RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 ATP5EP2Q5VTU8 51 aa4.94□□□□□ -1.62
PDLIM1P3-201ENST00000582370 NDUFB1O75438 58 aa4.93□□□□□ -1.62
PDLIM1P3-201ENST00000582370 A0A0G2JQZ4 141 aa4.92□□□□□ -1.62
PDLIM1P3-201ENST00000582370 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
PDLIM1P3-201ENST00000582370 CXCL6P80162 114 aa4.92□□□□□ -1.62
PDLIM1P3-201ENST00000582370 SIGMAR1Q99720 223 aa4.92□□□□□ -1.62
PDLIM1P3-201ENST00000582370 LINC00472Q9H8W2 130 aa4.92□□□□□ -1.62
PDLIM1P3-201ENST00000582370 BPY2O14599 106 aa4.91□□□□□ -1.62
PDLIM1P3-201ENST00000582370 C1orf195Q5TG92 126 aa4.91□□□□□ -1.62
PDLIM1P3-201ENST00000582370 Q6ZVQ6 151 aa4.91□□□□□ -1.62
PDLIM1P3-201ENST00000582370 RETNLBQ9BQ08 111 aa4.91□□□□□ -1.62
PDLIM1P3-201ENST00000582370 LINC00846Q9NV44 126 aa4.91□□□□□ -1.62
PDLIM1P3-201ENST00000582370 IGLV7-46A0A075B6I9 117 aa4.9□□□□□ -1.63
PDLIM1P3-201ENST00000582370 LINC00643Q86TS7 51 aa4.9□□□□□ -1.63
PDLIM1P3-201ENST00000582370 IGKV4-1P06312 121 aa4.89□□□□□ -1.63
PDLIM1P3-201ENST00000582370 A8MWP4 228 aa4.88□□□□□ -1.63
PDLIM1P3-201ENST00000582370 C8orf87E5RJ46 101 aa4.87□□□□□ -1.63
PDLIM1P3-201ENST00000582370 Q96NJ1 140 aa4.87□□□□□ -1.63
PDLIM1P3-201ENST00000582370 A0A1B0GVX0 72 aa4.85□□□□□ -1.63
PDLIM1P3-201ENST00000582370 KRTAP4-1Q9BYQ7 146 aa4.85□□□□□ -1.63
PDLIM1P3-201ENST00000582370 PRR15Q8IV56 129 aa4.84□□□□□ -1.63
PDLIM1P3-201ENST00000582370 IMUPQ9GZP8 106 aa4.84□□□□□ -1.63
PDLIM1P3-201ENST00000582370 LINC00313P59037 77 aa4.83□□□□□ -1.64
PDLIM1P3-201ENST00000582370 SEC61BP60468 96 aaKnown RBP4.83□□□□□ -1.64
PDLIM1P3-201ENST00000582370 LCE2CQ5TA81 110 aa4.83□□□□□ -1.64
PDLIM1P3-201ENST00000582370 LORP23490 312 aaPredicted RBP4.82□□□□□ -1.64
PDLIM1P3-201ENST00000582370 DSCR10P59022 87 aa4.81□□□□□ -1.64
PDLIM1P3-201ENST00000582370 MT1HP80294 61 aa4.81□□□□□ -1.64
PDLIM1P3-201ENST00000582370 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
PDLIM1P3-201ENST00000582370 IGHV6-1A0A0B4J1U7 121 aa4.8□□□□□ -1.64
PDLIM1P3-201ENST00000582370 DEFB116Q30KQ4 102 aa4.8□□□□□ -1.64
PDLIM1P3-201ENST00000582370 USH2AO75445 5202 aa4.79□□□□□ -1.64
PDLIM1P3-201ENST00000582370 IGKV3D-7A0A0C4DH55 119 aa4.79□□□□□ -1.64
PDLIM1P3-201ENST00000582370 KRTAP10-6P60371 365 aaPredicted RBP4.79□□□□□ -1.64
PDLIM1P3-201ENST00000582370 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
PDLIM1P3-201ENST00000582370 K7EQZ3 153 aa4.78□□□□□ -1.64
PDLIM1P3-201ENST00000582370 HIST1H4AP62805 103 aaKnown RBP4.78□□□□□ -1.64
PDLIM1P3-201ENST00000582370 C8orf17Q9NRJ1 99 aa4.78□□□□□ -1.64
PDLIM1P3-201ENST00000582370 HCG22E2RYF7 251 aa4.77□□□□□ -1.65
PDLIM1P3-201ENST00000582370 KRTAP19-2Q3LHN2 52 aa4.77□□□□□ -1.65
PDLIM1P3-201ENST00000582370 TMEM254Q8TBM7 123 aa4.77□□□□□ -1.65
PDLIM1P3-201ENST00000582370 hDV103S1A0JD37 113 aa4.76□□□□□ -1.65
PDLIM1P3-201ENST00000582370 CASC2Q6XLA1 102 aa4.76□□□□□ -1.65
PDLIM1P3-201ENST00000582370 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
PDLIM1P3-201ENST00000582370 Q75L30 129 aa4.75□□□□□ -1.65
PDLIM1P3-201ENST00000582370 TP53AIP1Q9HCN2 124 aa4.75□□□□□ -1.65
PDLIM1P3-201ENST00000582370 MMP24-AS1A0A0U1RRL7 71 aa4.74□□□□□ -1.65
PDLIM1P3-201ENST00000582370 XP32Q5T750 250 aa4.74□□□□□ -1.65
PDLIM1P3-201ENST00000582370 MRPL34Q9BQ48 92 aaKnown RBP4.74□□□□□ -1.65
PDLIM1P3-201ENST00000582370 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
PDLIM1P3-201ENST00000582370 Q8N9P0 234 aaPredicted RBP4.73□□□□□ -1.65
PDLIM1P3-201ENST00000582370 C20orf166-AS1Q96NR2 134 aa4.73□□□□□ -1.65
PDLIM1P3-201ENST00000582370 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
PDLIM1P3-201ENST00000582370 C9orf92A6NGG3 77 aa4.72□□□□□ -1.65
PDLIM1P3-201ENST00000582370 ATP11AUNQ6ZP68 121 aa4.72□□□□□ -1.65
PDLIM1P3-201ENST00000582370 SMIM20Q8N5G0 67 aa4.72□□□□□ -1.65
PDLIM1P3-201ENST00000582370 FLGP20930 4061 aaPredicted RBP4.71□□□□□ -1.66
PDLIM1P3-201ENST00000582370 A8MUU9 505 aa4.71□□□□□ -1.66
PDLIM1P3-201ENST00000582370 Q8N9L7 120 aa4.71□□□□□ -1.66
PDLIM1P3-201ENST00000582370 KRTAP16-1A8MUX0 517 aa4.7□□□□□ -1.66
PDLIM1P3-201ENST00000582370 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
PDLIM1P3-201ENST00000582370 M0R2T5 61 aa4.69□□□□□ -1.66
PDLIM1P3-201ENST00000582370 SCGB1A1P11684 91 aa4.69□□□□□ -1.66
PDLIM1P3-201ENST00000582370 WFDC13Q8IUB5 93 aa4.69□□□□□ -1.66
PDLIM1P3-201ENST00000582370 NDUFS5O43920 106 aa4.68□□□□□ -1.66
PDLIM1P3-201ENST00000582370 MT-ATP8P03928 68 aa4.68□□□□□ -1.66
PDLIM1P3-201ENST00000582370 NOTCH2NLQ7Z3S9 236 aa4.67□□□□□ -1.66
PDLIM1P3-201ENST00000582370 ATOX1O00244 68 aa4.66□□□□□ -1.66
PDLIM1P3-201ENST00000582370 UQCRQO14949 82 aa4.66□□□□□ -1.66
PDLIM1P3-201ENST00000582370 A0A087WVE0 104 aa4.65□□□□□ -1.67
PDLIM1P3-201ENST00000582370 ZCCHC13Q8WW36 166 aaKnown RBP4.65□□□□□ -1.67
PDLIM1P3-201ENST00000582370 FAM236AA0A1B0GUQ0 79 aa4.63□□□□□ -1.67
PDLIM1P3-201ENST00000582370 FAM236BA0A1B0GV22 79 aa4.63□□□□□ -1.67
PDLIM1P3-201ENST00000582370 C5orf47Q569G3 176 aa4.63□□□□□ -1.67
PDLIM1P3-201ENST00000582370 H3BPC8 53 aa4.62□□□□□ -1.67
PDLIM1P3-201ENST00000582370 MP68P56378 58 aa4.62□□□□□ -1.67
PDLIM1P3-201ENST00000582370 TRAV22A0A0B4J277 110 aa4.61□□□□□ -1.67
PDLIM1P3-201ENST00000582370 TRAV7A0A075B6U4 112 aa4.6□□□□□ -1.67
PDLIM1P3-201ENST00000582370 OCR1Q9BZK8 76 aa4.6□□□□□ -1.67
PDLIM1P3-201ENST00000582370 PCOTHQ58A44 107 aa4.59□□□□□ -1.67
PDLIM1P3-201ENST00000582370 LOC101927531A0A1B0GV80 90 aa4.58□□□□□ -1.68
PDLIM1P3-201ENST00000582370 COX6B2Q6YFQ2 88 aa4.58□□□□□ -1.68
PDLIM1P3-201ENST00000582370 C7orf65Q6ZTY9 151 aa4.57□□□□□ -1.68
PDLIM1P3-201ENST00000582370 SERP2Q8N6R1 65 aa4.56□□□□□ -1.68
PDLIM1P3-201ENST00000582370 H0Y9P7 68 aa4.55□□□□□ -1.68
PDLIM1P3-201ENST00000582370 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
PDLIM1P3-201ENST00000582370 SPINK7P58062 85 aa4.53□□□□□ -1.68
PDLIM1P3-201ENST00000582370 Q5W150 140 aa4.53□□□□□ -1.68
PDLIM1P3-201ENST00000582370 IGKV2-30P06310 120 aa4.52□□□□□ -1.69
PDLIM1P3-201ENST00000582370 C1orf64Q8NEQ6 169 aa4.52□□□□□ -1.69
PDLIM1P3-201ENST00000582370 RBM12B-AS1Q9P1G2 102 aa4.52□□□□□ -1.69
PDLIM1P3-201ENST00000582370 ANAPC13Q9BS18 74 aa4.51□□□□□ -1.69
PDLIM1P3-201ENST00000582370 COX7CP15954 63 aa4.5□□□□□ -1.69
PDLIM1P3-201ENST00000582370 LINC00208Q96KT6 92 aa4.5□□□□□ -1.69
PDLIM1P3-201ENST00000582370 CYP4F30PQ9H0H9 118 aa4.5□□□□□ -1.69
PDLIM1P3-201ENST00000582370 IGKV2D-30A0A075B6S6 120 aa4.49□□□□□ -1.69
PDLIM1P3-201ENST00000582370 NDUFC1O43677 76 aa4.49□□□□□ -1.69
PDLIM1P3-201ENST00000582370 NEBP20929 6669 aa4.48□□□□□ -1.69
PDLIM1P3-201ENST00000582370 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
PDLIM1P3-201ENST00000582370 KLKP1Q107X0 134 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms