RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 NDUFB1O75438 58 aa8.85□□□□□ -0.99
CCDC43-203ENST00000588210 CYP4F30PQ9H0H9 118 aa8.85□□□□□ -0.99
CCDC43-203ENST00000588210 MP68P56378 58 aa8.84□□□□□ -0.99
CCDC43-203ENST00000588210 PCLOQ9Y6V0 5065 aa8.84□□□□□ -0.99
CCDC43-203ENST00000588210 CASC2Q6XLA1 102 aa8.83□□□□□ -1
CCDC43-203ENST00000588210 PRO0628Q9UI54 55 aa8.83□□□□□ -1
CCDC43-203ENST00000588210 C1orf64Q8NEQ6 169 aa8.82□□□□□ -1
CCDC43-203ENST00000588210 MPLKIPQ8TAP9 179 aa8.82□□□□□ -1
CCDC43-203ENST00000588210 TRAV22A0A0B4J277 110 aa8.81□□□□□ -1
CCDC43-203ENST00000588210 KRTAP10-4P60372 401 aaPredicted RBP8.81□□□□□ -1
CCDC43-203ENST00000588210 H3BPC8 53 aa8.8□□□□□ -1
CCDC43-203ENST00000588210 H0Y9P7 68 aa8.77□□□□□ -1
CCDC43-203ENST00000588210 LINC00208Q96KT6 92 aa8.77□□□□□ -1
CCDC43-203ENST00000588210 SRRM2Q9UQ35 2752 aaKnown RBP8.77□□□□□ -1.01
CCDC43-203ENST00000588210 MMP24-AS1A0A0U1RRL7 71 aa8.76□□□□□ -1.01
CCDC43-203ENST00000588210 LINC00483Q53H64 154 aa8.75□□□□□ -1.01
CCDC43-203ENST00000588210 Q1T7F1 81 aa8.74□□□□□ -1.01
CCDC43-203ENST00000588210 SPANXA2-OT1Q8N9U9 137 aa8.74□□□□□ -1.01
CCDC43-203ENST00000588210 PRR4Q16378 134 aa8.73□□□□□ -1.01
CCDC43-203ENST00000588210 PSORS1C2Q9UIG4 136 aa8.73□□□□□ -1.01
CCDC43-203ENST00000588210 Q96NJ1 140 aa8.73□□□□□ -1.01
CCDC43-203ENST00000588210 IGLV9-49A0A0B4J1Y8 123 aa8.71□□□□□ -1.02
CCDC43-203ENST00000588210 ZNF706Q9Y5V0 76 aaPredicted RBP8.71□□□□□ -1.02
CCDC43-203ENST00000588210 BRK1Q8WUW1 75 aa8.7□□□□□ -1.02
CCDC43-203ENST00000588210 PKHD1L1Q86WI1 4243 aa8.7□□□□□ -1.02
CCDC43-203ENST00000588210 MOBPQ13875 183 aa8.69□□□□□ -1.02
CCDC43-203ENST00000588210 ASB16-AS1Q495Z4 193 aa8.69□□□□□ -1.02
CCDC43-203ENST00000588210 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
CCDC43-203ENST00000588210 IGLV7-43P04211 117 aa8.65□□□□□ -1.02
CCDC43-203ENST00000588210 TP53AIP1Q9HCN2 124 aa8.65□□□□□ -1.02
CCDC43-203ENST00000588210 C8orf17Q9NRJ1 99 aa8.64□□□□□ -1.03
CCDC43-203ENST00000588210 MYCBP2O75592 4640 aa8.63□□□□□ -1.03
CCDC43-203ENST00000588210 FLG2Q5D862 2391 aaPredicted RBP8.63□□□□□ -1.03
CCDC43-203ENST00000588210 V9GYY9 64 aa8.63□□□□□ -1.03
CCDC43-203ENST00000588210 A0A1B0GVX0 72 aa8.61□□□□□ -1.03
CCDC43-203ENST00000588210 ZNF861PO60384 105 aa8.61□□□□□ -1.03
CCDC43-203ENST00000588210 IGLV7-46A0A075B6I9 117 aa8.58□□□□□ -1.04
CCDC43-203ENST00000588210 FAT3Q8TDW7 4589 aa8.58□□□□□ -1.04
CCDC43-203ENST00000588210 IGHV6-1A0A0B4J1U7 121 aa8.57□□□□□ -1.04
CCDC43-203ENST00000588210 PSPHP1O15172 72 aa8.57□□□□□ -1.04
CCDC43-203ENST00000588210 LRP1Q07954 4544 aaKnown RBP8.57□□□□□ -1.04
CCDC43-203ENST00000588210 C1orf195Q5TG92 126 aa8.55□□□□□ -1.04
CCDC43-203ENST00000588210 MRPL34Q9BQ48 92 aaKnown RBP8.55□□□□□ -1.04
CCDC43-203ENST00000588210 ANAPC11Q9NYG5 84 aa8.55□□□□□ -1.04
CCDC43-203ENST00000588210 J3QL48 77 aa8.53□□□□□ -1.04
CCDC43-203ENST00000588210 CD164Q04900 197 aa8.53□□□□□ -1.04
CCDC43-203ENST00000588210 Q8N9P0 234 aaPredicted RBP8.53□□□□□ -1.04
CCDC43-203ENST00000588210 A8MUN3 132 aa8.52□□□□□ -1.05
CCDC43-203ENST00000588210 COA5Q86WW8 74 aa8.52□□□□□ -1.05
CCDC43-203ENST00000588210 LIMD2Q9BT23 127 aa8.52□□□□□ -1.05
CCDC43-203ENST00000588210 NDUFS5O43920 106 aa8.52□□□□□ -1.05
CCDC43-203ENST00000588210 PCOTHQ58A44 107 aa8.52□□□□□ -1.05
CCDC43-203ENST00000588210 Q5VV11 94 aa8.5□□□□□ -1.05
CCDC43-203ENST00000588210 A0A087X002 238 aa8.49□□□□□ -1.05
CCDC43-203ENST00000588210 NOTCH2NLQ7Z3S9 236 aa8.49□□□□□ -1.05
CCDC43-203ENST00000588210 KRTAP1-4P0C5Y4 121 aa8.47□□□□□ -1.05
CCDC43-203ENST00000588210 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
CCDC43-203ENST00000588210 TNXBP22105 4242 aa8.46□□□□□ -1.06
CCDC43-203ENST00000588210 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
CCDC43-203ENST00000588210 KRTAP10-8P60410 259 aa8.44□□□□□ -1.06
CCDC43-203ENST00000588210 PRR15LQ9BU68 103 aa8.44□□□□□ -1.06
CCDC43-203ENST00000588210 LOC101927531A0A1B0GV80 90 aa8.43□□□□□ -1.06
CCDC43-203ENST00000588210 SSBP3-AS1Q7Z2R9 100 aa8.43□□□□□ -1.06
CCDC43-203ENST00000588210 KRTAP13-3Q3SY46 172 aa8.42□□□□□ -1.06
CCDC43-203ENST00000588210 HERC1Q15751 4861 aa8.42□□□□□ -1.06
CCDC43-203ENST00000588210 PRR26Q8N8Z3 221 aa8.41□□□□□ -1.06
CCDC43-203ENST00000588210 C8orf87E5RJ46 101 aa8.41□□□□□ -1.06
CCDC43-203ENST00000588210 Q75L30 129 aa8.4□□□□□ -1.06
CCDC43-203ENST00000588210 CHKB-CPT1BH3BT56 60 aa8.39□□□□□ -1.07
CCDC43-203ENST00000588210 HRES1P13985 223 aa8.38□□□□□ -1.07
CCDC43-203ENST00000588210 Q5W150 140 aa8.38□□□□□ -1.07
CCDC43-203ENST00000588210 LINC01558Q9Y6Z2 57 aa8.36□□□□□ -1.07
CCDC43-203ENST00000588210 A8MU10 97 aa8.32□□□□□ -1.08
CCDC43-203ENST00000588210 SPAG11AQ6PDA7 123 aa8.32□□□□□ -1.08
CCDC43-203ENST00000588210 TYMSOSQ8TAI1 123 aa8.32□□□□□ -1.08
CCDC43-203ENST00000588210 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
CCDC43-203ENST00000588210 A6NED7 52 aa8.29□□□□□ -1.08
CCDC43-203ENST00000588210 LINC00313P59037 77 aa8.29□□□□□ -1.08
CCDC43-203ENST00000588210 LCA10Q71F78 164 aa8.27□□□□□ -1.09
CCDC43-203ENST00000588210 PMAIP1Q13794 54 aa8.26□□□□□ -1.09
CCDC43-203ENST00000588210 CDC42SE1Q9NRR8 79 aa8.25□□□□□ -1.09
CCDC43-203ENST00000588210 ACYP2P14621 99 aa8.24□□□□□ -1.09
CCDC43-203ENST00000588210 DMAC1Q96GE9 116 aa8.23□□□□□ -1.09
CCDC43-203ENST00000588210 KRTAP16-1A8MUX0 517 aa8.23□□□□□ -1.09
CCDC43-203ENST00000588210 ATP11AUNQ6ZP68 121 aa8.22□□□□□ -1.09
CCDC43-203ENST00000588210 LINC00304Q8N9R0 145 aa8.22□□□□□ -1.09
CCDC43-203ENST00000588210 HMCN2Q8NDA2 5059 aa8.22□□□□□ -1.09
CCDC43-203ENST00000588210 IGKV2-30P06310 120 aa8.22□□□□□ -1.09
CCDC43-203ENST00000588210 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
CCDC43-203ENST00000588210 SPTSSBQ8NFR3 76 aa8.17□□□□□ -1.1
CCDC43-203ENST00000588210 SPINK7P58062 85 aa8.16□□□□□ -1.1
CCDC43-203ENST00000588210 RETNLBQ9BQ08 111 aa8.16□□□□□ -1.1
CCDC43-203ENST00000588210 SPINK1P00995 79 aa8.13□□□□□ -1.11
CCDC43-203ENST00000588210 A6NN06 94 aa8.12□□□□□ -1.11
CCDC43-203ENST00000588210 RPS29P62273 56 aaKnown RBP8.1□□□□□ -1.11
CCDC43-203ENST00000588210 KTN1-AS1Q86SY8 53 aa8.09□□□□□ -1.11
CCDC43-203ENST00000588210 IGKV2D-30A0A075B6S6 120 aa8.06□□□□□ -1.12
CCDC43-203ENST00000588210 SEC61GP60059 68 aa8.04□□□□□ -1.12
CCDC43-203ENST00000588210 A0A1B0GU69 56 aa8.02□□□□□ -1.12
CCDC43-203ENST00000588210 LRP2P98164 4655 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms