RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
SSH2-208ENST00000579040 LINC00472Q9H8W2 130 aa5.88□□□□□ -1.47
SSH2-208ENST00000579040 FSIP2Q5CZC0 6907 aa5.85□□□□□ -1.47
SSH2-208ENST00000579040 DEFB116Q30KQ4 102 aa5.84□□□□□ -1.47
SSH2-208ENST00000579040 NOTCH2NLQ7Z3S9 236 aa5.84□□□□□ -1.47
SSH2-208ENST00000579040 IGHV6-1A0A0B4J1U7 121 aa5.83□□□□□ -1.48
SSH2-208ENST00000579040 SCGB1C2P0DMR2 95 aa5.83□□□□□ -1.48
SSH2-208ENST00000579040 RBM3P98179 157 aaKnown RBP5.83□□□□□ -1.48
SSH2-208ENST00000579040 C21orf62-AS1Q17RA5 79 aa5.83□□□□□ -1.48
SSH2-208ENST00000579040 C8orf87E5RJ46 101 aa5.82□□□□□ -1.48
SSH2-208ENST00000579040 COL5A1-AS1Q5SY13 56 aa5.82□□□□□ -1.48
SSH2-208ENST00000579040 DSCR8Q96T75 97 aa5.82□□□□□ -1.48
SSH2-208ENST00000579040 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
SSH2-208ENST00000579040 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
SSH2-208ENST00000579040 A0A1B0GV90 55 aa5.81□□□□□ -1.48
SSH2-208ENST00000579040 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
SSH2-208ENST00000579040 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
SSH2-208ENST00000579040 MPLKIPQ8TAP9 179 aa5.81□□□□□ -1.48
SSH2-208ENST00000579040 VPS25Q9BRG1 176 aa5.81□□□□□ -1.48
SSH2-208ENST00000579040 RBM12B-AS1Q9P1G2 102 aa5.81□□□□□ -1.48
SSH2-208ENST00000579040 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
SSH2-208ENST00000579040 J3KT08 172 aa5.79□□□□□ -1.48
SSH2-208ENST00000579040 TAX1BP3O14907 124 aa5.79□□□□□ -1.48
SSH2-208ENST00000579040 HRES1P13985 223 aa5.79□□□□□ -1.48
SSH2-208ENST00000579040 C9JAW5 83 aa5.78□□□□□ -1.48
SSH2-208ENST00000579040 BAALC-AS2P0C853 105 aa5.78□□□□□ -1.48
SSH2-208ENST00000579040 Q6ZQT0 140 aa5.75□□□□□ -1.49
SSH2-208ENST00000579040 NAA38Q9BRA0 125 aaKnown RBP5.75□□□□□ -1.49
SSH2-208ENST00000579040 A0A1B0GW54 56 aa5.74□□□□□ -1.49
SSH2-208ENST00000579040 NDUFB1O75438 58 aa5.74□□□□□ -1.49
SSH2-208ENST00000579040 ZCCHC13Q8WW36 166 aaKnown RBP5.74□□□□□ -1.49
SSH2-208ENST00000579040 JMJD7-PLA2G4BH0Y9G9 81 aa5.73□□□□□ -1.49
SSH2-208ENST00000579040 MT2AP02795 61 aa5.73□□□□□ -1.49
SSH2-208ENST00000579040 ATXN8Q156A1 80 aa5.73□□□□□ -1.49
SSH2-208ENST00000579040 MTURNQ8N3F0 131 aa5.73□□□□□ -1.49
SSH2-208ENST00000579040 LOC110117498A0A087WWA1 95 aa5.72□□□□□ -1.49
SSH2-208ENST00000579040 C9orf118A6NHY6 69 aa5.72□□□□□ -1.49
SSH2-208ENST00000579040 PDE6GP18545 87 aa5.71□□□□□ -1.5
SSH2-208ENST00000579040 Q8N9P0 234 aaPredicted RBP5.71□□□□□ -1.5
SSH2-208ENST00000579040 A8MWP4 228 aa5.7□□□□□ -1.5
SSH2-208ENST00000579040 KRTAP4-12Q9BQ66 201 aa5.7□□□□□ -1.5
SSH2-208ENST00000579040 A0A1W2PPM0 123 aa5.69□□□□□ -1.5
SSH2-208ENST00000579040 SPINK7P58062 85 aa5.69□□□□□ -1.5
SSH2-208ENST00000579040 MT1FP04733 61 aa5.68□□□□□ -1.5
SSH2-208ENST00000579040 C8orf17Q9NRJ1 99 aa5.68□□□□□ -1.5
SSH2-208ENST00000579040 LYRM7Q5U5X0 104 aa5.67□□□□□ -1.5
SSH2-208ENST00000579040 IGKV3D-7A0A0C4DH55 119 aa5.66□□□□□ -1.5
SSH2-208ENST00000579040 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
SSH2-208ENST00000579040 K7EP34 96 aa5.65□□□□□ -1.5
SSH2-208ENST00000579040 C14orf132Q9NPU4 83 aa5.65□□□□□ -1.5
SSH2-208ENST00000579040 Q6ZVQ6 151 aa5.64□□□□□ -1.51
SSH2-208ENST00000579040 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
SSH2-208ENST00000579040 SPCS1Q9Y6A9 102 aa5.64□□□□□ -1.51
SSH2-208ENST00000579040 PRR15Q8IV56 129 aa5.63□□□□□ -1.51
SSH2-208ENST00000579040 NREPQ16612 68 aa5.62□□□□□ -1.51
SSH2-208ENST00000579040 WFDC13Q8IUB5 93 aa5.62□□□□□ -1.51
SSH2-208ENST00000579040 TMEM254Q8TBM7 123 aa5.6□□□□□ -1.51
SSH2-208ENST00000579040 MMP24-AS1A0A0U1RRL7 71 aa5.59□□□□□ -1.51
SSH2-208ENST00000579040 GTF2H5Q6ZYL4 71 aa5.59□□□□□ -1.51
SSH2-208ENST00000579040 MRPL34Q9BQ48 92 aaKnown RBP5.59□□□□□ -1.51
SSH2-208ENST00000579040 USH2AO75445 5202 aa5.59□□□□□ -1.51
SSH2-208ENST00000579040 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
SSH2-208ENST00000579040 H3BT86 120 aa5.57□□□□□ -1.52
SSH2-208ENST00000579040 LCE1DQ5T752 114 aa5.57□□□□□ -1.52
SSH2-208ENST00000579040 PRO0461Q9UI25 63 aa5.57□□□□□ -1.52
SSH2-208ENST00000579040 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
SSH2-208ENST00000579040 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
SSH2-208ENST00000579040 K7EQZ3 153 aa5.55□□□□□ -1.52
SSH2-208ENST00000579040 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
SSH2-208ENST00000579040 SMCPP49901 116 aaPredicted RBP5.54□□□□□ -1.52
SSH2-208ENST00000579040 SSPOA2VEC9 5147 aa5.54□□□□□ -1.52
SSH2-208ENST00000579040 NDUFS5O43920 106 aa5.53□□□□□ -1.52
SSH2-208ENST00000579040 BPY2O14599 106 aa5.52□□□□□ -1.53
SSH2-208ENST00000579040 H1FX-AS1Q4G0G2 97 aa5.52□□□□□ -1.53
SSH2-208ENST00000579040 LINC00846Q9NV44 126 aa5.51□□□□□ -1.53
SSH2-208ENST00000579040 F8W1H4 67 aa5.5□□□□□ -1.53
SSH2-208ENST00000579040 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
SSH2-208ENST00000579040 C7orf65Q6ZTY9 151 aa5.49□□□□□ -1.53
SSH2-208ENST00000579040 FCGBPQ9Y6R7 5405 aaPredicted RBP5.48□□□□□ -1.53
SSH2-208ENST00000579040 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
SSH2-208ENST00000579040 IGKV2D-30A0A075B6S6 120 aa5.47□□□□□ -1.53
SSH2-208ENST00000579040 IGKV2-30P06310 120 aa5.47□□□□□ -1.53
SSH2-208ENST00000579040 ETDBQ3ZM63 59 aa5.47□□□□□ -1.53
SSH2-208ENST00000579040 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
SSH2-208ENST00000579040 Q5W150 140 aa5.46□□□□□ -1.54
SSH2-208ENST00000579040 CASC2Q6XLA1 102 aa5.46□□□□□ -1.54
SSH2-208ENST00000579040 HCG22E2RYF7 251 aa5.43□□□□□ -1.54
SSH2-208ENST00000579040 Q8N9L7 120 aa5.43□□□□□ -1.54
SSH2-208ENST00000579040 CXCL6P80162 114 aa5.42□□□□□ -1.54
SSH2-208ENST00000579040 UBL5Q9BZL1 73 aa5.39□□□□□ -1.55
SSH2-208ENST00000579040 C4orf26Q17RF5 130 aa5.38□□□□□ -1.55
SSH2-208ENST00000579040 K7ERU9 68 aa5.37□□□□□ -1.55
SSH2-208ENST00000579040 J3QR89 54 aa5.32□□□□□ -1.56
SSH2-208ENST00000579040 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
SSH2-208ENST00000579040 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
SSH2-208ENST00000579040 S4R3F8 94 aa5.3□□□□□ -1.56
SSH2-208ENST00000579040 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
SSH2-208ENST00000579040 FAM236AA0A1B0GUQ0 79 aa5.28□□□□□ -1.56
SSH2-208ENST00000579040 FAM236BA0A1B0GV22 79 aa5.28□□□□□ -1.56
SSH2-208ENST00000579040 C1orf64Q8NEQ6 169 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms