RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 KRTAP4-16G5E9R7 235 aaPredicted RBP8.04□□□□□ -1.12
IFT20-211ENST00000580991 ATOX1O00244 68 aa8.03□□□□□ -1.12
IFT20-211ENST00000580991 HIST1H4AP62805 103 aaKnown RBP8.03□□□□□ -1.12
IFT20-211ENST00000580991 PCOTHQ58A44 107 aa8.03□□□□□ -1.12
IFT20-211ENST00000580991 LINC00483Q53H64 154 aa8□□□□□ -1.13
IFT20-211ENST00000580991 Q9BRP9 147 aa8□□□□□ -1.13
IFT20-211ENST00000580991 MOBPQ13875 183 aa7.99□□□□□ -1.13
IFT20-211ENST00000580991 Q6ZVQ6 151 aa7.99□□□□□ -1.13
IFT20-211ENST00000580991 SSBP3-AS1Q7Z2R9 100 aa7.99□□□□□ -1.13
IFT20-211ENST00000580991 DEFB105AQ8NG35 78 aa7.99□□□□□ -1.13
IFT20-211ENST00000580991 IGLV5-48A0A075B6I7 105 aa7.98□□□□□ -1.13
IFT20-211ENST00000580991 CCDC179H3BU77 68 aa7.98□□□□□ -1.13
IFT20-211ENST00000580991 IGLV9-49A0A0B4J1Y8 123 aa7.97□□□□□ -1.13
IFT20-211ENST00000580991 A0A1B0GW54 56 aa7.97□□□□□ -1.13
IFT20-211ENST00000580991 CXCL6P80162 114 aa7.97□□□□□ -1.13
IFT20-211ENST00000580991 UQCRQO14949 82 aa7.95□□□□□ -1.14
IFT20-211ENST00000580991 A0A087WVE0 104 aa7.94□□□□□ -1.14
IFT20-211ENST00000580991 COX6B2Q6YFQ2 88 aa7.94□□□□□ -1.14
IFT20-211ENST00000580991 COX7CP15954 63 aa7.93□□□□□ -1.14
IFT20-211ENST00000580991 FLGP20930 4061 aaPredicted RBP7.93□□□□□ -1.14
IFT20-211ENST00000580991 F8WEM9 126 aa7.92□□□□□ -1.14
IFT20-211ENST00000580991 ST20-AS1Q8NBB2 130 aa7.92□□□□□ -1.14
IFT20-211ENST00000580991 ERC2-IT1O76042 136 aa7.91□□□□□ -1.14
IFT20-211ENST00000580991 C9orf153Q5TBE3 101 aa7.91□□□□□ -1.14
IFT20-211ENST00000580991 NREPQ16612 68 aa7.9□□□□□ -1.14
IFT20-211ENST00000580991 SERP2Q8N6R1 65 aa7.9□□□□□ -1.14
IFT20-211ENST00000580991 C9orf92A6NGG3 77 aa7.89□□□□□ -1.15
IFT20-211ENST00000580991 SMIM20Q8N5G0 67 aa7.87□□□□□ -1.15
IFT20-211ENST00000580991 SSPOA2VEC9 5147 aa7.86□□□□□ -1.15
IFT20-211ENST00000580991 A0A1W2PNM2 257 aa7.85□□□□□ -1.15
IFT20-211ENST00000580991 SMIM29Q86T20 159 aa7.85□□□□□ -1.15
IFT20-211ENST00000580991 BPY2O14599 106 aa7.84□□□□□ -1.15
IFT20-211ENST00000580991 USH2AO75445 5202 aa7.84□□□□□ -1.16
IFT20-211ENST00000580991 SPRR1BP22528 89 aa7.83□□□□□ -1.16
IFT20-211ENST00000580991 LIMD2Q9BT23 127 aa7.83□□□□□ -1.16
IFT20-211ENST00000580991 SS18L2Q9UHA2 77 aa7.82□□□□□ -1.16
IFT20-211ENST00000580991 TRAV7A0A075B6U4 112 aa7.81□□□□□ -1.16
IFT20-211ENST00000580991 FCGBPQ9Y6R7 5405 aaPredicted RBP7.79□□□□□ -1.16
IFT20-211ENST00000580991 IGKV4-1P06312 121 aa7.78□□□□□ -1.16
IFT20-211ENST00000580991 IGFL1Q6UW32 110 aa7.78□□□□□ -1.16
IFT20-211ENST00000580991 RPL37P61927 97 aaKnown RBP7.76□□□□□ -1.17
IFT20-211ENST00000580991 HRCT1Q6UXD1 115 aa7.74□□□□□ -1.17
IFT20-211ENST00000580991 TMEM258P61165 79 aa7.73□□□□□ -1.17
IFT20-211ENST00000580991 Q8N9L7 120 aa7.73□□□□□ -1.17
IFT20-211ENST00000580991 KRTAP9-8Q9BYQ0 159 aa7.71□□□□□ -1.18
IFT20-211ENST00000580991 C20orf197Q8N268 126 aa7.7□□□□□ -1.18
IFT20-211ENST00000580991 A0A087WSZ3 146 aa7.69□□□□□ -1.18
IFT20-211ENST00000580991 KRTAP19-1Q8IUB9 90 aa7.69□□□□□ -1.18
IFT20-211ENST00000580991 DSCR10P59022 87 aa7.68□□□□□ -1.18
IFT20-211ENST00000580991 A0A0G2JQZ4 141 aa7.66□□□□□ -1.18
IFT20-211ENST00000580991 KLKP1Q107X0 134 aa7.66□□□□□ -1.18
IFT20-211ENST00000580991 CD164Q04900 197 aa7.65□□□□□ -1.18
IFT20-211ENST00000580991 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.18
IFT20-211ENST00000580991 K7EQZ3 153 aa7.64□□□□□ -1.19
IFT20-211ENST00000580991 NDUFC1O43677 76 aa7.64□□□□□ -1.19
IFT20-211ENST00000580991 OCR1Q9BZK8 76 aa7.64□□□□□ -1.19
IFT20-211ENST00000580991 HCG22E2RYF7 251 aa7.63□□□□□ -1.19
IFT20-211ENST00000580991 C1orf195Q5TG92 126 aa7.63□□□□□ -1.19
IFT20-211ENST00000580991 Q5XG85 94 aa7.63□□□□□ -1.19
IFT20-211ENST00000580991 J3KT08 172 aa7.62□□□□□ -1.19
IFT20-211ENST00000580991 TMEM254Q8TBM7 123 aa7.6□□□□□ -1.19
IFT20-211ENST00000580991 FAM236DA0A1B0GTK5 79 aa7.59□□□□□ -1.19
IFT20-211ENST00000580991 FAM236CP0DP71 79 aa7.59□□□□□ -1.19
IFT20-211ENST00000580991 RPS28P62857 69 aaKnown RBP7.59□□□□□ -1.19
IFT20-211ENST00000580991 SNURFQ9Y675 71 aa7.59□□□□□ -1.19
IFT20-211ENST00000580991 A8MWP4 228 aa7.58□□□□□ -1.2
IFT20-211ENST00000580991 H7BZZ5 65 aa7.58□□□□□ -1.2
IFT20-211ENST00000580991 LINC00472Q9H8W2 130 aa7.58□□□□□ -1.2
IFT20-211ENST00000580991 LCE2BO14633 110 aa7.57□□□□□ -1.2
IFT20-211ENST00000580991 ATP5EP56381 51 aaPredicted RBP7.57□□□□□ -1.2
IFT20-211ENST00000580991 DEFB116Q30KQ4 102 aa7.57□□□□□ -1.2
IFT20-211ENST00000580991 SYNE2Q8WXH0 6885 aaKnown RBP7.57□□□□□ -1.2
IFT20-211ENST00000580991 PRR15Q8IV56 129 aa7.56□□□□□ -1.2
IFT20-211ENST00000580991 NDUFB1O75438 58 aa7.55□□□□□ -1.2
IFT20-211ENST00000580991 ATP11AUNQ6ZP68 121 aa7.55□□□□□ -1.2
IFT20-211ENST00000580991 MACF1Q9UPN3 7388 aaKnown RBP7.55□□□□□ -1.2
IFT20-211ENST00000580991 MT2AP02795 61 aa7.53□□□□□ -1.2
IFT20-211ENST00000580991 C5orf47Q569G3 176 aa7.53□□□□□ -1.2
IFT20-211ENST00000580991 CASC2Q6XLA1 102 aa7.52□□□□□ -1.21
IFT20-211ENST00000580991 WFDC13Q8IUB5 93 aa7.52□□□□□ -1.21
IFT20-211ENST00000580991 Q75L30 129 aa7.49□□□□□ -1.21
IFT20-211ENST00000580991 KRTAP9-3Q9BYQ3 159 aa7.49□□□□□ -1.21
IFT20-211ENST00000580991 SERP1Q9Y6X1 66 aa7.49□□□□□ -1.21
IFT20-211ENST00000580991 Q96NJ1 140 aa7.48□□□□□ -1.21
IFT20-211ENST00000580991 MT1FP04733 61 aa7.47□□□□□ -1.21
IFT20-211ENST00000580991 MP68P56378 58 aa7.47□□□□□ -1.21
IFT20-211ENST00000580991 MMP24-AS1A0A0U1RRL7 71 aa7.46□□□□□ -1.22
IFT20-211ENST00000580991 H3BPC8 53 aa7.45□□□□□ -1.22
IFT20-211ENST00000580991 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
IFT20-211ENST00000580991 ZCCHC13Q8WW36 166 aaKnown RBP7.44□□□□□ -1.22
IFT20-211ENST00000580991 A0A1B0GVX0 72 aa7.43□□□□□ -1.22
IFT20-211ENST00000580991 hDV103S1A0JD37 113 aa7.43□□□□□ -1.22
IFT20-211ENST00000580991 KRTAP6-3Q3LI67 103 aa7.43□□□□□ -1.22
IFT20-211ENST00000580991 C8orf17Q9NRJ1 99 aa7.42□□□□□ -1.22
IFT20-211ENST00000580991 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
IFT20-211ENST00000580991 H0Y9P7 68 aa7.4□□□□□ -1.22
IFT20-211ENST00000580991 TP53AIP1Q9HCN2 124 aa7.4□□□□□ -1.22
IFT20-211ENST00000580991 IGHV6-1A0A0B4J1U7 121 aa7.38□□□□□ -1.23
IFT20-211ENST00000580991 TRAV22A0A0B4J277 110 aa7.36□□□□□ -1.23
IFT20-211ENST00000580991 LINC00208Q96KT6 92 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms