RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CDK2AP2O75956 126 aa8.14□□□□□ -1.11
SRSF1-205ENST00000582730 Q96NJ1 140 aa8.14□□□□□ -1.11
SRSF1-205ENST00000582730 IGHV6-1A0A0B4J1U7 121 aa8.14□□□□□ -1.11
SRSF1-205ENST00000582730 SPINK6Q6UWN8 80 aa8.14□□□□□ -1.11
SRSF1-205ENST00000582730 COA5Q86WW8 74 aa8.14□□□□□ -1.11
SRSF1-205ENST00000582730 SPTSSBQ8NFR3 76 aa8.14□□□□□ -1.11
SRSF1-205ENST00000582730 MMP24-AS1A0A0U1RRL7 71 aa8.13□□□□□ -1.11
SRSF1-205ENST00000582730 LCA10Q71F78 164 aa8.12□□□□□ -1.11
SRSF1-205ENST00000582730 KRTAP10-1P60331 282 aa8.12□□□□□ -1.11
SRSF1-205ENST00000582730 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
SRSF1-205ENST00000582730 CD164Q04900 197 aa8.12□□□□□ -1.11
SRSF1-205ENST00000582730 A6NED7 52 aa8.1□□□□□ -1.11
SRSF1-205ENST00000582730 Q75L30 129 aa8.1□□□□□ -1.11
SRSF1-205ENST00000582730 IGLV7-46A0A075B6I9 117 aa8.1□□□□□ -1.11
SRSF1-205ENST00000582730 NDUFS5O43920 106 aa8.09□□□□□ -1.11
SRSF1-205ENST00000582730 LOC101927531A0A1B0GV80 90 aa8.09□□□□□ -1.11
SRSF1-205ENST00000582730 PCOTHQ58A44 107 aa8.08□□□□□ -1.12
SRSF1-205ENST00000582730 C8orf17Q9NRJ1 99 aa8.08□□□□□ -1.12
SRSF1-205ENST00000582730 DNAH11Q96DT5 4516 aa8.08□□□□□ -1.12
SRSF1-205ENST00000582730 KTN1-AS1Q86SY8 53 aa8.07□□□□□ -1.12
SRSF1-205ENST00000582730 ATP11AUNQ6ZP68 121 aa8.07□□□□□ -1.12
SRSF1-205ENST00000582730 A0A1B0GVX0 72 aa8.07□□□□□ -1.12
SRSF1-205ENST00000582730 DNAH5Q8TE73 4624 aa8.06□□□□□ -1.12
SRSF1-205ENST00000582730 HYDINQ4G0P3 5121 aa8.06□□□□□ -1.12
SRSF1-205ENST00000582730 SPAG11AQ6PDA7 123 aa8.03□□□□□ -1.12
SRSF1-205ENST00000582730 A0A087X002 238 aa8.03□□□□□ -1.12
SRSF1-205ENST00000582730 Q6ZSA8 131 aa8.03□□□□□ -1.12
SRSF1-205ENST00000582730 NOTCH2NLQ7Z3S9 236 aa8.03□□□□□ -1.12
SRSF1-205ENST00000582730 A6NN06 94 aa8.01□□□□□ -1.13
SRSF1-205ENST00000582730 SSBP3-AS1Q7Z2R9 100 aa8.01□□□□□ -1.13
SRSF1-205ENST00000582730 CDC42SE1Q9NRR8 79 aa8.01□□□□□ -1.13
SRSF1-205ENST00000582730 KRTAP21-3Q3LHN1 58 aa8□□□□□ -1.13
SRSF1-205ENST00000582730 RBM12B-AS1Q9P1G2 102 aa8□□□□□ -1.13
SRSF1-205ENST00000582730 LINC01558Q9Y6Z2 57 aa8□□□□□ -1.13
SRSF1-205ENST00000582730 ALMS1Q8TCU4 4167 aa8□□□□□ -1.13
SRSF1-205ENST00000582730 MRPL34Q9BQ48 92 aaKnown RBP7.99□□□□□ -1.13
SRSF1-205ENST00000582730 ASB16-AS1Q495Z4 193 aa7.98□□□□□ -1.13
SRSF1-205ENST00000582730 TP53AIP1Q9HCN2 124 aa7.98□□□□□ -1.13
SRSF1-205ENST00000582730 C4orf48Q5BLP8 95 aa7.98□□□□□ -1.13
SRSF1-205ENST00000582730 KRTAP13-2Q52LG2 175 aa7.97□□□□□ -1.13
SRSF1-205ENST00000582730 LRP1BQ9NZR2 4599 aa7.97□□□□□ -1.13
SRSF1-205ENST00000582730 PKD1P98161 4303 aa7.95□□□□□ -1.14
SRSF1-205ENST00000582730 HRES1P13985 223 aa7.95□□□□□ -1.14
SRSF1-205ENST00000582730 FAT2Q9NYQ8 4349 aa7.94□□□□□ -1.14
SRSF1-205ENST00000582730 SPINK7P58062 85 aa7.94□□□□□ -1.14
SRSF1-205ENST00000582730 PLA2G1BP04054 148 aaKnown RBP7.91□□□□□ -1.14
SRSF1-205ENST00000582730 KRTAP1-4P0C5Y4 121 aa7.89□□□□□ -1.15
SRSF1-205ENST00000582730 C7orf65Q6ZTY9 151 aa7.89□□□□□ -1.15
SRSF1-205ENST00000582730 SMR3BP02814 79 aaPredicted RBP7.88□□□□□ -1.15
SRSF1-205ENST00000582730 H3BS24 57 aa7.87□□□□□ -1.15
SRSF1-205ENST00000582730 TYMSOSQ8TAI1 123 aa7.87□□□□□ -1.15
SRSF1-205ENST00000582730 LINC00313P59037 77 aa7.86□□□□□ -1.15
SRSF1-205ENST00000582730 PRR26Q8N8Z3 221 aa7.86□□□□□ -1.15
SRSF1-205ENST00000582730 RETNLBQ9BQ08 111 aa7.86□□□□□ -1.15
SRSF1-205ENST00000582730 C8orf87E5RJ46 101 aa7.85□□□□□ -1.15
SRSF1-205ENST00000582730 Q5W150 140 aa7.85□□□□□ -1.15
SRSF1-205ENST00000582730 VPS13BQ7Z7G8 4022 aa7.84□□□□□ -1.15
SRSF1-205ENST00000582730 PKHD1P08F94 4074 aa7.83□□□□□ -1.16
SRSF1-205ENST00000582730 SACSQ9NZJ4 4579 aa7.81□□□□□ -1.16
SRSF1-205ENST00000582730 SPINK1P00995 79 aa7.75□□□□□ -1.17
SRSF1-205ENST00000582730 KRTAP13-3Q3SY46 172 aa7.75□□□□□ -1.17
SRSF1-205ENST00000582730 LINC00304Q8N9R0 145 aa7.74□□□□□ -1.17
SRSF1-205ENST00000582730 FAM229AH3BQW9 127 aa7.74□□□□□ -1.17
SRSF1-205ENST00000582730 ACYP2P14621 99 aa7.74□□□□□ -1.17
SRSF1-205ENST00000582730 DYNC1H1Q14204 4646 aaKnown RBP7.72□□□□□ -1.17
SRSF1-205ENST00000582730 PRAC1Q96KF2 57 aa7.72□□□□□ -1.17
SRSF1-205ENST00000582730 A0A1B0GVY2 172 aa7.71□□□□□ -1.18
SRSF1-205ENST00000582730 KRTAP16-1A8MUX0 517 aa7.69□□□□□ -1.18
SRSF1-205ENST00000582730 ADM2Q7Z4H4 148 aa7.68□□□□□ -1.18
SRSF1-205ENST00000582730 IGKV2D-30A0A075B6S6 120 aa7.67□□□□□ -1.18
SRSF1-205ENST00000582730 IGKV2-30P06310 120 aa7.67□□□□□ -1.18
SRSF1-205ENST00000582730 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
SRSF1-205ENST00000582730 FAT1Q14517 4588 aa7.66□□□□□ -1.18
SRSF1-205ENST00000582730 A0A1B0GU69 56 aa7.65□□□□□ -1.18
SRSF1-205ENST00000582730 SPATA8Q6RVD6 105 aa7.61□□□□□ -1.19
SRSF1-205ENST00000582730 C9orf92A6NGG3 77 aa7.61□□□□□ -1.19
SRSF1-205ENST00000582730 KMT2CQ8NEZ4 4911 aaKnown RBP7.6□□□□□ -1.19
SRSF1-205ENST00000582730 RYR2Q92736 4967 aa7.6□□□□□ -1.19
SRSF1-205ENST00000582730 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.19
SRSF1-205ENST00000582730 APOBP04114 4563 aaKnown RBP7.59□□□□□ -1.19
SRSF1-205ENST00000582730 RPS29P62273 56 aaKnown RBP7.58□□□□□ -1.2
SRSF1-205ENST00000582730 MIR22HGQ0VDD5 57 aa7.56□□□□□ -1.2
SRSF1-205ENST00000582730 UQCR11O14957 56 aa7.54□□□□□ -1.2
SRSF1-205ENST00000582730 LINC01554Q52M75 96 aa7.54□□□□□ -1.2
SRSF1-205ENST00000582730 Q8N1X5 172 aa7.47□□□□□ -1.21
SRSF1-205ENST00000582730 Q5VSD8 79 aa7.46□□□□□ -1.22
SRSF1-205ENST00000582730 CSAG1Q6PB30 78 aa7.44□□□□□ -1.22
SRSF1-205ENST00000582730 FLG2Q5D862 2391 aaPredicted RBP7.42□□□□□ -1.22
SRSF1-205ENST00000582730 A8MUU9 505 aa7.41□□□□□ -1.22
SRSF1-205ENST00000582730 C20orf166-AS1Q96NR2 134 aa7.41□□□□□ -1.22
SRSF1-205ENST00000582730 PKHD1L1Q86WI1 4243 aa7.39□□□□□ -1.23
SRSF1-205ENST00000582730 LRP1Q07954 4544 aaKnown RBP7.38□□□□□ -1.23
SRSF1-205ENST00000582730 DMBT1Q9UGM3 2413 aaPredicted RBP7.37□□□□□ -1.23
SRSF1-205ENST00000582730 RYR3Q15413 4870 aa7.35□□□□□ -1.23
SRSF1-205ENST00000582730 KRTAP10-8P60410 259 aa7.32□□□□□ -1.24
SRSF1-205ENST00000582730 HSPG2P98160 4391 aa7.32□□□□□ -1.24
SRSF1-205ENST00000582730 KRTAP17-1Q9BYP8 105 aa7.27□□□□□ -1.24
SRSF1-205ENST00000582730 RYR1P21817 5038 aa7.25□□□□□ -1.25
SRSF1-205ENST00000582730 H0YAA0 97 aa7.25□□□□□ -1.25
SRSF1-205ENST00000582730 KIAA1109Q2LD37 5005 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 319.7 ms