RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CDIP1Q9H305 208 aa9.07□□□□□ -0.96
CDK5RAP3-228ENST00000583363 A8MWP4 228 aa9.06□□□□□ -0.96
CDK5RAP3-228ENST00000583363 LINC00643Q86TS7 51 aa9.06□□□□□ -0.96
CDK5RAP3-228ENST00000583363 IGKV3D-7A0A0C4DH55 119 aa9.04□□□□□ -0.96
CDK5RAP3-228ENST00000583363 NDUFB1O75438 58 aa9.04□□□□□ -0.96
CDK5RAP3-228ENST00000583363 CXCL6P80162 114 aa9.04□□□□□ -0.96
CDK5RAP3-228ENST00000583363 A0A1B0GVX0 72 aa9.03□□□□□ -0.96
CDK5RAP3-228ENST00000583363 PRR15Q8IV56 129 aa9.02□□□□□ -0.97
CDK5RAP3-228ENST00000583363 IGHV6-1A0A0B4J1U7 121 aa9.01□□□□□ -0.97
CDK5RAP3-228ENST00000583363 KRTAP13-3Q3SY46 172 aa9.01□□□□□ -0.97
CDK5RAP3-228ENST00000583363 MUC2Q02817 5179 aa9□□□□□ -0.97
CDK5RAP3-228ENST00000583363 K7EQZ3 153 aa9□□□□□ -0.97
CDK5RAP3-228ENST00000583363 ATP5EP2Q5VTU8 51 aa9□□□□□ -0.97
CDK5RAP3-228ENST00000583363 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
CDK5RAP3-228ENST00000583363 LINC00313P59037 77 aa8.98□□□□□ -0.97
CDK5RAP3-228ENST00000583363 NOTCH2NLQ7Z3S9 236 aa8.98□□□□□ -0.97
CDK5RAP3-228ENST00000583363 Q8N9L7 120 aa8.98□□□□□ -0.97
CDK5RAP3-228ENST00000583363 C9orf92A6NGG3 77 aa8.97□□□□□ -0.97
CDK5RAP3-228ENST00000583363 C8orf87E5RJ46 101 aa8.97□□□□□ -0.97
CDK5RAP3-228ENST00000583363 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
CDK5RAP3-228ENST00000583363 KRTAP9-2Q9BYQ4 174 aa8.92□□□□□ -0.98
CDK5RAP3-228ENST00000583363 MMP24-AS1A0A0U1RRL7 71 aa8.91□□□□□ -0.98
CDK5RAP3-228ENST00000583363 KRTAP16-1A8MUX0 517 aa8.9□□□□□ -0.98
CDK5RAP3-228ENST00000583363 MT-ATP8P03928 68 aa8.89□□□□□ -0.99
CDK5RAP3-228ENST00000583363 HIST1H4AP62805 103 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-228ENST00000583363 XP32Q5T750 250 aa8.88□□□□□ -0.99
CDK5RAP3-228ENST00000583363 hDV103S1A0JD37 113 aa8.86□□□□□ -0.99
CDK5RAP3-228ENST00000583363 HCG22E2RYF7 251 aa8.85□□□□□ -0.99
CDK5RAP3-228ENST00000583363 TMEM254Q8TBM7 123 aa8.85□□□□□ -0.99
CDK5RAP3-228ENST00000583363 CASC2Q6XLA1 102 aa8.84□□□□□ -0.99
CDK5RAP3-228ENST00000583363 WFDC13Q8IUB5 93 aa8.84□□□□□ -0.99
CDK5RAP3-228ENST00000583363 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
CDK5RAP3-228ENST00000583363 IMUPQ9GZP8 106 aa8.84□□□□□ -0.99
CDK5RAP3-228ENST00000583363 A0A087WVE0 104 aa8.83□□□□□ -1
CDK5RAP3-228ENST00000583363 A8MUU9 505 aa8.83□□□□□ -1
CDK5RAP3-228ENST00000583363 MRPL34Q9BQ48 92 aaKnown RBP8.83□□□□□ -1
CDK5RAP3-228ENST00000583363 FAT4Q6V0I7 4981 aa8.82□□□□□ -1
CDK5RAP3-228ENST00000583363 A0A0U1RQV1 116 aa8.82□□□□□ -1
CDK5RAP3-228ENST00000583363 Q75L30 129 aa8.81□□□□□ -1
CDK5RAP3-228ENST00000583363 Q8N9P0 234 aaPredicted RBP8.81□□□□□ -1
CDK5RAP3-228ENST00000583363 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
CDK5RAP3-228ENST00000583363 RPL37P61927 97 aaKnown RBP8.79□□□□□ -1
CDK5RAP3-228ENST00000583363 MUC17Q685J3 4493 aa8.76□□□□□ -1.01
CDK5RAP3-228ENST00000583363 KRTAP9-6A0A140TA67 174 aa8.72□□□□□ -1.01
CDK5RAP3-228ENST00000583363 NDUFS5O43920 106 aa8.72□□□□□ -1.01
CDK5RAP3-228ENST00000583363 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
CDK5RAP3-228ENST00000583363 ATP11AUNQ6ZP68 121 aa8.7□□□□□ -1.02
CDK5RAP3-228ENST00000583363 PCOTHQ58A44 107 aa8.68□□□□□ -1.02
CDK5RAP3-228ENST00000583363 SCGB1A1P11684 91 aa8.66□□□□□ -1.02
CDK5RAP3-228ENST00000583363 ZCCHC13Q8WW36 166 aaKnown RBP8.66□□□□□ -1.02
CDK5RAP3-228ENST00000583363 TP53AIP1Q9HCN2 124 aa8.66□□□□□ -1.02
CDK5RAP3-228ENST00000583363 FAM236AA0A1B0GUQ0 79 aa8.65□□□□□ -1.02
CDK5RAP3-228ENST00000583363 FAM236BA0A1B0GV22 79 aa8.65□□□□□ -1.02
CDK5RAP3-228ENST00000583363 Q5W150 140 aa8.63□□□□□ -1.03
CDK5RAP3-228ENST00000583363 OCR1Q9BZK8 76 aa8.61□□□□□ -1.03
CDK5RAP3-228ENST00000583363 UQCRQO14949 82 aa8.6□□□□□ -1.03
CDK5RAP3-228ENST00000583363 ATOX1O00244 68 aa8.56□□□□□ -1.04
CDK5RAP3-228ENST00000583363 KRTAP4-1Q9BYQ7 146 aa8.55□□□□□ -1.04
CDK5RAP3-228ENST00000583363 SMIM20Q8N5G0 67 aa8.54□□□□□ -1.04
CDK5RAP3-228ENST00000583363 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
CDK5RAP3-228ENST00000583363 TRAV22A0A0B4J277 110 aa8.51□□□□□ -1.05
CDK5RAP3-228ENST00000583363 C5orf47Q569G3 176 aa8.5□□□□□ -1.05
CDK5RAP3-228ENST00000583363 SPINK7P58062 85 aa8.49□□□□□ -1.05
CDK5RAP3-228ENST00000583363 H0Y9P7 68 aa8.48□□□□□ -1.05
CDK5RAP3-228ENST00000583363 IGKV2-30P06310 120 aa8.46□□□□□ -1.06
CDK5RAP3-228ENST00000583363 MP68P56378 58 aa8.45□□□□□ -1.06
CDK5RAP3-228ENST00000583363 IGKV2D-30A0A075B6S6 120 aa8.44□□□□□ -1.06
CDK5RAP3-228ENST00000583363 SERP2Q8N6R1 65 aa8.44□□□□□ -1.06
CDK5RAP3-228ENST00000583363 ANAPC13Q9BS18 74 aa8.44□□□□□ -1.06
CDK5RAP3-228ENST00000583363 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
CDK5RAP3-228ENST00000583363 FSIP2Q5CZC0 6907 aa8.43□□□□□ -1.06
CDK5RAP3-228ENST00000583363 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
CDK5RAP3-228ENST00000583363 H3BPC8 53 aa8.41□□□□□ -1.06
CDK5RAP3-228ENST00000583363 LCE2DQ5TA82 110 aaPredicted RBP8.41□□□□□ -1.06
CDK5RAP3-228ENST00000583363 C1orf64Q8NEQ6 169 aa8.41□□□□□ -1.06
CDK5RAP3-228ENST00000583363 LINC00208Q96KT6 92 aa8.41□□□□□ -1.06
CDK5RAP3-228ENST00000583363 CYP4F30PQ9H0H9 118 aa8.41□□□□□ -1.06
CDK5RAP3-228ENST00000583363 HRES1P13985 223 aa8.39□□□□□ -1.07
CDK5RAP3-228ENST00000583363 COX7CP15954 63 aa8.37□□□□□ -1.07
CDK5RAP3-228ENST00000583363 CRCT1Q9UGL9 99 aa8.35□□□□□ -1.07
CDK5RAP3-228ENST00000583363 MPLKIPQ8TAP9 179 aa8.33□□□□□ -1.08
CDK5RAP3-228ENST00000583363 KLKP1Q107X0 134 aa8.3□□□□□ -1.08
CDK5RAP3-228ENST00000583363 PCP4P48539 62 aa8.29□□□□□ -1.08
CDK5RAP3-228ENST00000583363 C20orf197Q8N268 126 aa8.29□□□□□ -1.08
CDK5RAP3-228ENST00000583363 RBM12B-AS1Q9P1G2 102 aa8.28□□□□□ -1.08
CDK5RAP3-228ENST00000583363 SNURFQ9Y675 71 aa8.28□□□□□ -1.08
CDK5RAP3-228ENST00000583363 KRTAP19-2Q3LHN2 52 aa8.27□□□□□ -1.09
CDK5RAP3-228ENST00000583363 CCDC179H3BU77 68 aa8.25□□□□□ -1.09
CDK5RAP3-228ENST00000583363 C4orf26Q17RF5 130 aa8.25□□□□□ -1.09
CDK5RAP3-228ENST00000583363 LCE2CQ5TA81 110 aa8.24□□□□□ -1.09
CDK5RAP3-228ENST00000583363 COX6B2Q6YFQ2 88 aa8.22□□□□□ -1.09
CDK5RAP3-228ENST00000583363 FAM236DA0A1B0GTK5 79 aa8.19□□□□□ -1.1
CDK5RAP3-228ENST00000583363 FAM236CP0DP71 79 aa8.19□□□□□ -1.1
CDK5RAP3-228ENST00000583363 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
CDK5RAP3-228ENST00000583363 FLGP20930 4061 aaPredicted RBP8.18□□□□□ -1.1
CDK5RAP3-228ENST00000583363 MT1HP80294 61 aa8.15□□□□□ -1.1
CDK5RAP3-228ENST00000583363 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
CDK5RAP3-228ENST00000583363 NDUFC1O43677 76 aa8.14□□□□□ -1.11
CDK5RAP3-228ENST00000583363 H1FX-AS1Q4G0G2 97 aa8.12□□□□□ -1.11
CDK5RAP3-228ENST00000583363 H7BZZ5 65 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms