RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 NAA38Q9BRA0 125 aaKnown RBP3.38□□□□□ -1.87
SDF2-205ENST00000587629 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
SDF2-205ENST00000587629 H3BT86 120 aa3.37□□□□□ -1.87
SDF2-205ENST00000587629 ACYP1P07311 99 aa3.37□□□□□ -1.87
SDF2-205ENST00000587629 SMIM11BQ8TCY0 68 aa3.37□□□□□ -1.87
SDF2-205ENST00000587629 A4D1N5 150 aa3.36□□□□□ -1.87
SDF2-205ENST00000587629 F8WEM9 126 aa3.36□□□□□ -1.87
SDF2-205ENST00000587629 ANKRD29Q8N6D5 301 aa3.36□□□□□ -1.87
SDF2-205ENST00000587629 OBSCN-AS1Q96MR7 158 aa3.36□□□□□ -1.87
SDF2-205ENST00000587629 FAM240AA0A1B0GVK7 77 aa3.35□□□□□ -1.87
SDF2-205ENST00000587629 TRAV13-2A0A0B4J235 113 aa3.34□□□□□ -1.87
SDF2-205ENST00000587629 SNCGO76070 127 aa3.34□□□□□ -1.87
SDF2-205ENST00000587629 ATP11AUNQ6ZP68 121 aa3.34□□□□□ -1.87
SDF2-205ENST00000587629 IMUPQ9GZP8 106 aa3.34□□□□□ -1.87
SDF2-205ENST00000587629 TRBV7-7A0A0K0K1E9 115 aa3.33□□□□□ -1.88
SDF2-205ENST00000587629 C9JAW5 83 aa3.33□□□□□ -1.88
SDF2-205ENST00000587629 IGFL1Q6UW32 110 aa3.33□□□□□ -1.88
SDF2-205ENST00000587629 LINC00575Q6W349 94 aa3.33□□□□□ -1.88
SDF2-205ENST00000587629 Q6ZQY7 126 aa3.33□□□□□ -1.88
SDF2-205ENST00000587629 hADV29S1A0JD25 119 aa3.32□□□□□ -1.88
SDF2-205ENST00000587629 LST1O00453 97 aa3.32□□□□□ -1.88
SDF2-205ENST00000587629 CLEC2BQ92478 149 aa3.32□□□□□ -1.88
SDF2-205ENST00000587629 Q96NJ1 140 aa3.32□□□□□ -1.88
SDF2-205ENST00000587629 TRACP01848 142 aa3.31□□□□□ -1.88
SDF2-205ENST00000587629 Q6JHZ5 121 aa3.31□□□□□ -1.88
SDF2-205ENST00000587629 Q75L30 129 aa3.31□□□□□ -1.88
SDF2-205ENST00000587629 H0YGX0 51 aa3.3□□□□□ -1.88
SDF2-205ENST00000587629 TRIAP1O43715 76 aa3.3□□□□□ -1.88
SDF2-205ENST00000587629 ANAPC13Q9BS18 74 aa3.3□□□□□ -1.88
SDF2-205ENST00000587629 A0A1B0GX51 115 aa3.29□□□□□ -1.88
SDF2-205ENST00000587629 MT-ATP8P03928 68 aa3.29□□□□□ -1.88
SDF2-205ENST00000587629 H3BQ85 93 aa3.28□□□□□ -1.88
SDF2-205ENST00000587629 NDUFV3P56181 108 aaKnown RBP3.27□□□□□ -1.89
SDF2-205ENST00000587629 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.27□□□□□ -1.89
SDF2-205ENST00000587629 LINC00643Q86TS7 51 aa3.27□□□□□ -1.89
SDF2-205ENST00000587629 DNAL4O96015 105 aa3.26□□□□□ -1.89
SDF2-205ENST00000587629 DSCR10P59022 87 aa3.26□□□□□ -1.89
SDF2-205ENST00000587629 A8MUU9 505 aa3.25□□□□□ -1.89
SDF2-205ENST00000587629 BAALC-AS2P0C853 105 aa3.25□□□□□ -1.89
SDF2-205ENST00000587629 C20orf166-AS1Q96NR2 134 aa3.25□□□□□ -1.89
SDF2-205ENST00000587629 A0A087WSZ3 146 aa3.24□□□□□ -1.89
SDF2-205ENST00000587629 FAM236DA0A1B0GTK5 79 aa3.24□□□□□ -1.89
SDF2-205ENST00000587629 JMJD7-PLA2G4BH0Y9G9 81 aa3.24□□□□□ -1.89
SDF2-205ENST00000587629 FAM236CP0DP71 79 aa3.24□□□□□ -1.89
SDF2-205ENST00000587629 SS18L2Q9UHA2 77 aa3.24□□□□□ -1.89
SDF2-205ENST00000587629 USH2AO75445 5202 aa3.23□□□□□ -1.89
SDF2-205ENST00000587629 KRTAP16-1A8MUX0 517 aa3.23□□□□□ -1.89
SDF2-205ENST00000587629 MT2AP02795 61 aa3.23□□□□□ -1.89
SDF2-205ENST00000587629 FAM218AQ96MZ4 157 aa3.23□□□□□ -1.89
SDF2-205ENST00000587629 TMEM256-PLSCR3K7ERE1 68 aa3.22□□□□□ -1.89
SDF2-205ENST00000587629 UQCRQO14949 82 aa3.22□□□□□ -1.89
SDF2-205ENST00000587629 PDE6GP18545 87 aa3.22□□□□□ -1.89
SDF2-205ENST00000587629 ATP5EP2Q5VTU8 51 aa3.22□□□□□ -1.89
SDF2-205ENST00000587629 SSPOA2VEC9 5147 aa3.22□□□□□ -1.89
SDF2-205ENST00000587629 ATOX1O00244 68 aa3.21□□□□□ -1.9
SDF2-205ENST00000587629 MT1FP04733 61 aa3.21□□□□□ -1.9
SDF2-205ENST00000587629 LINC00313P59037 77 aa3.21□□□□□ -1.9
SDF2-205ENST00000587629 KRTAP10-10P60014 251 aa3.21□□□□□ -1.9
SDF2-205ENST00000587629 ORMDL1Q9P0S3 153 aa3.21□□□□□ -1.9
SDF2-205ENST00000587629 IGKV4-1P06312 121 aa3.2□□□□□ -1.9
SDF2-205ENST00000587629 DEFB116Q30KQ4 102 aa3.2□□□□□ -1.9
SDF2-205ENST00000587629 NOTCH2NLQ7Z3S9 236 aa3.2□□□□□ -1.9
SDF2-205ENST00000587629 A0A1W2PNM2 257 aa3.19□□□□□ -1.9
SDF2-205ENST00000587629 SMIM20Q8N5G0 67 aa3.19□□□□□ -1.9
SDF2-205ENST00000587629 RBM12B-AS1Q9P1G2 102 aa3.19□□□□□ -1.9
SDF2-205ENST00000587629 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
SDF2-205ENST00000587629 FAM236AA0A1B0GUQ0 79 aa3.18□□□□□ -1.9
SDF2-205ENST00000587629 FAM236BA0A1B0GV22 79 aa3.18□□□□□ -1.9
SDF2-205ENST00000587629 CCKP06307 115 aa3.18□□□□□ -1.9
SDF2-205ENST00000587629 HRES1P13985 223 aa3.18□□□□□ -1.9
SDF2-205ENST00000587629 COX7CP15954 63 aa3.18□□□□□ -1.9
SDF2-205ENST00000587629 HIST1H4AP62805 103 aaKnown RBP3.18□□□□□ -1.9
SDF2-205ENST00000587629 RPS28P62857 69 aaKnown RBP3.18□□□□□ -1.9
SDF2-205ENST00000587629 KRTAP15-1Q3LI76 137 aa3.18□□□□□ -1.9
SDF2-205ENST00000587629 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
SDF2-205ENST00000587629 IGHV6-1A0A0B4J1U7 121 aa3.17□□□□□ -1.9
SDF2-205ENST00000587629 UBL5Q9BZL1 73 aa3.17□□□□□ -1.9
SDF2-205ENST00000587629 CCDC179H3BU77 68 aa3.16□□□□□ -1.9
SDF2-205ENST00000587629 SERP2Q8N6R1 65 aa3.16□□□□□ -1.9
SDF2-205ENST00000587629 MPLKIPQ8TAP9 179 aa3.16□□□□□ -1.9
SDF2-205ENST00000587629 LOC110117498A0A087WWA1 95 aa3.15□□□□□ -1.91
SDF2-205ENST00000587629 TRBV7-4A0A0J9YYF1 115 aa3.15□□□□□ -1.91
SDF2-205ENST00000587629 A0A1B0GW54 56 aa3.15□□□□□ -1.91
SDF2-205ENST00000587629 RBM3P98179 157 aaKnown RBP3.15□□□□□ -1.91
SDF2-205ENST00000587629 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
SDF2-205ENST00000587629 KRTAP23-1A1A580 65 aa3.14□□□□□ -1.91
SDF2-205ENST00000587629 TMEM258P61165 79 aa3.14□□□□□ -1.91
SDF2-205ENST00000587629 DSCR8Q96T75 97 aa3.14□□□□□ -1.91
SDF2-205ENST00000587629 LINC00472Q9H8W2 130 aa3.14□□□□□ -1.91
SDF2-205ENST00000587629 C14orf132Q9NPU4 83 aa3.14□□□□□ -1.91
SDF2-205ENST00000587629 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
SDF2-205ENST00000587629 J3KT08 172 aa3.13□□□□□ -1.91
SDF2-205ENST00000587629 LINC00846Q9NV44 126 aa3.13□□□□□ -1.91
SDF2-205ENST00000587629 CXCL6P80162 114 aa3.12□□□□□ -1.91
SDF2-205ENST00000587629 A0A1B0GVX0 72 aa3.11□□□□□ -1.91
SDF2-205ENST00000587629 NDUFC1O43677 76 aa3.11□□□□□ -1.91
SDF2-205ENST00000587629 SPINK7P58062 85 aa3.11□□□□□ -1.91
SDF2-205ENST00000587629 Q6ZQT0 140 aa3.11□□□□□ -1.91
SDF2-205ENST00000587629 TRAV7A0A075B6U4 112 aa3.1□□□□□ -1.91
SDF2-205ENST00000587629 ZCCHC13Q8WW36 166 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 746 ms