RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 TEN1Q86WV5 123 aa5.46□□□□□ -1.54
GGA3-219ENST00000584550 FCGBPQ9Y6R7 5405 aaPredicted RBP5.45□□□□□ -1.54
GGA3-219ENST00000584550 A0A087WSZ3 146 aa5.45□□□□□ -1.54
GGA3-219ENST00000584550 Q6Q795 121 aa5.45□□□□□ -1.54
GGA3-219ENST00000584550 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
GGA3-219ENST00000584550 A0A1W2PNM2 257 aa5.44□□□□□ -1.54
GGA3-219ENST00000584550 SS18L2Q9UHA2 77 aa5.44□□□□□ -1.54
GGA3-219ENST00000584550 SMCPP49901 116 aaPredicted RBP5.43□□□□□ -1.54
GGA3-219ENST00000584550 CCKP06307 115 aa5.42□□□□□ -1.54
GGA3-219ENST00000584550 RBM3P98179 157 aaKnown RBP5.42□□□□□ -1.54
GGA3-219ENST00000584550 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
GGA3-219ENST00000584550 DSCR8Q96T75 97 aa5.41□□□□□ -1.54
GGA3-219ENST00000584550 TRBV7-4A0A0J9YYF1 115 aa5.39□□□□□ -1.55
GGA3-219ENST00000584550 C9JAW5 83 aa5.39□□□□□ -1.55
GGA3-219ENST00000584550 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
GGA3-219ENST00000584550 OBSCN-AS1Q96MR7 158 aa5.38□□□□□ -1.55
GGA3-219ENST00000584550 H3BT86 120 aa5.37□□□□□ -1.55
GGA3-219ENST00000584550 Q96NJ1 140 aa5.37□□□□□ -1.55
GGA3-219ENST00000584550 DEFB116Q30KQ4 102 aa5.36□□□□□ -1.55
GGA3-219ENST00000584550 FAM240AA0A1B0GVK7 77 aa5.35□□□□□ -1.55
GGA3-219ENST00000584550 JMJD7-PLA2G4BH0Y9G9 81 aa5.35□□□□□ -1.55
GGA3-219ENST00000584550 MT-ATP8P03928 68 aa5.35□□□□□ -1.55
GGA3-219ENST00000584550 IGKV4-1P06312 121 aa5.35□□□□□ -1.55
GGA3-219ENST00000584550 KRTAP9-8Q9BYQ0 159 aa5.35□□□□□ -1.55
GGA3-219ENST00000584550 RPL37P61927 97 aaKnown RBP5.34□□□□□ -1.55
GGA3-219ENST00000584550 C14orf132Q9NPU4 83 aa5.34□□□□□ -1.55
GGA3-219ENST00000584550 DSCR10P59022 87 aa5.32□□□□□ -1.56
GGA3-219ENST00000584550 Q6ZQT0 140 aa5.32□□□□□ -1.56
GGA3-219ENST00000584550 ANAPC13Q9BS18 74 aa5.32□□□□□ -1.56
GGA3-219ENST00000584550 LOC110117498A0A087WWA1 95 aa5.31□□□□□ -1.56
GGA3-219ENST00000584550 ACYP1P07311 99 aa5.31□□□□□ -1.56
GGA3-219ENST00000584550 LINC00472Q9H8W2 130 aa5.31□□□□□ -1.56
GGA3-219ENST00000584550 PDE6GP18545 87 aa5.3□□□□□ -1.56
GGA3-219ENST00000584550 IGHV6-1A0A0B4J1U7 121 aa5.29□□□□□ -1.56
GGA3-219ENST00000584550 LCE2BO14633 110 aa5.29□□□□□ -1.56
GGA3-219ENST00000584550 LINC00313P59037 77 aa5.29□□□□□ -1.56
GGA3-219ENST00000584550 ATP11AUNQ6ZP68 121 aa5.28□□□□□ -1.56
GGA3-219ENST00000584550 Q75L30 129 aa5.28□□□□□ -1.56
GGA3-219ENST00000584550 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
GGA3-219ENST00000584550 IMUPQ9GZP8 106 aa5.28□□□□□ -1.56
GGA3-219ENST00000584550 NOTCH2NLQ7Z3S9 236 aa5.27□□□□□ -1.57
GGA3-219ENST00000584550 J3KT08 172 aa5.25□□□□□ -1.57
GGA3-219ENST00000584550 C20orf166-AS1Q96NR2 134 aa5.25□□□□□ -1.57
GGA3-219ENST00000584550 A0A1B0GVX0 72 aa5.24□□□□□ -1.57
GGA3-219ENST00000584550 A0A1B0GW54 56 aa5.24□□□□□ -1.57
GGA3-219ENST00000584550 A8MUU9 505 aa5.24□□□□□ -1.57
GGA3-219ENST00000584550 MT2AP02795 61 aa5.24□□□□□ -1.57
GGA3-219ENST00000584550 NREPQ16612 68 aa5.24□□□□□ -1.57
GGA3-219ENST00000584550 KRTAP16-1A8MUX0 517 aa5.22□□□□□ -1.57
GGA3-219ENST00000584550 NDUFB1O75438 58 aa5.22□□□□□ -1.57
GGA3-219ENST00000584550 LINC00643Q86TS7 51 aa5.22□□□□□ -1.57
GGA3-219ENST00000584550 C8orf87E5RJ46 101 aa5.21□□□□□ -1.58
GGA3-219ENST00000584550 MT1FP04733 61 aa5.2□□□□□ -1.58
GGA3-219ENST00000584550 A8MWP4 228 aa5.19□□□□□ -1.58
GGA3-219ENST00000584550 KRTAP9-3Q9BYQ3 159 aa5.19□□□□□ -1.58
GGA3-219ENST00000584550 IGKV3D-7A0A0C4DH55 119 aa5.18□□□□□ -1.58
GGA3-219ENST00000584550 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
GGA3-219ENST00000584550 C8orf17Q9NRJ1 99 aa5.17□□□□□ -1.58
GGA3-219ENST00000584550 CCDC179H3BU77 68 aa5.16□□□□□ -1.58
GGA3-219ENST00000584550 KRTAP6-3Q3LI67 103 aa5.16□□□□□ -1.58
GGA3-219ENST00000584550 PRR15Q8IV56 129 aa5.16□□□□□ -1.58
GGA3-219ENST00000584550 LINC00846Q9NV44 126 aa5.16□□□□□ -1.58
GGA3-219ENST00000584550 BPY2O14599 106 aa5.15□□□□□ -1.59
GGA3-219ENST00000584550 Q6ZVQ6 151 aa5.15□□□□□ -1.59
GGA3-219ENST00000584550 FAM236AA0A1B0GUQ0 79 aa5.14□□□□□ -1.59
GGA3-219ENST00000584550 FAM236BA0A1B0GV22 79 aa5.14□□□□□ -1.59
GGA3-219ENST00000584550 UQCRQO14949 82 aa5.14□□□□□ -1.59
GGA3-219ENST00000584550 K7EQZ3 153 aa5.13□□□□□ -1.59
GGA3-219ENST00000584550 ATOX1O00244 68 aa5.13□□□□□ -1.59
GGA3-219ENST00000584550 HIST1H4AP62805 103 aaKnown RBP5.13□□□□□ -1.59
GGA3-219ENST00000584550 KRTAP19-6Q3LI70 58 aa5.12□□□□□ -1.59
GGA3-219ENST00000584550 ATP5EP2Q5VTU8 51 aa5.11□□□□□ -1.59
GGA3-219ENST00000584550 Q8N9L7 120 aa5.11□□□□□ -1.59
GGA3-219ENST00000584550 ZCCHC13Q8WW36 166 aaKnown RBP5.11□□□□□ -1.59
GGA3-219ENST00000584550 UBL5Q9BZL1 73 aa5.11□□□□□ -1.59
GGA3-219ENST00000584550 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
GGA3-219ENST00000584550 COX7CP15954 63 aa5.1□□□□□ -1.59
GGA3-219ENST00000584550 Q8N9P0 234 aaPredicted RBP5.1□□□□□ -1.59
GGA3-219ENST00000584550 hDV103S1A0JD37 113 aa5.09□□□□□ -1.59
GGA3-219ENST00000584550 NDUFS5O43920 106 aa5.09□□□□□ -1.59
GGA3-219ENST00000584550 NEBP20929 6669 aa5.08□□□□□ -1.6
GGA3-219ENST00000584550 WFDC13Q8IUB5 93 aa5.08□□□□□ -1.6
GGA3-219ENST00000584550 TMEM254Q8TBM7 123 aa5.08□□□□□ -1.6
GGA3-219ENST00000584550 MRPL34Q9BQ48 92 aaKnown RBP5.08□□□□□ -1.6
GGA3-219ENST00000584550 FAM236DA0A1B0GTK5 79 aa5.07□□□□□ -1.6
GGA3-219ENST00000584550 FAM236CP0DP71 79 aa5.07□□□□□ -1.6
GGA3-219ENST00000584550 SMIM20Q8N5G0 67 aa5.06□□□□□ -1.6
GGA3-219ENST00000584550 SPINK7P58062 85 aa5.05□□□□□ -1.6
GGA3-219ENST00000584550 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
GGA3-219ENST00000584550 CASC2Q6XLA1 102 aa5.05□□□□□ -1.6
GGA3-219ENST00000584550 SERP2Q8N6R1 65 aa5.05□□□□□ -1.6
GGA3-219ENST00000584550 HRES1P13985 223 aa5.04□□□□□ -1.6
GGA3-219ENST00000584550 TMEM258P61165 79 aa5.04□□□□□ -1.6
GGA3-219ENST00000584550 RBM12B-AS1Q9P1G2 102 aa5.03□□□□□ -1.6
GGA3-219ENST00000584550 HCG22E2RYF7 251 aa5.01□□□□□ -1.61
GGA3-219ENST00000584550 KRTAP20-1Q3LI63 56 aa5.01□□□□□ -1.61
GGA3-219ENST00000584550 MUC12Q9UKN1 5478 aa5□□□□□ -1.61
GGA3-219ENST00000584550 CXCL6P80162 114 aa4.98□□□□□ -1.61
GGA3-219ENST00000584550 Q5W150 140 aa4.98□□□□□ -1.61
GGA3-219ENST00000584550 MPLKIPQ8TAP9 179 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms