RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 NAA38Q9BRA0 125 aaKnown RBP6.94□□□□□ -1.3
CDK5RAP3-233ENST00000584186 C9JAW5 83 aa6.93□□□□□ -1.3
CDK5RAP3-233ENST00000584186 M0R143 59 aa6.92□□□□□ -1.3
CDK5RAP3-233ENST00000584186 FAM236DA0A1B0GTK5 79 aa6.91□□□□□ -1.3
CDK5RAP3-233ENST00000584186 A0A1B0GVX0 72 aa6.91□□□□□ -1.3
CDK5RAP3-233ENST00000584186 FAM236CP0DP71 79 aa6.91□□□□□ -1.3
CDK5RAP3-233ENST00000584186 ATXN8Q156A1 80 aa6.91□□□□□ -1.3
CDK5RAP3-233ENST00000584186 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
CDK5RAP3-233ENST00000584186 Q6ZQT0 140 aa6.88□□□□□ -1.31
CDK5RAP3-233ENST00000584186 J3KT08 172 aa6.87□□□□□ -1.31
CDK5RAP3-233ENST00000584186 C21orf62-AS1Q17RA5 79 aa6.87□□□□□ -1.31
CDK5RAP3-233ENST00000584186 RBM12B-AS1Q9P1G2 102 aa6.87□□□□□ -1.31
CDK5RAP3-233ENST00000584186 JMJD7-PLA2G4BH0Y9G9 81 aa6.85□□□□□ -1.31
CDK5RAP3-233ENST00000584186 NDUFB1O75438 58 aa6.84□□□□□ -1.31
CDK5RAP3-233ENST00000584186 HRES1P13985 223 aa6.84□□□□□ -1.31
CDK5RAP3-233ENST00000584186 SMIM6P0DI80 62 aa6.83□□□□□ -1.32
CDK5RAP3-233ENST00000584186 LOC110117498A0A087WWA1 95 aa6.82□□□□□ -1.32
CDK5RAP3-233ENST00000584186 BATFQ16520 125 aa6.82□□□□□ -1.32
CDK5RAP3-233ENST00000584186 KRTAP9-8Q9BYQ0 159 aa6.82□□□□□ -1.32
CDK5RAP3-233ENST00000584186 C14orf132Q9NPU4 83 aa6.82□□□□□ -1.32
CDK5RAP3-233ENST00000584186 MPLKIPQ8TAP9 179 aa6.81□□□□□ -1.32
CDK5RAP3-233ENST00000584186 ZCCHC13Q8WW36 166 aaKnown RBP6.81□□□□□ -1.32
CDK5RAP3-233ENST00000584186 LYRM7Q5U5X0 104 aa6.8□□□□□ -1.32
CDK5RAP3-233ENST00000584186 A8MWP4 228 aa6.79□□□□□ -1.32
CDK5RAP3-233ENST00000584186 PDE6GP18545 87 aa6.79□□□□□ -1.32
CDK5RAP3-233ENST00000584186 A0A1B0GW54 56 aa6.78□□□□□ -1.32
CDK5RAP3-233ENST00000584186 TSTD3H0UI37 97 aa6.78□□□□□ -1.32
CDK5RAP3-233ENST00000584186 C8orf17Q9NRJ1 99 aa6.78□□□□□ -1.32
CDK5RAP3-233ENST00000584186 IGKV3D-7A0A0C4DH55 119 aa6.77□□□□□ -1.33
CDK5RAP3-233ENST00000584186 SPINK7P58062 85 aa6.77□□□□□ -1.33
CDK5RAP3-233ENST00000584186 MTURNQ8N3F0 131 aa6.76□□□□□ -1.33
CDK5RAP3-233ENST00000584186 Q8N9P0 234 aaPredicted RBP6.76□□□□□ -1.33
CDK5RAP3-233ENST00000584186 NREPQ16612 68 aa6.75□□□□□ -1.33
CDK5RAP3-233ENST00000584186 MT2AP02795 61 aa6.73□□□□□ -1.33
CDK5RAP3-233ENST00000584186 Q6ZVQ6 151 aa6.73□□□□□ -1.33
CDK5RAP3-233ENST00000584186 PRR15Q8IV56 129 aa6.72□□□□□ -1.33
CDK5RAP3-233ENST00000584186 USH2AO75445 5202 aa6.72□□□□□ -1.33
CDK5RAP3-233ENST00000584186 C9orf118A6NHY6 69 aa6.7□□□□□ -1.34
CDK5RAP3-233ENST00000584186 WFDC13Q8IUB5 93 aa6.69□□□□□ -1.34
CDK5RAP3-233ENST00000584186 A0A1W2PPM0 123 aa6.68□□□□□ -1.34
CDK5RAP3-233ENST00000584186 H3BT86 120 aa6.68□□□□□ -1.34
CDK5RAP3-233ENST00000584186 MT1FP04733 61 aa6.68□□□□□ -1.34
CDK5RAP3-233ENST00000584186 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
CDK5RAP3-233ENST00000584186 MMP24-AS1A0A0U1RRL7 71 aa6.67□□□□□ -1.34
CDK5RAP3-233ENST00000584186 TAX1BP3O14907 124 aa6.67□□□□□ -1.34
CDK5RAP3-233ENST00000584186 SSPOA2VEC9 5147 aa6.67□□□□□ -1.34
CDK5RAP3-233ENST00000584186 K7EQZ3 153 aa6.66□□□□□ -1.34
CDK5RAP3-233ENST00000584186 NDUFS5O43920 106 aa6.66□□□□□ -1.34
CDK5RAP3-233ENST00000584186 TMEM254Q8TBM7 123 aa6.66□□□□□ -1.34
CDK5RAP3-233ENST00000584186 MRPL34Q9BQ48 92 aaKnown RBP6.66□□□□□ -1.34
CDK5RAP3-233ENST00000584186 LOC105371267A0A1B0GV96 52 aa6.64□□□□□ -1.35
CDK5RAP3-233ENST00000584186 hDV103S1A0JD37 113 aa6.64□□□□□ -1.35
CDK5RAP3-233ENST00000584186 BPY2O14599 106 aa6.63□□□□□ -1.35
CDK5RAP3-233ENST00000584186 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
CDK5RAP3-233ENST00000584186 SPCS1Q9Y6A9 102 aa6.6□□□□□ -1.35
CDK5RAP3-233ENST00000584186 Q8N9L7 120 aa6.57□□□□□ -1.36
CDK5RAP3-233ENST00000584186 IGKV2D-30A0A075B6S6 120 aa6.56□□□□□ -1.36
CDK5RAP3-233ENST00000584186 IGKV2-30P06310 120 aa6.56□□□□□ -1.36
CDK5RAP3-233ENST00000584186 CASC2Q6XLA1 102 aa6.54□□□□□ -1.36
CDK5RAP3-233ENST00000584186 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
CDK5RAP3-233ENST00000584186 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
CDK5RAP3-233ENST00000584186 H1FX-AS1Q4G0G2 97 aa6.53□□□□□ -1.36
CDK5RAP3-233ENST00000584186 Q5W150 140 aa6.53□□□□□ -1.36
CDK5RAP3-233ENST00000584186 FCGBPQ9Y6R7 5405 aaPredicted RBP6.52□□□□□ -1.37
CDK5RAP3-233ENST00000584186 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
CDK5RAP3-233ENST00000584186 C7orf65Q6ZTY9 151 aa6.51□□□□□ -1.37
CDK5RAP3-233ENST00000584186 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
CDK5RAP3-233ENST00000584186 COL5A1-AS1Q5SY13 56 aa6.5□□□□□ -1.37
CDK5RAP3-233ENST00000584186 UBL5Q9BZL1 73 aa6.48□□□□□ -1.37
CDK5RAP3-233ENST00000584186 LINC00846Q9NV44 126 aa6.48□□□□□ -1.37
CDK5RAP3-233ENST00000584186 KRTAP9-7A8MTY7 169 aa6.46□□□□□ -1.38
CDK5RAP3-233ENST00000584186 K7EP34 96 aa6.46□□□□□ -1.38
CDK5RAP3-233ENST00000584186 PRO0461Q9UI25 63 aa6.46□□□□□ -1.38
CDK5RAP3-233ENST00000584186 CXCL6P80162 114 aa6.45□□□□□ -1.38
CDK5RAP3-233ENST00000584186 C4orf26Q17RF5 130 aa6.45□□□□□ -1.38
CDK5RAP3-233ENST00000584186 GTF2H5Q6ZYL4 71 aa6.38□□□□□ -1.39
CDK5RAP3-233ENST00000584186 MACF1Q9UPN3 7388 aaKnown RBP6.36□□□□□ -1.39
CDK5RAP3-233ENST00000584186 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
CDK5RAP3-233ENST00000584186 C5orf47Q569G3 176 aa6.35□□□□□ -1.39
CDK5RAP3-233ENST00000584186 PCP4L1A6NKN8 68 aa6.34□□□□□ -1.39
CDK5RAP3-233ENST00000584186 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
CDK5RAP3-233ENST00000584186 F8W1H4 67 aa6.33□□□□□ -1.4
CDK5RAP3-233ENST00000584186 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
CDK5RAP3-233ENST00000584186 C1orf64Q8NEQ6 169 aa6.31□□□□□ -1.4
CDK5RAP3-233ENST00000584186 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
CDK5RAP3-233ENST00000584186 TP53AIP1Q9HCN2 124 aa6.31□□□□□ -1.4
CDK5RAP3-233ENST00000584186 S4R3F8 94 aa6.31□□□□□ -1.4
CDK5RAP3-233ENST00000584186 FAM236AA0A1B0GUQ0 79 aa6.29□□□□□ -1.4
CDK5RAP3-233ENST00000584186 FAM236BA0A1B0GV22 79 aa6.29□□□□□ -1.4
CDK5RAP3-233ENST00000584186 CSAG1Q6PB30 78 aa6.26□□□□□ -1.41
CDK5RAP3-233ENST00000584186 LCA10Q71F78 164 aa6.26□□□□□ -1.41
CDK5RAP3-233ENST00000584186 LCE3BQ5TA77 95 aa6.21□□□□□ -1.42
CDK5RAP3-233ENST00000584186 CYP4F30PQ9H0H9 118 aa6.2□□□□□ -1.42
CDK5RAP3-233ENST00000584186 TRAV22A0A0B4J277 110 aa6.18□□□□□ -1.42
CDK5RAP3-233ENST00000584186 ACYP1P07311 99 aa6.18□□□□□ -1.42
CDK5RAP3-233ENST00000584186 KRTAP4-12Q9BQ66 201 aa6.18□□□□□ -1.42
CDK5RAP3-233ENST00000584186 HIST1H4AP62805 103 aaKnown RBP6.17□□□□□ -1.42
CDK5RAP3-233ENST00000584186 LOC101927531A0A1B0GV80 90 aa6.15□□□□□ -1.42
CDK5RAP3-233ENST00000584186 A0A087WVE0 104 aa6.13□□□□□ -1.43
CDK5RAP3-233ENST00000584186 ATP5EP2Q5VTU8 51 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms