RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 LPAP08519 4548 aa9.35□□□□□ -0.91
PRKCSH-203ENST00000586486 J3QR89 54 aa9.34□□□□□ -0.91
PRKCSH-203ENST00000586486 A8MWP4 228 aa9.32□□□□□ -0.92
PRKCSH-203ENST00000586486 BPY2O14599 106 aa9.32□□□□□ -0.92
PRKCSH-203ENST00000586486 A0A1B0GVX0 72 aa9.31□□□□□ -0.92
PRKCSH-203ENST00000586486 C9orf92A6NGG3 77 aa9.31□□□□□ -0.92
PRKCSH-203ENST00000586486 NDUFB1O75438 58 aa9.31□□□□□ -0.92
PRKCSH-203ENST00000586486 DSCR10P59022 87 aa9.31□□□□□ -0.92
PRKCSH-203ENST00000586486 CDIP1Q9H305 208 aa9.31□□□□□ -0.92
PRKCSH-203ENST00000586486 LRP2P98164 4655 aa9.29□□□□□ -0.92
PRKCSH-203ENST00000586486 IGKV3D-7A0A0C4DH55 119 aa9.28□□□□□ -0.92
PRKCSH-203ENST00000586486 IGHV6-1A0A0B4J1U7 121 aa9.27□□□□□ -0.92
PRKCSH-203ENST00000586486 XP32Q5T750 250 aa9.27□□□□□ -0.93
PRKCSH-203ENST00000586486 PRR15Q8IV56 129 aa9.27□□□□□ -0.93
PRKCSH-203ENST00000586486 C8orf87E5RJ46 101 aa9.26□□□□□ -0.93
PRKCSH-203ENST00000586486 LINC00313P59037 77 aa9.25□□□□□ -0.93
PRKCSH-203ENST00000586486 CXCL6P80162 114 aa9.25□□□□□ -0.93
PRKCSH-203ENST00000586486 K7EQZ3 153 aa9.24□□□□□ -0.93
PRKCSH-203ENST00000586486 K7ERU9 68 aa9.24□□□□□ -0.93
PRKCSH-203ENST00000586486 LORP23490 312 aaPredicted RBP9.24□□□□□ -0.93
PRKCSH-203ENST00000586486 NOTCH2NLQ7Z3S9 236 aa9.23□□□□□ -0.93
PRKCSH-203ENST00000586486 ATP5EP2Q5VTU8 51 aa9.22□□□□□ -0.93
PRKCSH-203ENST00000586486 LINC00643Q86TS7 51 aa9.2□□□□□ -0.94
PRKCSH-203ENST00000586486 C8orf17Q9NRJ1 99 aa9.2□□□□□ -0.94
PRKCSH-203ENST00000586486 KRTAP16-1A8MUX0 517 aa9.2□□□□□ -0.94
PRKCSH-203ENST00000586486 Q8N9L7 120 aa9.2□□□□□ -0.94
PRKCSH-203ENST00000586486 MMP24-AS1A0A0U1RRL7 71 aa9.16□□□□□ -0.94
PRKCSH-203ENST00000586486 C20orf166-AS1Q96NR2 134 aa9.16□□□□□ -0.94
PRKCSH-203ENST00000586486 Q75L30 129 aa9.16□□□□□ -0.94
PRKCSH-203ENST00000586486 RPL37P61927 97 aaKnown RBP9.15□□□□□ -0.94
PRKCSH-203ENST00000586486 A8MUU9 505 aa9.14□□□□□ -0.95
PRKCSH-203ENST00000586486 hDV103S1A0JD37 113 aa9.11□□□□□ -0.95
PRKCSH-203ENST00000586486 TMEM254Q8TBM7 123 aa9.11□□□□□ -0.95
PRKCSH-203ENST00000586486 SEC61BP60468 96 aaKnown RBP9.1□□□□□ -0.95
PRKCSH-203ENST00000586486 Q8N9P0 234 aaPredicted RBP9.09□□□□□ -0.95
PRKCSH-203ENST00000586486 UBR4Q5T4S7 5183 aa9.09□□□□□ -0.95
PRKCSH-203ENST00000586486 HCG22E2RYF7 251 aa9.09□□□□□ -0.95
PRKCSH-203ENST00000586486 MUC17Q685J3 4493 aa9.08□□□□□ -0.96
PRKCSH-203ENST00000586486 CASC2Q6XLA1 102 aa9.08□□□□□ -0.96
PRKCSH-203ENST00000586486 MRPL34Q9BQ48 92 aaKnown RBP9.08□□□□□ -0.96
PRKCSH-203ENST00000586486 WFDC13Q8IUB5 93 aa9.06□□□□□ -0.96
PRKCSH-203ENST00000586486 HIST1H4AP62805 103 aaKnown RBP9.05□□□□□ -0.96
PRKCSH-203ENST00000586486 PCOTHQ58A44 107 aa9.03□□□□□ -0.96
PRKCSH-203ENST00000586486 ATP11AUNQ6ZP68 121 aa9.03□□□□□ -0.96
PRKCSH-203ENST00000586486 A0A087WVE0 104 aa8.98□□□□□ -0.97
PRKCSH-203ENST00000586486 MT-ATP8P03928 68 aa8.97□□□□□ -0.97
PRKCSH-203ENST00000586486 IMUPQ9GZP8 106 aa8.97□□□□□ -0.97
PRKCSH-203ENST00000586486 NDUFS5O43920 106 aa8.96□□□□□ -0.98
PRKCSH-203ENST00000586486 ZCCHC13Q8WW36 166 aaKnown RBP8.95□□□□□ -0.98
PRKCSH-203ENST00000586486 KRTAP4-1Q9BYQ7 146 aa8.91□□□□□ -0.98
PRKCSH-203ENST00000586486 RNF213Q63HN8 5207 aa8.9□□□□□ -0.99
PRKCSH-203ENST00000586486 TP53AIP1Q9HCN2 124 aa8.89□□□□□ -0.99
PRKCSH-203ENST00000586486 MUC2Q02817 5179 aa8.86□□□□□ -0.99
PRKCSH-203ENST00000586486 Q5W150 140 aa8.85□□□□□ -0.99
PRKCSH-203ENST00000586486 UQCRQO14949 82 aa8.78□□□□□ -1
PRKCSH-203ENST00000586486 OCR1Q9BZK8 76 aa8.78□□□□□ -1
PRKCSH-203ENST00000586486 FAM236AA0A1B0GUQ0 79 aa8.77□□□□□ -1.01
PRKCSH-203ENST00000586486 FAM236BA0A1B0GV22 79 aa8.77□□□□□ -1.01
PRKCSH-203ENST00000586486 SPINK7P58062 85 aa8.76□□□□□ -1.01
PRKCSH-203ENST00000586486 TRAV22A0A0B4J277 110 aa8.76□□□□□ -1.01
PRKCSH-203ENST00000586486 SCGB1A1P11684 91 aa8.76□□□□□ -1.01
PRKCSH-203ENST00000586486 C7orf65Q6ZTY9 151 aa8.72□□□□□ -1.01
PRKCSH-203ENST00000586486 IGKV2D-30A0A075B6S6 120 aa8.7□□□□□ -1.02
PRKCSH-203ENST00000586486 IGKV2-30P06310 120 aa8.7□□□□□ -1.02
PRKCSH-203ENST00000586486 HRES1P13985 223 aa8.7□□□□□ -1.02
PRKCSH-203ENST00000586486 ATOX1O00244 68 aa8.69□□□□□ -1.02
PRKCSH-203ENST00000586486 SMIM20Q8N5G0 67 aa8.69□□□□□ -1.02
PRKCSH-203ENST00000586486 A0A0U1RQV1 116 aa8.68□□□□□ -1.02
PRKCSH-203ENST00000586486 H0Y9P7 68 aa8.68□□□□□ -1.02
PRKCSH-203ENST00000586486 MPLKIPQ8TAP9 179 aa8.67□□□□□ -1.02
PRKCSH-203ENST00000586486 KRTAP19-2Q3LHN2 52 aa8.66□□□□□ -1.02
PRKCSH-203ENST00000586486 LOC101927531A0A1B0GV80 90 aa8.65□□□□□ -1.02
PRKCSH-203ENST00000586486 C5orf47Q569G3 176 aa8.65□□□□□ -1.02
PRKCSH-203ENST00000586486 TRAV7A0A075B6U4 112 aa8.64□□□□□ -1.03
PRKCSH-203ENST00000586486 MP68P56378 58 aa8.63□□□□□ -1.03
PRKCSH-203ENST00000586486 CYP4F30PQ9H0H9 118 aa8.61□□□□□ -1.03
PRKCSH-203ENST00000586486 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
PRKCSH-203ENST00000586486 H3BPC8 53 aa8.6□□□□□ -1.03
PRKCSH-203ENST00000586486 C1orf64Q8NEQ6 169 aa8.59□□□□□ -1.03
PRKCSH-203ENST00000586486 LINC00208Q96KT6 92 aa8.58□□□□□ -1.04
PRKCSH-203ENST00000586486 FAT4Q6V0I7 4981 aa8.58□□□□□ -1.04
PRKCSH-203ENST00000586486 H3BS24 57 aa8.58□□□□□ -1.04
PRKCSH-203ENST00000586486 COX6B2Q6YFQ2 88 aa8.57□□□□□ -1.04
PRKCSH-203ENST00000586486 SERP2Q8N6R1 65 aa8.54□□□□□ -1.04
PRKCSH-203ENST00000586486 FAM236DA0A1B0GTK5 79 aa8.53□□□□□ -1.04
PRKCSH-203ENST00000586486 FAM236CP0DP71 79 aa8.53□□□□□ -1.04
PRKCSH-203ENST00000586486 C4orf26Q17RF5 130 aa8.5□□□□□ -1.05
PRKCSH-203ENST00000586486 KLKP1Q107X0 134 aa8.46□□□□□ -1.06
PRKCSH-203ENST00000586486 MT1HP80294 61 aa8.44□□□□□ -1.06
PRKCSH-203ENST00000586486 COX7CP15954 63 aa8.43□□□□□ -1.06
PRKCSH-203ENST00000586486 FLGP20930 4061 aaPredicted RBP8.42□□□□□ -1.06
PRKCSH-203ENST00000586486 C20orf197Q8N268 126 aa8.41□□□□□ -1.06
PRKCSH-203ENST00000586486 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.06
PRKCSH-203ENST00000586486 KRTAP3-1Q9BYR8 98 aa8.4□□□□□ -1.06
PRKCSH-203ENST00000586486 ANAPC13Q9BS18 74 aa8.4□□□□□ -1.07
PRKCSH-203ENST00000586486 SNURFQ9Y675 71 aa8.38□□□□□ -1.07
PRKCSH-203ENST00000586486 A8MUN3 132 aa8.32□□□□□ -1.08
PRKCSH-203ENST00000586486 M0R2T5 61 aa8.29□□□□□ -1.08
PRKCSH-203ENST00000586486 DMAC1Q96GE9 116 aa8.26□□□□□ -1.09
PRKCSH-203ENST00000586486 NDUFC1O43677 76 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms