RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SOSTDC1Q6X4U4 206 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 ZNF625Q96I27 306 aaPredicted RBP1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 TRBV20-1A0A075B6N2 111 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 TRAV13-1A0A0B4J241 112 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 DEFB4AO15263 64 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 SPINK1P00995 79 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 CRYGAP11844 174 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 S100A7L2Q5SY68 101 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 C7orf65Q6ZTY9 151 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 BRK1Q8WUW1 75 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 NAA38Q9BRA0 125 aaKnown RBP1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 VAMP8Q9BV40 100 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 IGKV2-29A2NJV5 120 aaPredicted RBP1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 BAALC-AS2P0C853 105 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 UQCR10Q9UDW1 63 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 A0A1B0GU33 70 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 JMJD7-PLA2G4BH0Y9G9 81 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 LINC00158P58513 81 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 Q5VSD8 79 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 DPH3Q96FX2 82 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 C14orf132Q9NPU4 83 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 NACAE9PAV3 2078 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 SRRM2Q9UQ35 2752 aaKnown RBP1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 SPRR5A0A1B0GTR4 108 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 H3BMG7 143 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 C3orf79P0CE67 100 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 COX8AP10176 69 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 COX7BP24311 80 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 LINC01600Q96MT4 127 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 PRO1933Q9H354 126 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 TEX49A0A1B0GTD5 131 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 DEFB1P60022 68 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 LCE3CQ5T5A8 94 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 RAB37Q96AX2 223 aa1.1□□□□□ -2.23
SMCHD1-211ENST00000584897 TRAV23DV6A0A075B6W5 121 aa1.09□□□□□ -2.23
SMCHD1-211ENST00000584897 K7ERJ3 54 aa1.09□□□□□ -2.23
SMCHD1-211ENST00000584897 TRACP01848 142 aa1.09□□□□□ -2.23
SMCHD1-211ENST00000584897 C6orf48Q9UBA6 75 aa1.09□□□□□ -2.23
SMCHD1-211ENST00000584897 CDKN2A-AS1Q9UH64 79 aa1.09□□□□□ -2.23
SMCHD1-211ENST00000584897 SNURFQ9Y675 71 aa1.09□□□□□ -2.23
SMCHD1-211ENST00000584897 FUSP35637 526 aaKnown RBP eCLIP1.09□□□□□ -2.24
SMCHD1-211ENST00000584897 HRCT1Q6UXD1 115 aa1.09□□□□□ -2.24
SMCHD1-211ENST00000584897 C20orf166-AS1Q96NR2 134 aa1.09□□□□□ -2.24
SMCHD1-211ENST00000584897 RETNLBQ9BQ08 111 aa1.09□□□□□ -2.24
SMCHD1-211ENST00000584897 C22orf24Q9Y442 160 aa1.09□□□□□ -2.24
SMCHD1-211ENST00000584897 IGLV5-48A0A075B6I7 105 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 DNAL4O96015 105 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 ELOF1P60002 83 aaKnown RBP1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 C9orf116Q5BN46 136 aaPredicted RBP1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 Q6ZRX8 168 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 C5orf38Q86SI9 138 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 LINC00308Q8TCZ7 52 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 TOMM7Q9P0U1 55 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 ACYP1P07311 99 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 MOBPQ13875 183 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 KRTAP4-3Q9BYR4 195 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 LOC105371267A0A1B0GV96 52 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 A0A1W2PNN7 141 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 RPL39P62891 51 aaKnown RBP1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 LINC00304Q8N9R0 145 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 DSCR8Q96T75 97 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 DMBT1Q9UGM3 2413 aaPredicted RBP1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 A0A096LNI7 61 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 C9JAW5 83 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 KRTAP6-3Q3LI67 103 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 PRO1854Q9UHT4 67 aa1.08□□□□□ -2.24
SMCHD1-211ENST00000584897 hDV103S1A0JD37 113 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 F8W1H4 67 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 SPINK8P0C7L1 97 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 SMIM13P0DJ93 91 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 KRTAP10-1P60331 282 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 COX6A2Q02221 97 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 ATXN8Q156A1 80 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 C1orf137Q5JT78 98 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 ATP5EP2Q5VTU8 51 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 CASC2Q6XLA1 102 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 KRTAP13-1Q8IUC0 172 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 SPRR4Q96PI1 79 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 A0A1W2PNM2 257 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 hADV29S1A0JD25 119 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 KRTAP20-1Q3LI63 56 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 UNQ6190/PRO20217Q6UXQ8 127 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 CLEC2BQ92478 149 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 ORMDL1Q9P0S3 153 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 TRBV7-4A0A0J9YYF1 115 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 Q6ZQT0 140 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 GTF2H5Q6ZYL4 71 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 KRTAP5-2Q701N4 177 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 WFDC13Q8IUB5 93 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 Q9BRP9 147 aa1.07□□□□□ -2.24
SMCHD1-211ENST00000584897 IGKV3OR2-268A0A0C4DH90 116 aa1.06□□□□□ -2.24
SMCHD1-211ENST00000584897 NDUFB1O75438 58 aa1.06□□□□□ -2.24
SMCHD1-211ENST00000584897 ERC2-IT1O76042 136 aa1.06□□□□□ -2.24
SMCHD1-211ENST00000584897 KRTAP10-8P60410 259 aa1.06□□□□□ -2.24
SMCHD1-211ENST00000584897 RPS28P62857 69 aaKnown RBP1.06□□□□□ -2.24
SMCHD1-211ENST00000584897 TPRXLQ17RH7 258 aa1.06□□□□□ -2.24
SMCHD1-211ENST00000584897 STAB2Q8WWQ8 2551 aa1.06□□□□□ -2.24
SMCHD1-211ENST00000584897 TRBV7-7A0A0K0K1E9 115 aa1.06□□□□□ -2.24
SMCHD1-211ENST00000584897 SPATA45Q537H7 98 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms