RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 VPS25Q9BRG1 176 aa4.4□□□□□ -1.71
GGA3-207ENST00000578896 TRACP01848 142 aa4.39□□□□□ -1.71
GGA3-207ENST00000578896 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
GGA3-207ENST00000578896 TMEM256-PLSCR3K7ERE1 68 aa4.37□□□□□ -1.71
GGA3-207ENST00000578896 A0A1B0GVX0 72 aa4.36□□□□□ -1.71
GGA3-207ENST00000578896 SPINK7P58062 85 aa4.35□□□□□ -1.71
GGA3-207ENST00000578896 HSD52Q0P140 79 aa4.35□□□□□ -1.71
GGA3-207ENST00000578896 UBE2V1Q13404 147 aa4.35□□□□□ -1.71
GGA3-207ENST00000578896 ZCCHC13Q8WW36 166 aaKnown RBP4.35□□□□□ -1.71
GGA3-207ENST00000578896 C8orf87E5RJ46 101 aa4.34□□□□□ -1.71
GGA3-207ENST00000578896 H3BQ85 93 aa4.34□□□□□ -1.71
GGA3-207ENST00000578896 COX6CP09669 75 aa4.34□□□□□ -1.71
GGA3-207ENST00000578896 RBM3P98179 157 aaKnown RBP4.33□□□□□ -1.72
GGA3-207ENST00000578896 PYY3Q5JQD4 70 aa4.33□□□□□ -1.72
GGA3-207ENST00000578896 SCGB1C2P0DMR2 95 aa4.32□□□□□ -1.72
GGA3-207ENST00000578896 MTURNQ8N3F0 131 aa4.31□□□□□ -1.72
GGA3-207ENST00000578896 DSCR8Q96T75 97 aa4.31□□□□□ -1.72
GGA3-207ENST00000578896 BAALC-AS2P0C853 105 aa4.3□□□□□ -1.72
GGA3-207ENST00000578896 C9JAW5 83 aa4.29□□□□□ -1.72
GGA3-207ENST00000578896 LYRM7Q5U5X0 104 aa4.29□□□□□ -1.72
GGA3-207ENST00000578896 Q6ZQT0 140 aa4.29□□□□□ -1.72
GGA3-207ENST00000578896 WFDC13Q8IUB5 93 aa4.29□□□□□ -1.72
GGA3-207ENST00000578896 J3KT08 172 aa4.28□□□□□ -1.72
GGA3-207ENST00000578896 Q8N9P0 234 aaPredicted RBP4.28□□□□□ -1.72
GGA3-207ENST00000578896 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
GGA3-207ENST00000578896 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
GGA3-207ENST00000578896 NAA38Q9BRA0 125 aaKnown RBP4.27□□□□□ -1.73
GGA3-207ENST00000578896 UQCR10Q9UDW1 63 aa4.27□□□□□ -1.73
GGA3-207ENST00000578896 IGKV3D-7A0A0C4DH55 119 aa4.26□□□□□ -1.73
GGA3-207ENST00000578896 NDUFB1O75438 58 aa4.26□□□□□ -1.73
GGA3-207ENST00000578896 A8MWP4 228 aa4.25□□□□□ -1.73
GGA3-207ENST00000578896 Q6ZVQ6 151 aa4.24□□□□□ -1.73
GGA3-207ENST00000578896 TMA7Q9Y2S6 64 aaKnown RBP4.23□□□□□ -1.73
GGA3-207ENST00000578896 C14orf132Q9NPU4 83 aa4.22□□□□□ -1.73
GGA3-207ENST00000578896 LINC00846Q9NV44 126 aa4.22□□□□□ -1.73
GGA3-207ENST00000578896 LOC110117498A0A087WWA1 95 aa4.2□□□□□ -1.74
GGA3-207ENST00000578896 ATXN8Q156A1 80 aa4.2□□□□□ -1.74
GGA3-207ENST00000578896 C21orf62-AS1Q17RA5 79 aa4.2□□□□□ -1.74
GGA3-207ENST00000578896 PRR15Q8IV56 129 aa4.2□□□□□ -1.74
GGA3-207ENST00000578896 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
GGA3-207ENST00000578896 JMJD7-PLA2G4BH0Y9G9 81 aa4.19□□□□□ -1.74
GGA3-207ENST00000578896 H1FX-AS1Q4G0G2 97 aa4.19□□□□□ -1.74
GGA3-207ENST00000578896 MRPL34Q9BQ48 92 aaKnown RBP4.19□□□□□ -1.74
GGA3-207ENST00000578896 NDUFS5O43920 106 aa4.18□□□□□ -1.74
GGA3-207ENST00000578896 NREPQ16612 68 aa4.18□□□□□ -1.74
GGA3-207ENST00000578896 IGKV2D-30A0A075B6S6 120 aa4.17□□□□□ -1.74
GGA3-207ENST00000578896 IGKV2-30P06310 120 aa4.17□□□□□ -1.74
GGA3-207ENST00000578896 TMEM254Q8TBM7 123 aa4.17□□□□□ -1.74
GGA3-207ENST00000578896 hDV103S1A0JD37 113 aa4.16□□□□□ -1.74
GGA3-207ENST00000578896 K7EQZ3 153 aa4.16□□□□□ -1.74
GGA3-207ENST00000578896 Q5W150 140 aa4.16□□□□□ -1.74
GGA3-207ENST00000578896 NEBP20929 6669 aa4.16□□□□□ -1.74
GGA3-207ENST00000578896 A0A1B0GW54 56 aa4.15□□□□□ -1.75
GGA3-207ENST00000578896 PDE6GP18545 87 aa4.15□□□□□ -1.75
GGA3-207ENST00000578896 KRTAP6-3Q3LI67 103 aa4.15□□□□□ -1.75
GGA3-207ENST00000578896 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
GGA3-207ENST00000578896 M0R143 59 aa4.13□□□□□ -1.75
GGA3-207ENST00000578896 Q8N9L7 120 aa4.12□□□□□ -1.75
GGA3-207ENST00000578896 C4orf26Q17RF5 130 aa4.11□□□□□ -1.75
GGA3-207ENST00000578896 BPY2O14599 106 aa4.1□□□□□ -1.75
GGA3-207ENST00000578896 BATFQ16520 125 aa4.1□□□□□ -1.75
GGA3-207ENST00000578896 C7orf65Q6ZTY9 151 aa4.1□□□□□ -1.75
GGA3-207ENST00000578896 HCG22E2RYF7 251 aa4.09□□□□□ -1.75
GGA3-207ENST00000578896 C5orf47Q569G3 176 aa4.09□□□□□ -1.75
GGA3-207ENST00000578896 SMCPP49901 116 aaPredicted RBP4.08□□□□□ -1.76
GGA3-207ENST00000578896 CASC2Q6XLA1 102 aa4.07□□□□□ -1.76
GGA3-207ENST00000578896 FAM236AA0A1B0GUQ0 79 aa4.06□□□□□ -1.76
GGA3-207ENST00000578896 FAM236BA0A1B0GV22 79 aa4.06□□□□□ -1.76
GGA3-207ENST00000578896 KRTAP3-1Q9BYR8 98 aa4.06□□□□□ -1.76
GGA3-207ENST00000578896 TSTD3H0UI37 97 aa4.05□□□□□ -1.76
GGA3-207ENST00000578896 MT1BP07438 61 aa4.05□□□□□ -1.76
GGA3-207ENST00000578896 A6NN06 94 aa4.04□□□□□ -1.76
GGA3-207ENST00000578896 H3BT86 120 aa4.04□□□□□ -1.76
GGA3-207ENST00000578896 C9orf118A6NHY6 69 aa4.03□□□□□ -1.76
GGA3-207ENST00000578896 TAX1BP3O14907 124 aa4.03□□□□□ -1.76
GGA3-207ENST00000578896 A0A1W2PPM0 123 aa4.02□□□□□ -1.77
GGA3-207ENST00000578896 S4R3F8 94 aa4.01□□□□□ -1.77
GGA3-207ENST00000578896 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
GGA3-207ENST00000578896 CXCL6P80162 114 aa4□□□□□ -1.77
GGA3-207ENST00000578896 Q5VV11 94 aa4□□□□□ -1.77
GGA3-207ENST00000578896 LCA10Q71F78 164 aa4□□□□□ -1.77
GGA3-207ENST00000578896 C1orf64Q8NEQ6 169 aa4□□□□□ -1.77
GGA3-207ENST00000578896 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
GGA3-207ENST00000578896 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
GGA3-207ENST00000578896 SMIM6P0DI80 62 aa3.99□□□□□ -1.77
GGA3-207ENST00000578896 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
GGA3-207ENST00000578896 CSAG1Q6PB30 78 aa3.99□□□□□ -1.77
GGA3-207ENST00000578896 KMT2DO14686 5537 aa3.98□□□□□ -1.77
GGA3-207ENST00000578896 SPRR2GQ9BYE4 73 aa3.98□□□□□ -1.77
GGA3-207ENST00000578896 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
GGA3-207ENST00000578896 SPCS1Q9Y6A9 102 aa3.96□□□□□ -1.78
GGA3-207ENST00000578896 A0A087WVE0 104 aa3.94□□□□□ -1.78
GGA3-207ENST00000578896 KLKP1Q107X0 134 aa3.94□□□□□ -1.78
GGA3-207ENST00000578896 UBL5Q9BZL1 73 aa3.94□□□□□ -1.78
GGA3-207ENST00000578896 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
GGA3-207ENST00000578896 PRO0461Q9UI25 63 aa3.91□□□□□ -1.78
GGA3-207ENST00000578896 IMUPQ9GZP8 106 aa3.89□□□□□ -1.79
GGA3-207ENST00000578896 LOC105371267A0A1B0GV96 52 aa3.88□□□□□ -1.79
GGA3-207ENST00000578896 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
GGA3-207ENST00000578896 CYP4F30PQ9H0H9 118 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms