RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 J3KT08 172 aa11.48□□□□□ -0.57
RETREG3-202ENST00000585726 NREPQ16612 68 aa11.48□□□□□ -0.57
RETREG3-202ENST00000585726 Q75L30 129 aa11.45□□□□□ -0.58
RETREG3-202ENST00000585726 NOTCH2NLQ7Z3S9 236 aa11.45□□□□□ -0.58
RETREG3-202ENST00000585726 A0A1B0GVX0 72 aa11.44□□□□□ -0.58
RETREG3-202ENST00000585726 A0A0U1RQV1 116 aa11.43□□□□□ -0.58
RETREG3-202ENST00000585726 F8W1H4 67 aa11.43□□□□□ -0.58
RETREG3-202ENST00000585726 ATP11AUNQ6ZP68 121 aa11.41□□□□□ -0.58
RETREG3-202ENST00000585726 NDUFB1O75438 58 aa11.4□□□□□ -0.58
RETREG3-202ENST00000585726 C20orf166-AS1Q96NR2 134 aa11.4□□□□□ -0.58
RETREG3-202ENST00000585726 A8MUU9 505 aa11.38□□□□□ -0.59
RETREG3-202ENST00000585726 KRTAP16-1A8MUX0 517 aa11.37□□□□□ -0.59
RETREG3-202ENST00000585726 A8MWP4 228 aa11.37□□□□□ -0.59
RETREG3-202ENST00000585726 C8orf87E5RJ46 101 aa11.37□□□□□ -0.59
RETREG3-202ENST00000585726 ETDBQ3ZM63 59 aa11.36□□□□□ -0.59
RETREG3-202ENST00000585726 IGKV3D-7A0A0C4DH55 119 aa11.34□□□□□ -0.59
RETREG3-202ENST00000585726 Q6ZVQ6 151 aa11.32□□□□□ -0.6
RETREG3-202ENST00000585726 BPY2O14599 106 aa11.29□□□□□ -0.6
RETREG3-202ENST00000585726 C8orf17Q9NRJ1 99 aa11.29□□□□□ -0.6
RETREG3-202ENST00000585726 PRR15Q8IV56 129 aa11.28□□□□□ -0.6
RETREG3-202ENST00000585726 LINC00846Q9NV44 126 aa11.28□□□□□ -0.6
RETREG3-202ENST00000585726 A0A1B0GV90 55 aa11.27□□□□□ -0.61
RETREG3-202ENST00000585726 FAT4Q6V0I7 4981 aa11.25□□□□□ -0.61
RETREG3-202ENST00000585726 K7EQZ3 153 aa11.24□□□□□ -0.61
RETREG3-202ENST00000585726 UBL5Q9BZL1 73 aa11.24□□□□□ -0.61
RETREG3-202ENST00000585726 Q8N9L7 120 aa11.19□□□□□ -0.62
RETREG3-202ENST00000585726 MMP24-AS1A0A0U1RRL7 71 aa11.18□□□□□ -0.62
RETREG3-202ENST00000585726 Q8N9P0 234 aaPredicted RBP11.15□□□□□ -0.62
RETREG3-202ENST00000585726 hDV103S1A0JD37 113 aa11.12□□□□□ -0.63
RETREG3-202ENST00000585726 KRTAP19-2Q3LHN2 52 aa11.12□□□□□ -0.63
RETREG3-202ENST00000585726 TMEM254Q8TBM7 123 aa11.12□□□□□ -0.63
RETREG3-202ENST00000585726 MRPL34Q9BQ48 92 aaKnown RBP11.12□□□□□ -0.63
RETREG3-202ENST00000585726 ZCCHC13Q8WW36 166 aaKnown RBP11.11□□□□□ -0.63
RETREG3-202ENST00000585726 LCE2AQ5TA79 106 aaPredicted RBP11.1□□□□□ -0.63
RETREG3-202ENST00000585726 LCE2CQ5TA81 110 aa11.1□□□□□ -0.63
RETREG3-202ENST00000585726 WFDC13Q8IUB5 93 aa11.09□□□□□ -0.63
RETREG3-202ENST00000585726 COX6B2Q6YFQ2 88 aa11.08□□□□□ -0.64
RETREG3-202ENST00000585726 NDUFS5O43920 106 aa11.07□□□□□ -0.64
RETREG3-202ENST00000585726 CASC2Q6XLA1 102 aa11.05□□□□□ -0.64
RETREG3-202ENST00000585726 ACYP1P07311 99 aa11.04□□□□□ -0.64
RETREG3-202ENST00000585726 CXCL6P80162 114 aa11□□□□□ -0.65
RETREG3-202ENST00000585726 FAM240AA0A1B0GVK7 77 aa10.99□□□□□ -0.65
RETREG3-202ENST00000585726 HCG22E2RYF7 251 aa10.98□□□□□ -0.65
RETREG3-202ENST00000585726 MT1HP80294 61 aa10.96□□□□□ -0.65
RETREG3-202ENST00000585726 SPINK7P58062 85 aa10.95□□□□□ -0.66
RETREG3-202ENST00000585726 HRES1P13985 223 aa10.92□□□□□ -0.66
RETREG3-202ENST00000585726 FAM236DA0A1B0GTK5 79 aa10.89□□□□□ -0.67
RETREG3-202ENST00000585726 FAM236CP0DP71 79 aa10.89□□□□□ -0.67
RETREG3-202ENST00000585726 RBM12B-AS1Q9P1G2 102 aa10.88□□□□□ -0.67
RETREG3-202ENST00000585726 Q5W150 140 aa10.87□□□□□ -0.67
RETREG3-202ENST00000585726 M0R2T5 61 aa10.86□□□□□ -0.67
RETREG3-202ENST00000585726 ATP5EP2Q5VTU8 51 aa10.85□□□□□ -0.67
RETREG3-202ENST00000585726 MPLKIPQ8TAP9 179 aa10.83□□□□□ -0.68
RETREG3-202ENST00000585726 HIST1H4AP62805 103 aaKnown RBP10.82□□□□□ -0.68
RETREG3-202ENST00000585726 J3QR89 54 aa10.81□□□□□ -0.68
RETREG3-202ENST00000585726 LINC00643Q86TS7 51 aa10.81□□□□□ -0.68
RETREG3-202ENST00000585726 IGKV2D-30A0A075B6S6 120 aa10.79□□□□□ -0.68
RETREG3-202ENST00000585726 IGKV2-30P06310 120 aa10.79□□□□□ -0.68
RETREG3-202ENST00000585726 FLGP20930 4061 aaPredicted RBP10.77□□□□□ -0.69
RETREG3-202ENST00000585726 C7orf65Q6ZTY9 151 aa10.73□□□□□ -0.69
RETREG3-202ENST00000585726 TP53AIP1Q9HCN2 124 aa10.73□□□□□ -0.69
RETREG3-202ENST00000585726 A0A087WVE0 104 aa10.7□□□□□ -0.7
RETREG3-202ENST00000585726 KRTAP10-6P60371 365 aaPredicted RBP10.69□□□□□ -0.7
RETREG3-202ENST00000585726 LORP23490 312 aaPredicted RBP10.64□□□□□ -0.71
RETREG3-202ENST00000585726 K7ERU9 68 aa10.56□□□□□ -0.72
RETREG3-202ENST00000585726 C4orf26Q17RF5 130 aa10.56□□□□□ -0.72
RETREG3-202ENST00000585726 TRAV22A0A0B4J277 110 aa10.55□□□□□ -0.72
RETREG3-202ENST00000585726 UQCRQO14949 82 aa10.53□□□□□ -0.72
RETREG3-202ENST00000585726 KRTAP9-2Q9BYQ4 174 aa10.53□□□□□ -0.72
RETREG3-202ENST00000585726 H1FX-AS1Q4G0G2 97 aa10.5□□□□□ -0.73
RETREG3-202ENST00000585726 H0Y9P7 68 aa10.48□□□□□ -0.73
RETREG3-202ENST00000585726 CYP4F30PQ9H0H9 118 aa10.46□□□□□ -0.73
RETREG3-202ENST00000585726 LOC101927531A0A1B0GV80 90 aa10.45□□□□□ -0.74
RETREG3-202ENST00000585726 MT-ATP8P03928 68 aa10.44□□□□□ -0.74
RETREG3-202ENST00000585726 ATOX1O00244 68 aa10.41□□□□□ -0.74
RETREG3-202ENST00000585726 SCGB1A1P11684 91 aa10.41□□□□□ -0.74
RETREG3-202ENST00000585726 C1orf64Q8NEQ6 169 aa10.41□□□□□ -0.74
RETREG3-202ENST00000585726 KRTAP9-8Q9BYQ0 159 aa10.41□□□□□ -0.74
RETREG3-202ENST00000585726 OCR1Q9BZK8 76 aa10.41□□□□□ -0.74
RETREG3-202ENST00000585726 LCE2DQ5TA82 110 aaPredicted RBP10.4□□□□□ -0.74
RETREG3-202ENST00000585726 KRTAP3-1Q9BYR8 98 aa10.37□□□□□ -0.75
RETREG3-202ENST00000585726 IMUPQ9GZP8 106 aa10.36□□□□□ -0.75
RETREG3-202ENST00000585726 LINC00208Q96KT6 92 aa10.35□□□□□ -0.75
RETREG3-202ENST00000585726 MP68P56378 58 aa10.34□□□□□ -0.75
RETREG3-202ENST00000585726 MT2AP02795 61 aa10.32□□□□□ -0.76
RETREG3-202ENST00000585726 C5orf47Q569G3 176 aa10.3□□□□□ -0.76
RETREG3-202ENST00000585726 S4R3F8 94 aa10.26□□□□□ -0.77
RETREG3-202ENST00000585726 FAM236AA0A1B0GUQ0 79 aa10.25□□□□□ -0.77
RETREG3-202ENST00000585726 FAM236BA0A1B0GV22 79 aa10.25□□□□□ -0.77
RETREG3-202ENST00000585726 MT1FP04733 61 aa10.25□□□□□ -0.77
RETREG3-202ENST00000585726 KRTAP10-10P60014 251 aa10.25□□□□□ -0.77
RETREG3-202ENST00000585726 KLKP1Q107X0 134 aa10.24□□□□□ -0.77
RETREG3-202ENST00000585726 LCA10Q71F78 164 aa10.19□□□□□ -0.78
RETREG3-202ENST00000585726 H3BPC8 53 aa10.18□□□□□ -0.78
RETREG3-202ENST00000585726 SMIM20Q8N5G0 67 aa10.14□□□□□ -0.79
RETREG3-202ENST00000585726 TRAV7A0A075B6U4 112 aa10.13□□□□□ -0.79
RETREG3-202ENST00000585726 CSAG1Q6PB30 78 aa10.11□□□□□ -0.79
RETREG3-202ENST00000585726 FSIP2Q5CZC0 6907 aa10.1□□□□□ -0.79
RETREG3-202ENST00000585726 KRTAP9-3Q9BYQ3 159 aa10.07□□□□□ -0.8
RETREG3-202ENST00000585726 A8MUN3 132 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms