RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 FAM240AA0A1B0GVK7 77 aa7.29□□□□□ -1.24
ATG4D-206ENST00000586863 RBM3P98179 157 aaKnown RBP7.29□□□□□ -1.24
ATG4D-206ENST00000586863 Q75L30 129 aa7.29□□□□□ -1.24
ATG4D-206ENST00000586863 DSCR8Q96T75 97 aa7.28□□□□□ -1.24
ATG4D-206ENST00000586863 ATP11AUNQ6ZP68 121 aa7.26□□□□□ -1.25
ATG4D-206ENST00000586863 C14orf132Q9NPU4 83 aa7.26□□□□□ -1.25
ATG4D-206ENST00000586863 A0A087WSZ3 146 aa7.25□□□□□ -1.25
ATG4D-206ENST00000586863 TRBV7-4A0A0J9YYF1 115 aa7.25□□□□□ -1.25
ATG4D-206ENST00000586863 JMJD7-PLA2G4BH0Y9G9 81 aa7.25□□□□□ -1.25
ATG4D-206ENST00000586863 CCKP06307 115 aa7.25□□□□□ -1.25
ATG4D-206ENST00000586863 A0A1W2PNM2 257 aa7.24□□□□□ -1.25
ATG4D-206ENST00000586863 ACYP1P07311 99 aa7.24□□□□□ -1.25
ATG4D-206ENST00000586863 SIGMAR1Q99720 223 aa7.24□□□□□ -1.25
ATG4D-206ENST00000586863 MT-ATP8P03928 68 aa7.23□□□□□ -1.25
ATG4D-206ENST00000586863 SSPOA2VEC9 5147 aa7.23□□□□□ -1.25
ATG4D-206ENST00000586863 USH2AO75445 5202 aa7.23□□□□□ -1.25
ATG4D-206ENST00000586863 Q96NJ1 140 aa7.21□□□□□ -1.26
ATG4D-206ENST00000586863 C21orf62-AS1Q17RA5 79 aa7.2□□□□□ -1.26
ATG4D-206ENST00000586863 LOC110117498A0A087WWA1 95 aa7.19□□□□□ -1.26
ATG4D-206ENST00000586863 PDE6GP18545 87 aa7.19□□□□□ -1.26
ATG4D-206ENST00000586863 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
ATG4D-206ENST00000586863 Q6ZQT0 140 aa7.18□□□□□ -1.26
ATG4D-206ENST00000586863 A8MUU9 505 aa7.17□□□□□ -1.26
ATG4D-206ENST00000586863 SCGB1A1P11684 91 aa7.16□□□□□ -1.26
ATG4D-206ENST00000586863 LINC00846Q9NV44 126 aa7.16□□□□□ -1.26
ATG4D-206ENST00000586863 LINC00643Q86TS7 51 aa7.14□□□□□ -1.27
ATG4D-206ENST00000586863 KRTAP9-8Q9BYQ0 159 aa7.14□□□□□ -1.27
ATG4D-206ENST00000586863 A0A1B0GW54 56 aa7.13□□□□□ -1.27
ATG4D-206ENST00000586863 IGKV4-1P06312 121 aa7.13□□□□□ -1.27
ATG4D-206ENST00000586863 PCP4P48539 62 aa7.12□□□□□ -1.27
ATG4D-206ENST00000586863 DSCR10P59022 87 aa7.11□□□□□ -1.27
ATG4D-206ENST00000586863 DEFB116Q30KQ4 102 aa7.09□□□□□ -1.27
ATG4D-206ENST00000586863 LINC00472Q9H8W2 130 aa7.09□□□□□ -1.27
ATG4D-206ENST00000586863 J3KT08 172 aa7.07□□□□□ -1.28
ATG4D-206ENST00000586863 KRTAP16-1A8MUX0 517 aa7.06□□□□□ -1.28
ATG4D-206ENST00000586863 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.06□□□□□ -1.28
ATG4D-206ENST00000586863 UBL5Q9BZL1 73 aa7.06□□□□□ -1.28
ATG4D-206ENST00000586863 IMUPQ9GZP8 106 aa7.06□□□□□ -1.28
ATG4D-206ENST00000586863 NREPQ16612 68 aa7.05□□□□□ -1.28
ATG4D-206ENST00000586863 LINC00313P59037 77 aa7.04□□□□□ -1.28
ATG4D-206ENST00000586863 Q6ZVQ6 151 aa7.04□□□□□ -1.28
ATG4D-206ENST00000586863 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
ATG4D-206ENST00000586863 IGHV6-1A0A0B4J1U7 121 aa7.03□□□□□ -1.28
ATG4D-206ENST00000586863 IGKV3D-7A0A0C4DH55 119 aa7.03□□□□□ -1.28
ATG4D-206ENST00000586863 NDUFB1O75438 58 aa7.03□□□□□ -1.28
ATG4D-206ENST00000586863 MT2AP02795 61 aa7.03□□□□□ -1.28
ATG4D-206ENST00000586863 KRTAP9-7A8MTY7 169 aa7.02□□□□□ -1.29
ATG4D-206ENST00000586863 ATP5EP2Q5VTU8 51 aa7.02□□□□□ -1.29
ATG4D-206ENST00000586863 FAM236DA0A1B0GTK5 79 aa7.01□□□□□ -1.29
ATG4D-206ENST00000586863 FAM236CP0DP71 79 aa7.01□□□□□ -1.29
ATG4D-206ENST00000586863 NOTCH2NLQ7Z3S9 236 aa7.01□□□□□ -1.29
ATG4D-206ENST00000586863 A0A1B0GVX0 72 aa7□□□□□ -1.29
ATG4D-206ENST00000586863 C8orf87E5RJ46 101 aa7□□□□□ -1.29
ATG4D-206ENST00000586863 HRES1P13985 223 aa6.99□□□□□ -1.29
ATG4D-206ENST00000586863 MPLKIPQ8TAP9 179 aa6.99□□□□□ -1.29
ATG4D-206ENST00000586863 MT1FP04733 61 aa6.98□□□□□ -1.29
ATG4D-206ENST00000586863 HIST1H4AP62805 103 aaKnown RBP6.98□□□□□ -1.29
ATG4D-206ENST00000586863 FAM236AA0A1B0GUQ0 79 aa6.96□□□□□ -1.3
ATG4D-206ENST00000586863 FAM236BA0A1B0GV22 79 aa6.96□□□□□ -1.3
ATG4D-206ENST00000586863 A8MWP4 228 aa6.96□□□□□ -1.3
ATG4D-206ENST00000586863 A0A087WVE0 104 aa6.95□□□□□ -1.3
ATG4D-206ENST00000586863 LCE2BO14633 110 aa6.95□□□□□ -1.3
ATG4D-206ENST00000586863 CXCL6P80162 114 aa6.95□□□□□ -1.3
ATG4D-206ENST00000586863 BPY2O14599 106 aa6.94□□□□□ -1.3
ATG4D-206ENST00000586863 RBM12B-AS1Q9P1G2 102 aa6.94□□□□□ -1.3
ATG4D-206ENST00000586863 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
ATG4D-206ENST00000586863 ANAPC13Q9BS18 74 aa6.92□□□□□ -1.3
ATG4D-206ENST00000586863 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
ATG4D-206ENST00000586863 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
ATG4D-206ENST00000586863 PRR15Q8IV56 129 aa6.9□□□□□ -1.3
ATG4D-206ENST00000586863 C8orf17Q9NRJ1 99 aa6.9□□□□□ -1.3
ATG4D-206ENST00000586863 K7EQZ3 153 aa6.86□□□□□ -1.31
ATG4D-206ENST00000586863 ATOX1O00244 68 aa6.86□□□□□ -1.31
ATG4D-206ENST00000586863 MACF1Q9UPN3 7388 aaKnown RBP6.84□□□□□ -1.31
ATG4D-206ENST00000586863 Q8N9L7 120 aa6.84□□□□□ -1.31
ATG4D-206ENST00000586863 CCDC179H3BU77 68 aa6.83□□□□□ -1.32
ATG4D-206ENST00000586863 ZCCHC13Q8WW36 166 aaKnown RBP6.83□□□□□ -1.32
ATG4D-206ENST00000586863 MMP24-AS1A0A0U1RRL7 71 aa6.82□□□□□ -1.32
ATG4D-206ENST00000586863 hDV103S1A0JD37 113 aa6.82□□□□□ -1.32
ATG4D-206ENST00000586863 Q8N9P0 234 aaPredicted RBP6.82□□□□□ -1.32
ATG4D-206ENST00000586863 TMEM254Q8TBM7 123 aa6.82□□□□□ -1.32
ATG4D-206ENST00000586863 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
ATG4D-206ENST00000586863 SPINK7P58062 85 aa6.81□□□□□ -1.32
ATG4D-206ENST00000586863 MRPL34Q9BQ48 92 aaKnown RBP6.81□□□□□ -1.32
ATG4D-206ENST00000586863 NDUFS5O43920 106 aa6.79□□□□□ -1.32
ATG4D-206ENST00000586863 COX7CP15954 63 aa6.79□□□□□ -1.32
ATG4D-206ENST00000586863 SMIM20Q8N5G0 67 aa6.78□□□□□ -1.32
ATG4D-206ENST00000586863 SERP2Q8N6R1 65 aa6.78□□□□□ -1.32
ATG4D-206ENST00000586863 CASC2Q6XLA1 102 aa6.77□□□□□ -1.33
ATG4D-206ENST00000586863 WFDC13Q8IUB5 93 aa6.77□□□□□ -1.33
ATG4D-206ENST00000586863 UQCRQO14949 82 aa6.76□□□□□ -1.33
ATG4D-206ENST00000586863 TRAV7A0A075B6U4 112 aa6.73□□□□□ -1.33
ATG4D-206ENST00000586863 HCG22E2RYF7 251 aa6.73□□□□□ -1.33
ATG4D-206ENST00000586863 KRTAP19-6Q3LI70 58 aa6.72□□□□□ -1.33
ATG4D-206ENST00000586863 OCR1Q9BZK8 76 aa6.7□□□□□ -1.34
ATG4D-206ENST00000586863 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
ATG4D-206ENST00000586863 C20orf197Q8N268 126 aa6.62□□□□□ -1.35
ATG4D-206ENST00000586863 TP53AIP1Q9HCN2 124 aa6.62□□□□□ -1.35
ATG4D-206ENST00000586863 IGKV2D-30A0A075B6S6 120 aa6.6□□□□□ -1.35
ATG4D-206ENST00000586863 IGKV2-30P06310 120 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms