Q9NRJ1 99 aa7.28□□□□□ -1.24
MBD1-220ENST00000589758 ETDBQ3ZM63 59 aa7.26□□□□□ -1.25
MBD1-220ENST00000589758 Q6ZVQ6 151 aa7.26□□□□□ -1.25
MBD1-220ENST00000589758 PRR15Q8IV56 129 aa7.26□□□□□ -1.25
MBD1-220ENST00000589758 FAM236DA0A1B0GTK5 79 aa7.25□□□□□ -1.25
MBD1-220ENST00000589758 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.25□□□□□ -1.25
MBD1-220ENST00000589758 BPY2O14599 106 aa7.25□□□□□ -1.25
MBD1-220ENST00000589758 FAM236CP0DP71 79 aa7.25□□□□□ -1.25
MBD1-220ENST00000589758 KRTAP9-8Q9BYQ0 159 aa7.25□□□□□ -1.25
MBD1-220ENST00000589758 K7EQZ3 153 aa7.23□□□□□ -1.25
MBD1-220ENST00000589758 LINC00846Q9NV44 126 aa7.23□□□□□ -1.25
MBD1-220ENST00000589758 RBM12B-AS1Q9P1G2 102 aa7.23□□□□□ -1.25
MBD1-220ENST00000589758 KRTAP3-3Q9BYR6 98 aa7.22□□□□□ -1.25
MBD1-220ENST00000589758 KRTAP3-2Q9BYR7 98 aa7.22□□□□□ -1.25
MBD1-220ENST00000589758 MMP24-AS1A0A0U1RRL7 71 aa7.2□□□□□ -1.26
MBD1-220ENST00000589758 Q8N9L7 120 aa7.2□□□□□ -1.26
MBD1-220ENST00000589758 UBL5Q9BZL1 73 aa7.2□□□□□ -1.26
MBD1-220ENST00000589758 HRES1P13985 223 aa7.19□□□□□ -1.26
MBD1-220ENST00000589758 MPLKIPQ8TAP9 179 aa7.19□□□□□ -1.26
MBD1-220ENST00000589758 Q8N9P0 234 aaPredicted RBP7.18□□□□□ -1.26
MBD1-220ENST00000589758 ZCCHC13Q8WW36 166 aaKnown RBP7.18□□□□□ -1.26
MBD1-220ENST00000589758 A0A1B0GV90 55 aa7.17□□□□□ -1.26
MBD1-220ENST00000589758 TMEM254Q8TBM7 123 aa7.17□□□□□ -1.26
MBD1-220ENST00000589758 hDV103S1A0JD37 113 aa7.16□□□□□ -1.26
MBD1-220ENST00000589758 MRPL34Q9BQ48 92 aaKnown RBP7.16□□□□□ -1.26
MBD1-220ENST00000589758 WFDC13Q8IUB5 93 aa7.15□□□□□ -1.26
MBD1-220ENST00000589758 NDUFS5O43920 106 aa7.14□□□□□ -1.27
MBD1-220ENST00000589758 MT2AP02795 61 aa7.12□□□□□ -1.27
MBD1-220ENST00000589758 CASC2Q6XLA1 102 aa7.11□□□□□ -1.27
MBD1-220ENST00000589758 SSPOA2VEC9 5147 aa7.09□□□□□ -1.28
MBD1-220ENST00000589758 SPINK7P58062 85 aa7.08□□□□□ -1.28
MBD1-220ENST00000589758 MT1FP04733 61 aa7.06□□□□□ -1.28
MBD1-220ENST00000589758 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
MBD1-220ENST00000589758 HCG22E2RYF7 251 aa7.05□□□□□ -1.28
MBD1-220ENST00000589758 ACYP1P07311 99 aa7.05□□□□□ -1.28
MBD1-220ENST00000589758 USH2AO75445 5202 aa7.04□□□□□ -1.28
MBD1-220ENST00000589758 CXCL6P80162 114 aa7.04□□□□□ -1.28
MBD1-220ENST00000589758 KRTAP9-3Q9BYQ3 159 aa7.03□□□□□ -1.28
MBD1-220ENST00000589758 FAM240AA0A1B0GVK7 77 aa7.01□□□□□ -1.29
MBD1-220ENST00000589758 LCE2BO14633 110 aa7.01□□□□□ -1.29
MBD1-220ENST00000589758 Q5W150 140 aa7□□□□□ -1.29
MBD1-220ENST00000589758 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
MBD1-220ENST00000589758 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
MBD1-220ENST00000589758 FCGBPQ9Y6R7 5405 aaPredicted RBP6.97□□□□□ -1.29
MBD1-220ENST00000589758 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
MBD1-220ENST00000589758 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
MBD1-220ENST00000589758 ATP5EP2Q5VTU8 51 aa6.93□□□□□ -1.3
MBD1-220ENST00000589758 C7orf65Q6ZTY9 151 aa6.92□□□□□ -1.3
MBD1-220ENST00000589758 LINC00643Q86TS7 51 aa6.9□□□□□ -1.3
MBD1-220ENST00000589758 J3QR89 54 aa6.88□□□□□ -1.31
MBD1-220ENST00000589758 TP53AIP1Q9HCN2 124 aa6.88□□□□□ -1.31
MBD1-220ENST00000589758 A0A087WVE0 104 aa6.85□□□□□ -1.31
MBD1-220ENST00000589758 H1FX-AS1Q4G0G2 97 aa6.85□□□□□ -1.31
MBD1-220ENST00000589758 C4orf26Q17RF5 130 aa6.82□□□□□ -1.32
MBD1-220ENST00000589758 KRTAP19-6Q3LI70 58 aa6.81□□□□□ -1.32
MBD1-220ENST00000589758 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
MBD1-220ENST00000589758 TRAV22A0A0B4J277 110 aa6.77□□□□□ -1.33
MBD1-220ENST00000589758 UQCRQO14949 82 aa6.75□□□□□ -1.33
MBD1-220ENST00000589758 SYNE2Q8WXH0 6885 aaKnown RBP6.74□□□□□ -1.33
MBD1-220ENST00000589758 H0Y9P7 68 aa6.73□□□□□ -1.33
MBD1-220ENST00000589758 CYP4F30PQ9H0H9 118 aa6.73□□□□□ -1.33
MBD1-220ENST00000589758 C1orf64Q8NEQ6 169 aa6.72□□□□□ -1.33
MBD1-220ENST00000589758 LOC101927531A0A1B0GV80 90 aa6.71□□□□□ -1.34
MBD1-220ENST00000589758 K7ERU9 68 aa6.71□□□□□ -1.34
MBD1-220ENST00000589758 KRTAP3-1Q9BYR8 98 aa6.69□□□□□ -1.34
MBD1-220ENST00000589758 ATOX1O00244 68 aa6.68□□□□□ -1.34
MBD1-220ENST00000589758 OCR1Q9BZK8 76 aa6.66□□□□□ -1.34
MBD1-220ENST00000589758 MT-ATP8P03928 68 aa6.65□□□□□ -1.34
MBD1-220ENST00000589758 SCGB1A1P11684 91 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms