RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 PRO0461Q9UI25 63 aa12.58□□□□□ -0.4
LSM7-202ENST00000585395 F8W1H4 67 aa12.57□□□□□ -0.4
LSM7-202ENST00000585395 SMCPP49901 116 aaPredicted RBP12.57□□□□□ -0.4
LSM7-202ENST00000585395 NREPQ16612 68 aa12.51□□□□□ -0.41
LSM7-202ENST00000585395 DEFB116Q30KQ4 102 aa12.51□□□□□ -0.41
LSM7-202ENST00000585395 NDUFB1O75438 58 aa12.48□□□□□ -0.41
LSM7-202ENST00000585395 RPL37P61927 97 aaKnown RBP12.47□□□□□ -0.41
LSM7-202ENST00000585395 PCOTHQ58A44 107 aa12.47□□□□□ -0.41
LSM7-202ENST00000585395 LINC00313P59037 77 aa12.46□□□□□ -0.41
LSM7-202ENST00000585395 C8orf87E5RJ46 101 aa12.44□□□□□ -0.42
LSM7-202ENST00000585395 IGHV6-1A0A0B4J1U7 121 aa12.43□□□□□ -0.42
LSM7-202ENST00000585395 A0A1B0GVX0 72 aa12.43□□□□□ -0.42
LSM7-202ENST00000585395 KRTAP4-1Q9BYQ7 146 aa12.43□□□□□ -0.42
LSM7-202ENST00000585395 DSCR10P59022 87 aa12.42□□□□□ -0.42
LSM7-202ENST00000585395 Q75L30 129 aa12.41□□□□□ -0.42
LSM7-202ENST00000585395 ETDBQ3ZM63 59 aa12.39□□□□□ -0.43
LSM7-202ENST00000585395 A8MWP4 228 aa12.38□□□□□ -0.43
LSM7-202ENST00000585395 ATP11AUNQ6ZP68 121 aa12.37□□□□□ -0.43
LSM7-202ENST00000585395 C20orf166-AS1Q96NR2 134 aa12.35□□□□□ -0.43
LSM7-202ENST00000585395 UBL5Q9BZL1 73 aa12.34□□□□□ -0.43
LSM7-202ENST00000585395 BPY2O14599 106 aa12.33□□□□□ -0.44
LSM7-202ENST00000585395 A8MUU9 505 aa12.32□□□□□ -0.44
LSM7-202ENST00000585395 Q6ZVQ6 151 aa12.31□□□□□ -0.44
LSM7-202ENST00000585395 A0A1B0GV90 55 aa12.28□□□□□ -0.44
LSM7-202ENST00000585395 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.45
LSM7-202ENST00000585395 PRR15Q8IV56 129 aa12.27□□□□□ -0.45
LSM7-202ENST00000585395 KRTAP16-1A8MUX0 517 aa12.26□□□□□ -0.45
LSM7-202ENST00000585395 NOTCH2NLQ7Z3S9 236 aa12.26□□□□□ -0.45
LSM7-202ENST00000585395 C8orf17Q9NRJ1 99 aa12.25□□□□□ -0.45
LSM7-202ENST00000585395 LINC00846Q9NV44 126 aa12.25□□□□□ -0.45
LSM7-202ENST00000585395 ACYP1P07311 99 aa12.2□□□□□ -0.46
LSM7-202ENST00000585395 LCE2CQ5TA81 110 aa12.2□□□□□ -0.46
LSM7-202ENST00000585395 K7EQZ3 153 aa12.17□□□□□ -0.46
LSM7-202ENST00000585395 FAM240AA0A1B0GVK7 77 aa12.13□□□□□ -0.47
LSM7-202ENST00000585395 TMEM254Q8TBM7 123 aa12.13□□□□□ -0.47
LSM7-202ENST00000585395 COX6B2Q6YFQ2 88 aa12.12□□□□□ -0.47
LSM7-202ENST00000585395 MMP24-AS1A0A0U1RRL7 71 aa12.11□□□□□ -0.47
LSM7-202ENST00000585395 MT1HP80294 61 aa12.11□□□□□ -0.47
LSM7-202ENST00000585395 Q8N9P0 234 aaPredicted RBP12.11□□□□□ -0.47
LSM7-202ENST00000585395 hDV103S1A0JD37 113 aa12.1□□□□□ -0.47
LSM7-202ENST00000585395 MRPL34Q9BQ48 92 aaKnown RBP12.1□□□□□ -0.47
LSM7-202ENST00000585395 CXCL6P80162 114 aa12.08□□□□□ -0.48
LSM7-202ENST00000585395 KRTAP19-2Q3LHN2 52 aa12.07□□□□□ -0.48
LSM7-202ENST00000585395 LORP23490 312 aaPredicted RBP12.05□□□□□ -0.48
LSM7-202ENST00000585395 Q8N9L7 120 aa12.05□□□□□ -0.48
LSM7-202ENST00000585395 ZCCHC13Q8WW36 166 aaKnown RBP12.04□□□□□ -0.48
LSM7-202ENST00000585395 CASC2Q6XLA1 102 aa12.03□□□□□ -0.48
LSM7-202ENST00000585395 KRTAP9-7A8MTY7 169 aa12.02□□□□□ -0.49
LSM7-202ENST00000585395 J3QR89 54 aa12.02□□□□□ -0.49
LSM7-202ENST00000585395 NDUFS5O43920 106 aa12.01□□□□□ -0.49
LSM7-202ENST00000585395 WFDC13Q8IUB5 93 aa12□□□□□ -0.49
LSM7-202ENST00000585395 KRTAP10-6P60371 365 aaPredicted RBP11.99□□□□□ -0.49
LSM7-202ENST00000585395 ATP5EP2Q5VTU8 51 aa11.99□□□□□ -0.49
LSM7-202ENST00000585395 HCG22E2RYF7 251 aa11.97□□□□□ -0.49
LSM7-202ENST00000585395 M0R2T5 61 aa11.95□□□□□ -0.5
LSM7-202ENST00000585395 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.93□□□□□ -0.5
LSM7-202ENST00000585395 LINC00643Q86TS7 51 aa11.89□□□□□ -0.51
LSM7-202ENST00000585395 SPINK7P58062 85 aa11.83□□□□□ -0.52
LSM7-202ENST00000585395 RBM12B-AS1Q9P1G2 102 aa11.83□□□□□ -0.52
LSM7-202ENST00000585395 HIST1H4AP62805 103 aaKnown RBP11.81□□□□□ -0.52
LSM7-202ENST00000585395 TP53AIP1Q9HCN2 124 aa11.79□□□□□ -0.52
LSM7-202ENST00000585395 FAM236DA0A1B0GTK5 79 aa11.76□□□□□ -0.53
LSM7-202ENST00000585395 FAM236CP0DP71 79 aa11.76□□□□□ -0.53
LSM7-202ENST00000585395 HRES1P13985 223 aa11.74□□□□□ -0.53
LSM7-202ENST00000585395 K7ERU9 68 aa11.72□□□□□ -0.53
LSM7-202ENST00000585395 Q5W150 140 aa11.7□□□□□ -0.54
LSM7-202ENST00000585395 C7orf65Q6ZTY9 151 aa11.7□□□□□ -0.54
LSM7-202ENST00000585395 FLGP20930 4061 aaPredicted RBP11.69□□□□□ -0.54
LSM7-202ENST00000585395 MPLKIPQ8TAP9 179 aa11.68□□□□□ -0.54
LSM7-202ENST00000585395 IGKV2D-30A0A075B6S6 120 aa11.67□□□□□ -0.54
LSM7-202ENST00000585395 IGKV2-30P06310 120 aa11.67□□□□□ -0.54
LSM7-202ENST00000585395 SSPOA2VEC9 5147 aa11.62□□□□□ -0.55
LSM7-202ENST00000585395 USH2AO75445 5202 aa11.61□□□□□ -0.55
LSM7-202ENST00000585395 A0A087WVE0 104 aa11.59□□□□□ -0.55
LSM7-202ENST00000585395 UQCRQO14949 82 aa11.55□□□□□ -0.56
LSM7-202ENST00000585395 TRAV22A0A0B4J277 110 aa11.54□□□□□ -0.56
LSM7-202ENST00000585395 FCGBPQ9Y6R7 5405 aaPredicted RBP11.5□□□□□ -0.57
LSM7-202ENST00000585395 IMUPQ9GZP8 106 aa11.49□□□□□ -0.57
LSM7-202ENST00000585395 ATOX1O00244 68 aa11.48□□□□□ -0.57
LSM7-202ENST00000585395 LOC101927531A0A1B0GV80 90 aa11.46□□□□□ -0.57
LSM7-202ENST00000585395 SCGB1A1P11684 91 aa11.43□□□□□ -0.58
LSM7-202ENST00000585395 H0Y9P7 68 aa11.42□□□□□ -0.58
LSM7-202ENST00000585395 H1FX-AS1Q4G0G2 97 aa11.39□□□□□ -0.59
LSM7-202ENST00000585395 C4orf26Q17RF5 130 aa11.38□□□□□ -0.59
LSM7-202ENST00000585395 MT-ATP8P03928 68 aa11.37□□□□□ -0.59
LSM7-202ENST00000585395 MP68P56378 58 aa11.37□□□□□ -0.59
LSM7-202ENST00000585395 CYP4F30PQ9H0H9 118 aa11.37□□□□□ -0.59
LSM7-202ENST00000585395 OCR1Q9BZK8 76 aa11.36□□□□□ -0.59
LSM7-202ENST00000585395 KRTAP9-8Q9BYQ0 159 aa11.34□□□□□ -0.59
LSM7-202ENST00000585395 SYNE2Q8WXH0 6885 aaKnown RBP11.34□□□□□ -0.59
LSM7-202ENST00000585395 C5orf47Q569G3 176 aa11.33□□□□□ -0.6
LSM7-202ENST00000585395 C1orf64Q8NEQ6 169 aa11.3□□□□□ -0.6
LSM7-202ENST00000585395 KRTAP19-1Q8IUB9 90 aa11.28□□□□□ -0.6
LSM7-202ENST00000585395 MACF1Q9UPN3 7388 aaKnown RBP11.28□□□□□ -0.6
LSM7-202ENST00000585395 SMIM20Q8N5G0 67 aa11.27□□□□□ -0.61
LSM7-202ENST00000585395 LINC00208Q96KT6 92 aa11.27□□□□□ -0.61
LSM7-202ENST00000585395 H3BPC8 53 aa11.26□□□□□ -0.61
LSM7-202ENST00000585395 FAM236AA0A1B0GUQ0 79 aa11.23□□□□□ -0.61
LSM7-202ENST00000585395 FAM236BA0A1B0GV22 79 aa11.23□□□□□ -0.61
LSM7-202ENST00000585395 MT2AP02795 61 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms