RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 NDUFB1O75438 58 aa10.53□□□□□ -0.72
VAT1-203ENST00000587062 Q6ZQT0 140 aa10.53□□□□□ -0.72
VAT1-203ENST00000587062 LOC110117498A0A087WWA1 95 aa10.52□□□□□ -0.73
VAT1-203ENST00000587062 A0A1B0GVX0 72 aa10.51□□□□□ -0.73
VAT1-203ENST00000587062 KRTAP16-1A8MUX0 517 aa10.48□□□□□ -0.73
VAT1-203ENST00000587062 C9orf118A6NHY6 69 aa10.46□□□□□ -0.73
VAT1-203ENST00000587062 NOTCH2NLQ7Z3S9 236 aa10.46□□□□□ -0.73
VAT1-203ENST00000587062 C14orf132Q9NPU4 83 aa10.46□□□□□ -0.73
VAT1-203ENST00000587062 LCE2DQ5TA82 110 aaPredicted RBP10.44□□□□□ -0.74
VAT1-203ENST00000587062 H3BT86 120 aa10.41□□□□□ -0.74
VAT1-203ENST00000587062 NREPQ16612 68 aa10.41□□□□□ -0.74
VAT1-203ENST00000587062 A0A1W2PPM0 123 aa10.4□□□□□ -0.74
VAT1-203ENST00000587062 KRTAP10-6P60371 365 aaPredicted RBP10.4□□□□□ -0.74
VAT1-203ENST00000587062 A8MWP4 228 aa10.39□□□□□ -0.75
VAT1-203ENST00000587062 RBM12B-AS1Q9P1G2 102 aa10.38□□□□□ -0.75
VAT1-203ENST00000587062 FAM236DA0A1B0GTK5 79 aa10.37□□□□□ -0.75
VAT1-203ENST00000587062 TAX1BP3O14907 124 aa10.37□□□□□ -0.75
VAT1-203ENST00000587062 FAM236CP0DP71 79 aa10.37□□□□□ -0.75
VAT1-203ENST00000587062 LORP23490 312 aaPredicted RBP10.37□□□□□ -0.75
VAT1-203ENST00000587062 C8orf17Q9NRJ1 99 aa10.33□□□□□ -0.76
VAT1-203ENST00000587062 ZCCHC13Q8WW36 166 aaKnown RBP10.32□□□□□ -0.76
VAT1-203ENST00000587062 KRTAP9-6A0A140TA67 174 aa10.31□□□□□ -0.76
VAT1-203ENST00000587062 MTURNQ8N3F0 131 aa10.31□□□□□ -0.76
VAT1-203ENST00000587062 Q8N9P0 234 aaPredicted RBP10.3□□□□□ -0.76
VAT1-203ENST00000587062 IGKV3D-7A0A0C4DH55 119 aa10.29□□□□□ -0.76
VAT1-203ENST00000587062 PRR15Q8IV56 129 aa10.28□□□□□ -0.76
VAT1-203ENST00000587062 SPCS1Q9Y6A9 102 aa10.28□□□□□ -0.76
VAT1-203ENST00000587062 Q6ZVQ6 151 aa10.27□□□□□ -0.77
VAT1-203ENST00000587062 COL5A1-AS1Q5SY13 56 aa10.24□□□□□ -0.77
VAT1-203ENST00000587062 HRES1P13985 223 aa10.23□□□□□ -0.77
VAT1-203ENST00000587062 PCP4L1A6NKN8 68 aa10.22□□□□□ -0.77
VAT1-203ENST00000587062 BPY2O14599 106 aa10.21□□□□□ -0.77
VAT1-203ENST00000587062 SPINK7P58062 85 aa10.21□□□□□ -0.77
VAT1-203ENST00000587062 TMEM254Q8TBM7 123 aa10.2□□□□□ -0.78
VAT1-203ENST00000587062 MPLKIPQ8TAP9 179 aa10.19□□□□□ -0.78
VAT1-203ENST00000587062 MRPL34Q9BQ48 92 aaKnown RBP10.19□□□□□ -0.78
VAT1-203ENST00000587062 FLGP20930 4061 aaPredicted RBP10.17□□□□□ -0.78
VAT1-203ENST00000587062 hDV103S1A0JD37 113 aa10.17□□□□□ -0.78
VAT1-203ENST00000587062 K7EQZ3 153 aa10.15□□□□□ -0.78
VAT1-203ENST00000587062 NDUFS5O43920 106 aa10.15□□□□□ -0.78
VAT1-203ENST00000587062 MMP24-AS1A0A0U1RRL7 71 aa10.14□□□□□ -0.79
VAT1-203ENST00000587062 CRCT1Q9UGL9 99 aa10.13□□□□□ -0.79
VAT1-203ENST00000587062 K7EP34 96 aa10.09□□□□□ -0.79
VAT1-203ENST00000587062 GTF2H5Q6ZYL4 71 aa10.09□□□□□ -0.79
VAT1-203ENST00000587062 UBL5Q9BZL1 73 aa10.09□□□□□ -0.79
VAT1-203ENST00000587062 SMCPP49901 116 aaPredicted RBP10.08□□□□□ -0.8
VAT1-203ENST00000587062 WFDC13Q8IUB5 93 aa10.05□□□□□ -0.8
VAT1-203ENST00000587062 FSIP2Q5CZC0 6907 aa10.03□□□□□ -0.8
VAT1-203ENST00000587062 CASC2Q6XLA1 102 aa10.03□□□□□ -0.8
VAT1-203ENST00000587062 KRTAP9-8Q9BYQ0 159 aa10.02□□□□□ -0.81
VAT1-203ENST00000587062 PRO0461Q9UI25 63 aa10.02□□□□□ -0.81
VAT1-203ENST00000587062 F8W1H4 67 aa9.99□□□□□ -0.81
VAT1-203ENST00000587062 LINC00846Q9NV44 126 aa9.98□□□□□ -0.81
VAT1-203ENST00000587062 Q8N9L7 120 aa9.97□□□□□ -0.81
VAT1-203ENST00000587062 HCG22E2RYF7 251 aa9.95□□□□□ -0.82
VAT1-203ENST00000587062 CXCL6P80162 114 aa9.94□□□□□ -0.82
VAT1-203ENST00000587062 C7orf65Q6ZTY9 151 aa9.94□□□□□ -0.82
VAT1-203ENST00000587062 IGKV2D-30A0A075B6S6 120 aa9.93□□□□□ -0.82
VAT1-203ENST00000587062 IGKV2-30P06310 120 aa9.93□□□□□ -0.82
VAT1-203ENST00000587062 MT2AP02795 61 aa9.89□□□□□ -0.83
VAT1-203ENST00000587062 KRTAP10-10P60014 251 aa9.89□□□□□ -0.83
VAT1-203ENST00000587062 H1FX-AS1Q4G0G2 97 aa9.87□□□□□ -0.83
VAT1-203ENST00000587062 Q5W150 140 aa9.87□□□□□ -0.83
VAT1-203ENST00000587062 ETDBQ3ZM63 59 aa9.86□□□□□ -0.83
VAT1-203ENST00000587062 TP53AIP1Q9HCN2 124 aa9.8□□□□□ -0.84
VAT1-203ENST00000587062 MT1FP04733 61 aa9.79□□□□□ -0.84
VAT1-203ENST00000587062 ACYP1P07311 99 aa9.76□□□□□ -0.85
VAT1-203ENST00000587062 C4orf26Q17RF5 130 aa9.72□□□□□ -0.85
VAT1-203ENST00000587062 KRTAP9-3Q9BYQ3 159 aa9.7□□□□□ -0.86
VAT1-203ENST00000587062 A0A1B0GV90 55 aa9.69□□□□□ -0.86
VAT1-203ENST00000587062 FAM240AA0A1B0GVK7 77 aa9.64□□□□□ -0.87
VAT1-203ENST00000587062 ATP5EP2Q5VTU8 51 aa9.63□□□□□ -0.87
VAT1-203ENST00000587062 LCE2BO14633 110 aa9.61□□□□□ -0.87
VAT1-203ENST00000587062 C1orf64Q8NEQ6 169 aa9.59□□□□□ -0.87
VAT1-203ENST00000587062 HIST1H4AP62805 103 aaKnown RBP9.57□□□□□ -0.88
VAT1-203ENST00000587062 TRAV22A0A0B4J277 110 aa9.54□□□□□ -0.88
VAT1-203ENST00000587062 S4R3F8 94 aa9.54□□□□□ -0.88
VAT1-203ENST00000587062 LOC101927531A0A1B0GV80 90 aa9.51□□□□□ -0.89
VAT1-203ENST00000587062 C5orf47Q569G3 176 aa9.51□□□□□ -0.89
VAT1-203ENST00000587062 CSAG1Q6PB30 78 aa9.51□□□□□ -0.89
VAT1-203ENST00000587062 USH2AO75445 5202 aa9.49□□□□□ -0.89
VAT1-203ENST00000587062 CYP4F30PQ9H0H9 118 aa9.49□□□□□ -0.89
VAT1-203ENST00000587062 UQCRQO14949 82 aa9.47□□□□□ -0.89
VAT1-203ENST00000587062 LINC00643Q86TS7 51 aa9.47□□□□□ -0.89
VAT1-203ENST00000587062 KRTAP19-1Q8IUB9 90 aa9.47□□□□□ -0.89
VAT1-203ENST00000587062 KRTAP3-1Q9BYR8 98 aa9.47□□□□□ -0.89
VAT1-203ENST00000587062 ATOX1O00244 68 aa9.46□□□□□ -0.9
VAT1-203ENST00000587062 FAM236AA0A1B0GUQ0 79 aa9.45□□□□□ -0.9
VAT1-203ENST00000587062 FAM236BA0A1B0GV22 79 aa9.45□□□□□ -0.9
VAT1-203ENST00000587062 LCA10Q71F78 164 aa9.41□□□□□ -0.9
VAT1-203ENST00000587062 SSPOA2VEC9 5147 aa9.39□□□□□ -0.91
VAT1-203ENST00000587062 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.39□□□□□ -0.91
VAT1-203ENST00000587062 H0Y9P7 68 aa9.39□□□□□ -0.91
VAT1-203ENST00000587062 J3QR89 54 aa9.38□□□□□ -0.91
VAT1-203ENST00000587062 A0A087WVE0 104 aa9.33□□□□□ -0.92
VAT1-203ENST00000587062 KRTAP19-6Q3LI70 58 aa9.33□□□□□ -0.92
VAT1-203ENST00000587062 MP68P56378 58 aa9.29□□□□□ -0.92
VAT1-203ENST00000587062 KRTAP9-7A8MTY7 169 aa9.28□□□□□ -0.92
VAT1-203ENST00000587062 LINC00208Q96KT6 92 aa9.25□□□□□ -0.93
VAT1-203ENST00000587062 A8MUN3 132 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms