RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 COL5A1-AS1Q5SY13 56 aa4.47□□□□□ -1.69
SMAD4-204ENST00000586253 C1orf195Q5TG92 126 aa4.47□□□□□ -1.69
SMAD4-204ENST00000586253 ANKRD29Q8N6D5 301 aa4.47□□□□□ -1.69
SMAD4-204ENST00000586253 SS18L2Q9UHA2 77 aa4.47□□□□□ -1.69
SMAD4-204ENST00000586253 RBM3P98179 157 aaKnown RBP4.46□□□□□ -1.7
SMAD4-204ENST00000586253 TRBV7-4A0A0J9YYF1 115 aa4.45□□□□□ -1.7
SMAD4-204ENST00000586253 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
SMAD4-204ENST00000586253 A0A1W2PNM2 257 aa4.44□□□□□ -1.7
SMAD4-204ENST00000586253 JMJD7-PLA2G4BH0Y9G9 81 aa4.44□□□□□ -1.7
SMAD4-204ENST00000586253 DSCR8Q96T75 97 aa4.44□□□□□ -1.7
SMAD4-204ENST00000586253 A0A087WSZ3 146 aa4.43□□□□□ -1.7
SMAD4-204ENST00000586253 A0A1B0GV72 72 aa4.43□□□□□ -1.7
SMAD4-204ENST00000586253 C9JAW5 83 aa4.43□□□□□ -1.7
SMAD4-204ENST00000586253 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-204ENST00000586253 UBR4Q5T4S7 5183 aa4.43□□□□□ -1.7
SMAD4-204ENST00000586253 H3BT86 120 aa4.42□□□□□ -1.7
SMAD4-204ENST00000586253 CCKP06307 115 aa4.42□□□□□ -1.7
SMAD4-204ENST00000586253 LOC110117498A0A087WWA1 95 aa4.41□□□□□ -1.7
SMAD4-204ENST00000586253 PDE6GP18545 87 aa4.41□□□□□ -1.7
SMAD4-204ENST00000586253 OBSCN-AS1Q96MR7 158 aa4.41□□□□□ -1.7
SMAD4-204ENST00000586253 SPCS1Q9Y6A9 102 aa4.41□□□□□ -1.7
SMAD4-204ENST00000586253 A0A1B0GW54 56 aa4.4□□□□□ -1.71
SMAD4-204ENST00000586253 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-204ENST00000586253 Q6ZQT0 140 aa4.39□□□□□ -1.71
SMAD4-204ENST00000586253 Q96NJ1 140 aa4.39□□□□□ -1.71
SMAD4-204ENST00000586253 C9orf92A6NGG3 77 aa4.38□□□□□ -1.71
SMAD4-204ENST00000586253 K7EP34 96 aa4.38□□□□□ -1.71
SMAD4-204ENST00000586253 IGKV2-30P06310 120 aa4.38□□□□□ -1.71
SMAD4-204ENST00000586253 VPS25Q9BRG1 176 aa4.38□□□□□ -1.71
SMAD4-204ENST00000586253 C14orf132Q9NPU4 83 aa4.37□□□□□ -1.71
SMAD4-204ENST00000586253 GTF2H5Q6ZYL4 71 aa4.36□□□□□ -1.71
SMAD4-204ENST00000586253 MTURNQ8N3F0 131 aa4.36□□□□□ -1.71
SMAD4-204ENST00000586253 LINC00472Q9H8W2 130 aa4.36□□□□□ -1.71
SMAD4-204ENST00000586253 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
SMAD4-204ENST00000586253 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
SMAD4-204ENST00000586253 PRO0461Q9UI25 63 aa4.35□□□□□ -1.71
SMAD4-204ENST00000586253 IGKV4-1P06312 121 aa4.34□□□□□ -1.71
SMAD4-204ENST00000586253 KRTAP10-6P60371 365 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-204ENST00000586253 SIGMAR1Q99720 223 aa4.34□□□□□ -1.71
SMAD4-204ENST00000586253 J3KT08 172 aa4.33□□□□□ -1.72
SMAD4-204ENST00000586253 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
SMAD4-204ENST00000586253 F8W1H4 67 aa4.31□□□□□ -1.72
SMAD4-204ENST00000586253 MUC2Q02817 5179 aa4.3□□□□□ -1.72
SMAD4-204ENST00000586253 LINC00313P59037 77 aa4.3□□□□□ -1.72
SMAD4-204ENST00000586253 DEFB116Q30KQ4 102 aa4.3□□□□□ -1.72
SMAD4-204ENST00000586253 A0A0U1RQV1 116 aa4.29□□□□□ -1.72
SMAD4-204ENST00000586253 A0A1B0GVX0 72 aa4.29□□□□□ -1.72
SMAD4-204ENST00000586253 NREPQ16612 68 aa4.29□□□□□ -1.72
SMAD4-204ENST00000586253 PCOTHQ58A44 107 aa4.29□□□□□ -1.72
SMAD4-204ENST00000586253 C20orf166-AS1Q96NR2 134 aa4.29□□□□□ -1.72
SMAD4-204ENST00000586253 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
SMAD4-204ENST00000586253 C8orf87E5RJ46 101 aa4.28□□□□□ -1.72
SMAD4-204ENST00000586253 NDUFB1O75438 58 aa4.28□□□□□ -1.72
SMAD4-204ENST00000586253 DSCR10P59022 87 aa4.28□□□□□ -1.72
SMAD4-204ENST00000586253 IGHV6-1A0A0B4J1U7 121 aa4.27□□□□□ -1.73
SMAD4-204ENST00000586253 A8MUU9 505 aa4.27□□□□□ -1.73
SMAD4-204ENST00000586253 A8MWP4 228 aa4.27□□□□□ -1.73
SMAD4-204ENST00000586253 Q6ZVQ6 151 aa4.27□□□□□ -1.73
SMAD4-204ENST00000586253 A0A1B0GV90 55 aa4.26□□□□□ -1.73
SMAD4-204ENST00000586253 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
SMAD4-204ENST00000586253 KRTAP4-1Q9BYQ7 146 aa4.26□□□□□ -1.73
SMAD4-204ENST00000586253 ETDBQ3ZM63 59 aa4.25□□□□□ -1.73
SMAD4-204ENST00000586253 ATP11AUNQ6ZP68 121 aa4.25□□□□□ -1.73
SMAD4-204ENST00000586253 NOTCH2NLQ7Z3S9 236 aa4.25□□□□□ -1.73
SMAD4-204ENST00000586253 IGKV3D-7A0A0C4DH55 119 aa4.24□□□□□ -1.73
SMAD4-204ENST00000586253 PRR15Q8IV56 129 aa4.24□□□□□ -1.73
SMAD4-204ENST00000586253 BPY2O14599 106 aa4.23□□□□□ -1.73
SMAD4-204ENST00000586253 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
SMAD4-204ENST00000586253 UBL5Q9BZL1 73 aa4.22□□□□□ -1.73
SMAD4-204ENST00000586253 C8orf17Q9NRJ1 99 aa4.22□□□□□ -1.73
SMAD4-204ENST00000586253 LINC00846Q9NV44 126 aa4.22□□□□□ -1.73
SMAD4-204ENST00000586253 K7EQZ3 153 aa4.2□□□□□ -1.74
SMAD4-204ENST00000586253 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
SMAD4-204ENST00000586253 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
SMAD4-204ENST00000586253 FAM240AA0A1B0GVK7 77 aa4.18□□□□□ -1.74
SMAD4-204ENST00000586253 ACYP1P07311 99 aa4.18□□□□□ -1.74
SMAD4-204ENST00000586253 SCGB1A1P11684 91 aa4.18□□□□□ -1.74
SMAD4-204ENST00000586253 TMEM254Q8TBM7 123 aa4.18□□□□□ -1.74
SMAD4-204ENST00000586253 hDV103S1A0JD37 113 aa4.16□□□□□ -1.74
SMAD4-204ENST00000586253 CXCL6P80162 114 aa4.16□□□□□ -1.74
SMAD4-204ENST00000586253 KRTAP19-2Q3LHN2 52 aa4.16□□□□□ -1.74
SMAD4-204ENST00000586253 MRPL34Q9BQ48 92 aaKnown RBP4.16□□□□□ -1.74
SMAD4-204ENST00000586253 K7ERU9 68 aa4.15□□□□□ -1.75
SMAD4-204ENST00000586253 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
SMAD4-204ENST00000586253 Q8N9L7 120 aa4.15□□□□□ -1.75
SMAD4-204ENST00000586253 ZCCHC13Q8WW36 166 aaKnown RBP4.15□□□□□ -1.75
SMAD4-204ENST00000586253 CASC2Q6XLA1 102 aa4.13□□□□□ -1.75
SMAD4-204ENST00000586253 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
SMAD4-204ENST00000586253 HCG22E2RYF7 251 aa4.12□□□□□ -1.75
SMAD4-204ENST00000586253 ATP5EP2Q5VTU8 51 aa4.12□□□□□ -1.75
SMAD4-204ENST00000586253 NDUFS5O43920 106 aa4.11□□□□□ -1.75
SMAD4-204ENST00000586253 WFDC13Q8IUB5 93 aa4.11□□□□□ -1.75
SMAD4-204ENST00000586253 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
SMAD4-204ENST00000586253 J3QR89 54 aa4.09□□□□□ -1.75
SMAD4-204ENST00000586253 SPINK7P58062 85 aa4.09□□□□□ -1.75
SMAD4-204ENST00000586253 HRES1P13985 223 aa4.08□□□□□ -1.76
SMAD4-204ENST00000586253 MT1HP80294 61 aa4.08□□□□□ -1.76
SMAD4-204ENST00000586253 LINC00643Q86TS7 51 aa4.08□□□□□ -1.76
SMAD4-204ENST00000586253 FLGP20930 4061 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-204ENST00000586253 RBM12B-AS1Q9P1G2 102 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms