RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 LINC00208Q96KT6 92 aa8.98□□□□□ -0.97
CDK5RAP3-236ENST00000584991 TP53AIP1Q9HCN2 124 aa8.98□□□□□ -0.97
CDK5RAP3-236ENST00000584991 SMR3BP02814 79 aaPredicted RBP8.97□□□□□ -0.97
CDK5RAP3-236ENST00000584991 MOBPQ13875 183 aa8.96□□□□□ -0.98
CDK5RAP3-236ENST00000584991 ASB16-AS1Q495Z4 193 aa8.96□□□□□ -0.98
CDK5RAP3-236ENST00000584991 VPS13BQ7Z7G8 4022 aa8.95□□□□□ -0.98
CDK5RAP3-236ENST00000584991 MMP24-AS1A0A0U1RRL7 71 aa8.95□□□□□ -0.98
CDK5RAP3-236ENST00000584991 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-236ENST00000584991 MPLKIPQ8TAP9 179 aa8.94□□□□□ -0.98
CDK5RAP3-236ENST00000584991 V9GYY9 64 aa8.94□□□□□ -0.98
CDK5RAP3-236ENST00000584991 Q96NJ1 140 aa8.93□□□□□ -0.98
CDK5RAP3-236ENST00000584991 IGLV9-49A0A0B4J1Y8 123 aa8.89□□□□□ -0.99
CDK5RAP3-236ENST00000584991 C8orf17Q9NRJ1 99 aa8.87□□□□□ -0.99
CDK5RAP3-236ENST00000584991 ANAPC11Q9NYG5 84 aa8.87□□□□□ -0.99
CDK5RAP3-236ENST00000584991 A0A1B0GVX0 72 aa8.86□□□□□ -0.99
CDK5RAP3-236ENST00000584991 CDK2AP2O75956 126 aa8.86□□□□□ -0.99
CDK5RAP3-236ENST00000584991 FAT1Q14517 4588 aa8.85□□□□□ -0.99
CDK5RAP3-236ENST00000584991 IGLV7-46A0A075B6I9 117 aa8.84□□□□□ -0.99
CDK5RAP3-236ENST00000584991 C1orf195Q5TG92 126 aa8.84□□□□□ -0.99
CDK5RAP3-236ENST00000584991 EPPK1P58107 5090 aaKnown RBP8.84□□□□□ -0.99
CDK5RAP3-236ENST00000584991 KRTAP10-4P60372 401 aaPredicted RBP8.83□□□□□ -1
CDK5RAP3-236ENST00000584991 CD164Q04900 197 aa8.83□□□□□ -1
CDK5RAP3-236ENST00000584991 BRK1Q8WUW1 75 aa8.83□□□□□ -1
CDK5RAP3-236ENST00000584991 HSPG2P98160 4391 aa8.82□□□□□ -1
CDK5RAP3-236ENST00000584991 PRR4Q16378 134 aa8.81□□□□□ -1
CDK5RAP3-236ENST00000584991 SPINK6Q6UWN8 80 aa8.81□□□□□ -1
CDK5RAP3-236ENST00000584991 MRPL34Q9BQ48 92 aaKnown RBP8.8□□□□□ -1
CDK5RAP3-236ENST00000584991 FAM229AH3BQW9 127 aa8.79□□□□□ -1
CDK5RAP3-236ENST00000584991 RYR1P21817 5038 aa8.79□□□□□ -1
CDK5RAP3-236ENST00000584991 LIMD2Q9BT23 127 aa8.79□□□□□ -1
CDK5RAP3-236ENST00000584991 PLA2G1BP04054 148 aaKnown RBP8.77□□□□□ -1.01
CDK5RAP3-236ENST00000584991 KRTAP1-4P0C5Y4 121 aa8.77□□□□□ -1.01
CDK5RAP3-236ENST00000584991 SSBP3-AS1Q7Z2R9 100 aa8.77□□□□□ -1.01
CDK5RAP3-236ENST00000584991 IGHV6-1A0A0B4J1U7 121 aa8.77□□□□□ -1.01
CDK5RAP3-236ENST00000584991 Q5VSD8 79 aa8.75□□□□□ -1.01
CDK5RAP3-236ENST00000584991 A0A087X002 238 aa8.74□□□□□ -1.01
CDK5RAP3-236ENST00000584991 Q8N9P0 234 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-236ENST00000584991 KRTAP17-1Q9BYP8 105 aa8.72□□□□□ -1.01
CDK5RAP3-236ENST00000584991 KIAA1109Q2LD37 5005 aa8.72□□□□□ -1.01
CDK5RAP3-236ENST00000584991 NDUFS5O43920 106 aa8.71□□□□□ -1.01
CDK5RAP3-236ENST00000584991 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.01
CDK5RAP3-236ENST00000584991 C8orf87E5RJ46 101 aa8.7□□□□□ -1.02
CDK5RAP3-236ENST00000584991 PKHD1L1Q86WI1 4243 aa8.7□□□□□ -1.02
CDK5RAP3-236ENST00000584991 LOC101927531A0A1B0GV80 90 aa8.7□□□□□ -1.02
CDK5RAP3-236ENST00000584991 COA5Q86WW8 74 aa8.7□□□□□ -1.02
CDK5RAP3-236ENST00000584991 PSPHP1O15172 72 aa8.69□□□□□ -1.02
CDK5RAP3-236ENST00000584991 Q8N1X5 172 aa8.67□□□□□ -1.02
CDK5RAP3-236ENST00000584991 A8MUN3 132 aa8.66□□□□□ -1.02
CDK5RAP3-236ENST00000584991 PCOTHQ58A44 107 aa8.65□□□□□ -1.02
CDK5RAP3-236ENST00000584991 Q5VV11 94 aa8.65□□□□□ -1.02
CDK5RAP3-236ENST00000584991 PRR26Q8N8Z3 221 aa8.65□□□□□ -1.02
CDK5RAP3-236ENST00000584991 TYMSOSQ8TAI1 123 aa8.64□□□□□ -1.03
CDK5RAP3-236ENST00000584991 KRTAP13-3Q3SY46 172 aa8.62□□□□□ -1.03
CDK5RAP3-236ENST00000584991 NOTCH2NLQ7Z3S9 236 aa8.62□□□□□ -1.03
CDK5RAP3-236ENST00000584991 Q75L30 129 aa8.6□□□□□ -1.03
CDK5RAP3-236ENST00000584991 LINC01558Q9Y6Z2 57 aa8.59□□□□□ -1.03
CDK5RAP3-236ENST00000584991 PRR15LQ9BU68 103 aa8.57□□□□□ -1.04
CDK5RAP3-236ENST00000584991 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
CDK5RAP3-236ENST00000584991 HRES1P13985 223 aa8.56□□□□□ -1.04
CDK5RAP3-236ENST00000584991 LINC00313P59037 77 aa8.56□□□□□ -1.04
CDK5RAP3-236ENST00000584991 BIRC6Q9NR09 4857 aa8.55□□□□□ -1.04
CDK5RAP3-236ENST00000584991 C4orf48Q5BLP8 95 aa8.54□□□□□ -1.04
CDK5RAP3-236ENST00000584991 Q5W150 140 aa8.54□□□□□ -1.04
CDK5RAP3-236ENST00000584991 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
CDK5RAP3-236ENST00000584991 ACYP2P14621 99 aa8.52□□□□□ -1.05
CDK5RAP3-236ENST00000584991 KRTAP4-5Q9BYR2 181 aa8.52□□□□□ -1.05
CDK5RAP3-236ENST00000584991 LRP1Q07954 4544 aaKnown RBP8.51□□□□□ -1.05
CDK5RAP3-236ENST00000584991 SPINK1P00995 79 aa8.49□□□□□ -1.05
CDK5RAP3-236ENST00000584991 FLG2Q5D862 2391 aaPredicted RBP8.49□□□□□ -1.05
CDK5RAP3-236ENST00000584991 FAT3Q8TDW7 4589 aa8.48□□□□□ -1.05
CDK5RAP3-236ENST00000584991 SPAG11AQ6PDA7 123 aa8.48□□□□□ -1.05
CDK5RAP3-236ENST00000584991 KRTAP10-8P60410 259 aa8.47□□□□□ -1.05
CDK5RAP3-236ENST00000584991 TNXBP22105 4242 aa8.47□□□□□ -1.05
CDK5RAP3-236ENST00000584991 ATP11AUNQ6ZP68 121 aa8.47□□□□□ -1.05
CDK5RAP3-236ENST00000584991 DMAC1Q96GE9 116 aa8.46□□□□□ -1.06
CDK5RAP3-236ENST00000584991 A6NED7 52 aa8.45□□□□□ -1.06
CDK5RAP3-236ENST00000584991 PMAIP1Q13794 54 aa8.45□□□□□ -1.06
CDK5RAP3-236ENST00000584991 CDC42SE1Q9NRR8 79 aa8.45□□□□□ -1.06
CDK5RAP3-236ENST00000584991 IGKV2-30P06310 120 aa8.44□□□□□ -1.06
CDK5RAP3-236ENST00000584991 KRTAP16-1A8MUX0 517 aa8.43□□□□□ -1.06
CDK5RAP3-236ENST00000584991 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-236ENST00000584991 HERC2O95714 4834 aa8.41□□□□□ -1.06
CDK5RAP3-236ENST00000584991 MYCBP2O75592 4640 aa8.41□□□□□ -1.06
CDK5RAP3-236ENST00000584991 LCA10Q71F78 164 aa8.4□□□□□ -1.06
CDK5RAP3-236ENST00000584991 MT1HL1P0DM35 61 aa8.39□□□□□ -1.07
CDK5RAP3-236ENST00000584991 ABCA13Q86UQ4 5058 aa8.33□□□□□ -1.08
CDK5RAP3-236ENST00000584991 A8MU10 97 aa8.33□□□□□ -1.08
CDK5RAP3-236ENST00000584991 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
CDK5RAP3-236ENST00000584991 DMBT1Q9UGM3 2413 aaPredicted RBP8.31□□□□□ -1.08
CDK5RAP3-236ENST00000584991 SPTSSBQ8NFR3 76 aa8.29□□□□□ -1.08
CDK5RAP3-236ENST00000584991 SPINK7P58062 85 aa8.28□□□□□ -1.08
CDK5RAP3-236ENST00000584991 A6NN06 94 aa8.26□□□□□ -1.09
CDK5RAP3-236ENST00000584991 KTN1-AS1Q86SY8 53 aa8.26□□□□□ -1.09
CDK5RAP3-236ENST00000584991 IGKV2D-30A0A075B6S6 120 aa8.23□□□□□ -1.09
CDK5RAP3-236ENST00000584991 A0A1B0GU69 56 aa8.23□□□□□ -1.09
CDK5RAP3-236ENST00000584991 J3QL48 77 aa8.21□□□□□ -1.09
CDK5RAP3-236ENST00000584991 C7orf65Q6ZTY9 151 aa8.21□□□□□ -1.1
CDK5RAP3-236ENST00000584991 SEC61GP60059 68 aa8.17□□□□□ -1.1
CDK5RAP3-236ENST00000584991 SPATA8Q6RVD6 105 aa8.16□□□□□ -1.1
CDK5RAP3-236ENST00000584991 C9orf92A6NGG3 77 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms