RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 SPENQ96T58 3664 aaKnown RBP8.55□□□□□ -1.04
SMARCA4-214ENST00000589677 COL6A5A8TX70 2615 aa8.54□□□□□ -1.04
SMARCA4-214ENST00000589677 NOTCH2NLQ7Z3S9 236 aa8.53□□□□□ -1.04
SMARCA4-214ENST00000589677 TEX15Q9BXT5 2789 aa8.52□□□□□ -1.05
SMARCA4-214ENST00000589677 PANO1I0J062 215 aa8.51□□□□□ -1.05
SMARCA4-214ENST00000589677 CRYBG3Q68DQ2 2970 aa8.51□□□□□ -1.05
SMARCA4-214ENST00000589677 ZANQ9Y493 2812 aa8.51□□□□□ -1.05
SMARCA4-214ENST00000589677 R4GN34 69 aa8.5□□□□□ -1.05
SMARCA4-214ENST00000589677 UTP20O75691 2785 aaKnown RBP8.49□□□□□ -1.05
SMARCA4-214ENST00000589677 BSNQ9UPA5 3926 aa8.47□□□□□ -1.05
SMARCA4-214ENST00000589677 KRTAP7-1Q8IUC3 87 aa8.43□□□□□ -1.06
SMARCA4-214ENST00000589677 KRTAP21-3Q3LHN1 58 aa8.43□□□□□ -1.06
SMARCA4-214ENST00000589677 CELSR2Q9HCU4 2923 aa8.39□□□□□ -1.07
SMARCA4-214ENST00000589677 NDUFAF8A1L188 74 aa8.38□□□□□ -1.07
SMARCA4-214ENST00000589677 KRTAP11-1Q8IUC1 163 aa8.37□□□□□ -1.07
SMARCA4-214ENST00000589677 CSMD1Q96PZ7 3565 aa8.37□□□□□ -1.07
SMARCA4-214ENST00000589677 M0QZ58 72 aa8.36□□□□□ -1.07
SMARCA4-214ENST00000589677 APCP25054 2843 aa8.35□□□□□ -1.07
SMARCA4-214ENST00000589677 ITPR2Q14571 2701 aa8.34□□□□□ -1.07
SMARCA4-214ENST00000589677 CELSR1Q9NYQ6 3014 aa8.34□□□□□ -1.07
SMARCA4-214ENST00000589677 KRTAP13-1Q8IUC0 172 aa8.32□□□□□ -1.08
SMARCA4-214ENST00000589677 SVEP1Q4LDE5 3571 aa8.32□□□□□ -1.08
SMARCA4-214ENST00000589677 UBR5O95071 2799 aaPredicted RBP8.31□□□□□ -1.08
SMARCA4-214ENST00000589677 NOTCH1P46531 2555 aa8.3□□□□□ -1.08
SMARCA4-214ENST00000589677 A8MUU9 505 aa8.3□□□□□ -1.08
SMARCA4-214ENST00000589677 MXRA5Q9NR99 2828 aa8.29□□□□□ -1.08
SMARCA4-214ENST00000589677 RPS29P62273 56 aaKnown RBP8.28□□□□□ -1.08
SMARCA4-214ENST00000589677 NF1P21359 2839 aa8.28□□□□□ -1.08
SMARCA4-214ENST00000589677 KRTAP10-1P60331 282 aa8.28□□□□□ -1.08
SMARCA4-214ENST00000589677 FBN2P35556 2912 aa8.26□□□□□ -1.09
SMARCA4-214ENST00000589677 NBEAL1Q6ZS30 2694 aa8.26□□□□□ -1.09
SMARCA4-214ENST00000589677 KRTAP10-2P60368 255 aa8.23□□□□□ -1.09
SMARCA4-214ENST00000589677 SEC61BP60468 96 aaKnown RBP8.18□□□□□ -1.1
SMARCA4-214ENST00000589677 NBEAL2Q6ZNJ1 2754 aa8.18□□□□□ -1.1
SMARCA4-214ENST00000589677 DMBT1Q9UGM3 2413 aaPredicted RBP8.18□□□□□ -1.1
SMARCA4-214ENST00000589677 PLAC4Q8WY50 150 aa8.16□□□□□ -1.1
SMARCA4-214ENST00000589677 Q6ZRN7 208 aaPredicted RBP8.16□□□□□ -1.1
SMARCA4-214ENST00000589677 KRTAP13-2Q52LG2 175 aa8.13□□□□□ -1.11
SMARCA4-214ENST00000589677 C20orf166-AS1Q96NR2 134 aa8.1□□□□□ -1.11
SMARCA4-214ENST00000589677 NSD1Q96L73 2696 aaPredicted RBP8.1□□□□□ -1.11
SMARCA4-214ENST00000589677 CSMD2Q7Z408 3487 aa8.09□□□□□ -1.11
SMARCA4-214ENST00000589677 M0R2T5 61 aa8.08□□□□□ -1.12
SMARCA4-214ENST00000589677 HIVEP1P15822 2718 aa8.07□□□□□ -1.12
SMARCA4-214ENST00000589677 TENM4Q6N022 2769 aa8.07□□□□□ -1.12
SMARCA4-214ENST00000589677 KMT2BQ9UMN6 2715 aaPredicted RBP8.07□□□□□ -1.12
SMARCA4-214ENST00000589677 FLG2Q5D862 2391 aaPredicted RBP8.05□□□□□ -1.12
SMARCA4-214ENST00000589677 Q5VSD8 79 aa8.02□□□□□ -1.13
SMARCA4-214ENST00000589677 H0YAA0 97 aa8.01□□□□□ -1.13
SMARCA4-214ENST00000589677 VPS13CQ709C8 3753 aa7.99□□□□□ -1.13
SMARCA4-214ENST00000589677 PDZD2O15018 2839 aa7.96□□□□□ -1.14
SMARCA4-214ENST00000589677 NIPBLQ6KC79 2804 aaeCLIP7.94□□□□□ -1.144e-6■□□□□ 9.9
SMARCA4-214ENST00000589677 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
SMARCA4-214ENST00000589677 STAB2Q8WWQ8 2551 aa7.92□□□□□ -1.14
SMARCA4-214ENST00000589677 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
SMARCA4-214ENST00000589677 CUBNO60494 3623 aa7.89□□□□□ -1.15
SMARCA4-214ENST00000589677 P0C880 135 aa7.88□□□□□ -1.15
SMARCA4-214ENST00000589677 NBPF19A0A087WUL8 3843 aa7.87□□□□□ -1.15
SMARCA4-214ENST00000589677 ZFHX3Q15911 3703 aa7.87□□□□□ -1.15
SMARCA4-214ENST00000589677 TNP1P09430 55 aa7.85□□□□□ -1.15
SMARCA4-214ENST00000589677 OTOGQ6ZRI0 2925 aa7.84□□□□□ -1.15
SMARCA4-214ENST00000589677 TENM1Q9UKZ4 2725 aa7.82□□□□□ -1.16
SMARCA4-214ENST00000589677 VWFP04275 2813 aa7.81□□□□□ -1.16
SMARCA4-214ENST00000589677 KRTAP13-3Q3SY46 172 aa7.75□□□□□ -1.17
SMARCA4-214ENST00000589677 ZNF469Q96JG9 3925 aaPredicted RBP7.73□□□□□ -1.17
SMARCA4-214ENST00000589677 KRTAP1-4P0C5Y4 121 aa7.71□□□□□ -1.17
SMARCA4-214ENST00000589677 ANK3Q12955 4377 aaKnown RBP7.67□□□□□ -1.18
SMARCA4-214ENST00000589677 TENM3Q9P273 2699 aa7.61□□□□□ -1.19
SMARCA4-214ENST00000589677 KRTAP10-8P60410 259 aa7.59□□□□□ -1.19
SMARCA4-214ENST00000589677 XP32Q5T750 250 aa7.56□□□□□ -1.2
SMARCA4-214ENST00000589677 FBN1P35555 2871 aaKnown RBP7.54□□□□□ -1.2
SMARCA4-214ENST00000589677 TRRAPQ9Y4A5 3859 aa7.52□□□□□ -1.21
SMARCA4-214ENST00000589677 AKAP9Q99996 3911 aa7.5□□□□□ -1.21
SMARCA4-214ENST00000589677 PKD1L1Q8TDX9 2849 aa7.49□□□□□ -1.21
SMARCA4-214ENST00000589677 TPRXLQ17RH7 258 aa7.44□□□□□ -1.22
SMARCA4-214ENST00000589677 KRTAP12-2P59991 146 aa7.4□□□□□ -1.23
SMARCA4-214ENST00000589677 KRTAP12-1P59990 96 aa7.3□□□□□ -1.24
SMARCA4-214ENST00000589677 TGP01266 2768 aa7.28□□□□□ -1.24
SMARCA4-214ENST00000589677 KRTAP13-4Q3LI77 160 aa7.26□□□□□ -1.25
SMARCA4-214ENST00000589677 TENM2Q9NT68 2774 aa7.26□□□□□ -1.25
SMARCA4-214ENST00000589677 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
SMARCA4-214ENST00000589677 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
SMARCA4-214ENST00000589677 A0A1B0GVY2 172 aa7.16□□□□□ -1.26
SMARCA4-214ENST00000589677 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
SMARCA4-214ENST00000589677 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
SMARCA4-214ENST00000589677 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
SMARCA4-214ENST00000589677 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
SMARCA4-214ENST00000589677 INE1O15225 51 aa6.94□□□□□ -1.3
SMARCA4-214ENST00000589677 SRRM2Q9UQ35 2752 aaKnown RBP6.93□□□□□ -1.3
SMARCA4-214ENST00000589677 COL7A1Q02388 2944 aa6.92□□□□□ -1.3
SMARCA4-214ENST00000589677 ANK2Q01484 3957 aa6.87□□□□□ -1.31
SMARCA4-214ENST00000589677 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
SMARCA4-214ENST00000589677 FBN3Q75N90 2809 aa6.83□□□□□ -1.32
SMARCA4-214ENST00000589677 DNAH9Q9NYC9 4486 aa6.82□□□□□ -1.32
SMARCA4-214ENST00000589677 MEGF8Q7Z7M0 2845 aa6.81□□□□□ -1.32
SMARCA4-214ENST00000589677 CSMD3Q7Z407 3707 aa6.81□□□□□ -1.32
SMARCA4-214ENST00000589677 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
SMARCA4-214ENST00000589677 CMYA5Q8N3K9 4069 aa6.76□□□□□ -1.33
SMARCA4-214ENST00000589677 DNAH3Q8TD57 4116 aa6.75□□□□□ -1.33
SMARCA4-214ENST00000589677 DNAH10Q8IVF4 4471 aa6.72□□□□□ -1.33
SMARCA4-214ENST00000589677 PLECQ15149 4684 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms