RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 ORMDL1Q9P0S3 153 aa5.2□□□□□ -1.58
RFFL-209ENST00000581265 DNAL4O96015 105 aa5.19□□□□□ -1.58
RFFL-209ENST00000581265 CCKP06307 115 aa5.19□□□□□ -1.58
RFFL-209ENST00000581265 FXYD2P54710 66 aa5.19□□□□□ -1.58
RFFL-209ENST00000581265 KRTAP20-1Q3LI63 56 aa5.19□□□□□ -1.58
RFFL-209ENST00000581265 MTURNQ8N3F0 131 aa5.19□□□□□ -1.58
RFFL-209ENST00000581265 TRACP01848 142 aa5.18□□□□□ -1.58
RFFL-209ENST00000581265 KRTAP19-6Q3LI70 58 aa5.18□□□□□ -1.58
RFFL-209ENST00000581265 A0A1B0GV72 72 aa5.17□□□□□ -1.58
RFFL-209ENST00000581265 C8orf87E5RJ46 101 aa5.17□□□□□ -1.58
RFFL-209ENST00000581265 S100A1P23297 94 aa5.17□□□□□ -1.58
RFFL-209ENST00000581265 VAMP8Q9BV40 100 aa5.17□□□□□ -1.58
RFFL-209ENST00000581265 A0A1B0GVX0 72 aa5.16□□□□□ -1.58
RFFL-209ENST00000581265 SPINK7P58062 85 aa5.15□□□□□ -1.59
RFFL-209ENST00000581265 UBE2V1Q13404 147 aa5.15□□□□□ -1.59
RFFL-209ENST00000581265 ZCCHC13Q8WW36 166 aaKnown RBP5.15□□□□□ -1.59
RFFL-209ENST00000581265 COX6CP09669 75 aa5.14□□□□□ -1.59
RFFL-209ENST00000581265 PSMB2P49721 201 aa5.14□□□□□ -1.59
RFFL-209ENST00000581265 J3KT08 172 aa5.11□□□□□ -1.59
RFFL-209ENST00000581265 RBM3P98179 157 aaKnown RBP5.11□□□□□ -1.59
RFFL-209ENST00000581265 Q8N9P0 234 aaPredicted RBP5.11□□□□□ -1.59
RFFL-209ENST00000581265 VPS25Q9BRG1 176 aa5.11□□□□□ -1.59
RFFL-209ENST00000581265 NEBP20929 6669 aa5.11□□□□□ -1.59
RFFL-209ENST00000581265 K7ERJ3 54 aa5.1□□□□□ -1.59
RFFL-209ENST00000581265 HSD52Q0P140 79 aa5.1□□□□□ -1.59
RFFL-209ENST00000581265 DSCR8Q96T75 97 aa5.1□□□□□ -1.59
RFFL-209ENST00000581265 A8MWP4 228 aa5.09□□□□□ -1.59
RFFL-209ENST00000581265 Q6ZQT0 140 aa5.08□□□□□ -1.6
RFFL-209ENST00000581265 NDUFB1O75438 58 aa5.07□□□□□ -1.6
RFFL-209ENST00000581265 C9JAW5 83 aa5.06□□□□□ -1.6
RFFL-209ENST00000581265 WFDC13Q8IUB5 93 aa5.06□□□□□ -1.6
RFFL-209ENST00000581265 BAALC-AS2P0C853 105 aa5.05□□□□□ -1.6
RFFL-209ENST00000581265 SCGB1C2P0DMR2 95 aa5.05□□□□□ -1.6
RFFL-209ENST00000581265 PYY3Q5JQD4 70 aa5.03□□□□□ -1.6
RFFL-209ENST00000581265 LYRM7Q5U5X0 104 aa5.03□□□□□ -1.6
RFFL-209ENST00000581265 C8orf17Q9NRJ1 99 aa5.03□□□□□ -1.6
RFFL-209ENST00000581265 A0A1B0GW54 56 aa5.02□□□□□ -1.61
RFFL-209ENST00000581265 IGKV3D-7A0A0C4DH55 119 aa5.01□□□□□ -1.61
RFFL-209ENST00000581265 Q6ZVQ6 151 aa5□□□□□ -1.61
RFFL-209ENST00000581265 UQCR10Q9UDW1 63 aa5□□□□□ -1.61
RFFL-209ENST00000581265 LOC110117498A0A087WWA1 95 aa4.98□□□□□ -1.61
RFFL-209ENST00000581265 JMJD7-PLA2G4BH0Y9G9 81 aa4.98□□□□□ -1.61
RFFL-209ENST00000581265 H1FX-AS1Q4G0G2 97 aa4.98□□□□□ -1.61
RFFL-209ENST00000581265 PRR15Q8IV56 129 aa4.98□□□□□ -1.61
RFFL-209ENST00000581265 PDE6GP18545 87 aa4.97□□□□□ -1.61
RFFL-209ENST00000581265 TMEM254Q8TBM7 123 aa4.94□□□□□ -1.62
RFFL-209ENST00000581265 MRPL34Q9BQ48 92 aaKnown RBP4.94□□□□□ -1.62
RFFL-209ENST00000581265 MMP24-AS1A0A0U1RRL7 71 aa4.93□□□□□ -1.62
RFFL-209ENST00000581265 ATXN8Q156A1 80 aa4.93□□□□□ -1.62
RFFL-209ENST00000581265 NREPQ16612 68 aa4.93□□□□□ -1.62
RFFL-209ENST00000581265 KRTAP2-3P0C7H8 128 aa4.91□□□□□ -1.62
RFFL-209ENST00000581265 KRTAP2-4Q9BYR9 128 aa4.91□□□□□ -1.62
RFFL-209ENST00000581265 C14orf132Q9NPU4 83 aa4.91□□□□□ -1.62
RFFL-209ENST00000581265 MUC12Q9UKN1 5478 aa4.91□□□□□ -1.62
RFFL-209ENST00000581265 hDV103S1A0JD37 113 aa4.9□□□□□ -1.63
RFFL-209ENST00000581265 NDUFS5O43920 106 aa4.89□□□□□ -1.63
RFFL-209ENST00000581265 Q5W150 140 aa4.88□□□□□ -1.63
RFFL-209ENST00000581265 NAA38Q9BRA0 125 aaKnown RBP4.88□□□□□ -1.63
RFFL-209ENST00000581265 IGKV2D-30A0A075B6S6 120 aa4.87□□□□□ -1.63
RFFL-209ENST00000581265 K7EQZ3 153 aa4.87□□□□□ -1.63
RFFL-209ENST00000581265 IGKV2-30P06310 120 aa4.87□□□□□ -1.63
RFFL-209ENST00000581265 M0R143 59 aa4.86□□□□□ -1.63
RFFL-209ENST00000581265 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
RFFL-209ENST00000581265 A6NN06 94 aa4.84□□□□□ -1.63
RFFL-209ENST00000581265 C4orf26Q17RF5 130 aa4.82□□□□□ -1.64
RFFL-209ENST00000581265 BPY2O14599 106 aa4.81□□□□□ -1.64
RFFL-209ENST00000581265 MT1BP07438 61 aa4.8□□□□□ -1.64
RFFL-209ENST00000581265 C5orf47Q569G3 176 aa4.79□□□□□ -1.64
RFFL-209ENST00000581265 CASC2Q6XLA1 102 aa4.79□□□□□ -1.64
RFFL-209ENST00000581265 FAM236AA0A1B0GUQ0 79 aa4.78□□□□□ -1.64
RFFL-209ENST00000581265 FAM236BA0A1B0GV22 79 aa4.78□□□□□ -1.64
RFFL-209ENST00000581265 HCG22E2RYF7 251 aa4.78□□□□□ -1.64
RFFL-209ENST00000581265 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
RFFL-209ENST00000581265 KRTAP19-8Q3LI54 63 aa4.78□□□□□ -1.64
RFFL-209ENST00000581265 SPRR2GQ9BYE4 73 aa4.78□□□□□ -1.64
RFFL-209ENST00000581265 H3BT86 120 aa4.77□□□□□ -1.65
RFFL-209ENST00000581265 CXCL6P80162 114 aa4.77□□□□□ -1.65
RFFL-209ENST00000581265 Q5VV11 94 aa4.77□□□□□ -1.65
RFFL-209ENST00000581265 KRTAP3-1Q9BYR8 98 aa4.77□□□□□ -1.65
RFFL-209ENST00000581265 CSAG1Q6PB30 78 aa4.76□□□□□ -1.65
RFFL-209ENST00000581265 Q8N9L7 120 aa4.76□□□□□ -1.65
RFFL-209ENST00000581265 KRTAP10-5P60370 271 aa4.73□□□□□ -1.65
RFFL-209ENST00000581265 S4R3F8 94 aa4.73□□□□□ -1.65
RFFL-209ENST00000581265 MDN1Q9NU22 5596 aa4.72□□□□□ -1.65
RFFL-209ENST00000581265 KMT2DO14686 5537 aa4.71□□□□□ -1.65
RFFL-209ENST00000581265 C9orf118A6NHY6 69 aa4.71□□□□□ -1.66
RFFL-209ENST00000581265 TSTD3H0UI37 97 aa4.71□□□□□ -1.66
RFFL-209ENST00000581265 LCA10Q71F78 164 aa4.71□□□□□ -1.66
RFFL-209ENST00000581265 C1orf64Q8NEQ6 169 aa4.71□□□□□ -1.66
RFFL-209ENST00000581265 KRTAP2-2Q9BYT5 123 aa4.71□□□□□ -1.66
RFFL-209ENST00000581265 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
RFFL-209ENST00000581265 A0A1W2PPM0 123 aa4.69□□□□□ -1.66
RFFL-209ENST00000581265 KLKP1Q107X0 134 aa4.69□□□□□ -1.66
RFFL-209ENST00000581265 BATFQ16520 125 aa4.69□□□□□ -1.66
RFFL-209ENST00000581265 TAX1BP3O14907 124 aa4.67□□□□□ -1.66
RFFL-209ENST00000581265 SMIM6P0DI80 62 aa4.67□□□□□ -1.66
RFFL-209ENST00000581265 SPRR2EP22531 72 aa4.67□□□□□ -1.66
RFFL-209ENST00000581265 SPRR2BP35325 72 aa4.67□□□□□ -1.66
RFFL-209ENST00000581265 SPRR2AP35326 72 aa4.67□□□□□ -1.66
RFFL-209ENST00000581265 UBL5Q9BZL1 73 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms