RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 IGLV7-46A0A075B6I9 117 aa5.42□□□□□ -1.54
CDK5RAP3-208ENST00000578525 Q1T7F1 81 aa5.42□□□□□ -1.54
CDK5RAP3-208ENST00000578525 DNAH11Q96DT5 4516 aa5.42□□□□□ -1.54
CDK5RAP3-208ENST00000578525 PCOTHQ58A44 107 aa5.41□□□□□ -1.54
CDK5RAP3-208ENST00000578525 DNHD1Q96M86 4753 aa5.41□□□□□ -1.54
CDK5RAP3-208ENST00000578525 HECTD4Q9Y4D8 3996 aa5.41□□□□□ -1.54
CDK5RAP3-208ENST00000578525 LOC101927531A0A1B0GV80 90 aa5.4□□□□□ -1.54
CDK5RAP3-208ENST00000578525 KRTAP1-4P0C5Y4 121 aa5.4□□□□□ -1.54
CDK5RAP3-208ENST00000578525 LIMD2Q9BT23 127 aa5.4□□□□□ -1.54
CDK5RAP3-208ENST00000578525 C1orf195Q5TG92 126 aa5.39□□□□□ -1.55
CDK5RAP3-208ENST00000578525 LINC00336Q6ZUF6 198 aa5.39□□□□□ -1.55
CDK5RAP3-208ENST00000578525 DNAH5Q8TE73 4624 aa5.38□□□□□ -1.55
CDK5RAP3-208ENST00000578525 KRTAP13-3Q3SY46 172 aa5.38□□□□□ -1.55
CDK5RAP3-208ENST00000578525 V9GYY9 64 aa5.38□□□□□ -1.55
CDK5RAP3-208ENST00000578525 FBN3Q75N90 2809 aa5.38□□□□□ -1.55
CDK5RAP3-208ENST00000578525 LINC00313P59037 77 aa5.37□□□□□ -1.55
CDK5RAP3-208ENST00000578525 COA5Q86WW8 74 aa5.37□□□□□ -1.55
CDK5RAP3-208ENST00000578525 SRRM2Q9UQ35 2752 aaKnown RBP5.36□□□□□ -1.55
CDK5RAP3-208ENST00000578525 Q5W150 140 aa5.36□□□□□ -1.55
CDK5RAP3-208ENST00000578525 KMT2AQ03164 3969 aa5.36□□□□□ -1.55
CDK5RAP3-208ENST00000578525 PRO0628Q9UI54 55 aa5.35□□□□□ -1.55
CDK5RAP3-208ENST00000578525 FAM229AH3BQW9 127 aa5.34□□□□□ -1.55
CDK5RAP3-208ENST00000578525 C4orf48Q5BLP8 95 aa5.34□□□□□ -1.55
CDK5RAP3-208ENST00000578525 Q8N9P0 234 aaPredicted RBP5.34□□□□□ -1.55
CDK5RAP3-208ENST00000578525 TYMSOSQ8TAI1 123 aa5.34□□□□□ -1.55
CDK5RAP3-208ENST00000578525 PLA2G1BP04054 148 aaKnown RBP5.33□□□□□ -1.56
CDK5RAP3-208ENST00000578525 FRAS1Q86XX4 4008 aa5.33□□□□□ -1.56
CDK5RAP3-208ENST00000578525 KRTAP16-1A8MUX0 517 aa5.32□□□□□ -1.56
CDK5RAP3-208ENST00000578525 SPINK1P00995 79 aa5.32□□□□□ -1.56
CDK5RAP3-208ENST00000578525 BRK1Q8WUW1 75 aa5.32□□□□□ -1.56
CDK5RAP3-208ENST00000578525 PSPHP1O15172 72 aa5.3□□□□□ -1.56
CDK5RAP3-208ENST00000578525 PKD1P98161 4303 aa5.29□□□□□ -1.56
CDK5RAP3-208ENST00000578525 A0A1B0GVY2 172 aa5.29□□□□□ -1.56
CDK5RAP3-208ENST00000578525 A8MUN3 132 aa5.29□□□□□ -1.56
CDK5RAP3-208ENST00000578525 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
CDK5RAP3-208ENST00000578525 HRES1P13985 223 aa5.29□□□□□ -1.56
CDK5RAP3-208ENST00000578525 RPS29P62273 56 aaKnown RBP5.29□□□□□ -1.56
CDK5RAP3-208ENST00000578525 FAT2Q9NYQ8 4349 aa5.29□□□□□ -1.56
CDK5RAP3-208ENST00000578525 HYDINQ4G0P3 5121 aa5.28□□□□□ -1.56
CDK5RAP3-208ENST00000578525 SPAG11AQ6PDA7 123 aa5.28□□□□□ -1.56
CDK5RAP3-208ENST00000578525 LINC00304Q8N9R0 145 aa5.28□□□□□ -1.56
CDK5RAP3-208ENST00000578525 SACSQ9NZJ4 4579 aa5.27□□□□□ -1.57
CDK5RAP3-208ENST00000578525 Q5VV11 94 aa5.27□□□□□ -1.57
CDK5RAP3-208ENST00000578525 PRR26Q8N8Z3 221 aa5.27□□□□□ -1.57
CDK5RAP3-208ENST00000578525 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
CDK5RAP3-208ENST00000578525 LRP1BQ9NZR2 4599 aa5.26□□□□□ -1.57
CDK5RAP3-208ENST00000578525 PRR15LQ9BU68 103 aa5.26□□□□□ -1.57
CDK5RAP3-208ENST00000578525 TGP01266 2768 aa5.25□□□□□ -1.57
CDK5RAP3-208ENST00000578525 LINC01558Q9Y6Z2 57 aa5.25□□□□□ -1.57
CDK5RAP3-208ENST00000578525 SMR3BP02814 79 aaPredicted RBP5.24□□□□□ -1.57
CDK5RAP3-208ENST00000578525 ACYP2P14621 99 aa5.24□□□□□ -1.57
CDK5RAP3-208ENST00000578525 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
CDK5RAP3-208ENST00000578525 Q75L30 129 aa5.23□□□□□ -1.57
CDK5RAP3-208ENST00000578525 KRTAP10-4P60372 401 aaPredicted RBP5.22□□□□□ -1.57
CDK5RAP3-208ENST00000578525 CHKB-CPT1BH3BT56 60 aa5.21□□□□□ -1.58
CDK5RAP3-208ENST00000578525 IGKV2D-30A0A075B6S6 120 aa5.19□□□□□ -1.58
CDK5RAP3-208ENST00000578525 DYNC1H1Q14204 4646 aaKnown RBP5.18□□□□□ -1.58
CDK5RAP3-208ENST00000578525 A6NED7 52 aa5.15□□□□□ -1.59
CDK5RAP3-208ENST00000578525 C7orf65Q6ZTY9 151 aa5.15□□□□□ -1.59
CDK5RAP3-208ENST00000578525 A8MUU9 505 aa5.13□□□□□ -1.59
CDK5RAP3-208ENST00000578525 C20orf166-AS1Q96NR2 134 aa5.12□□□□□ -1.59
CDK5RAP3-208ENST00000578525 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
CDK5RAP3-208ENST00000578525 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
CDK5RAP3-208ENST00000578525 A8MU10 97 aa5.1□□□□□ -1.59
CDK5RAP3-208ENST00000578525 LCA10Q71F78 164 aa5.1□□□□□ -1.59
CDK5RAP3-208ENST00000578525 RYR2Q92736 4967 aa5.1□□□□□ -1.59
CDK5RAP3-208ENST00000578525 APOBP04114 4563 aaKnown RBP5.1□□□□□ -1.59
CDK5RAP3-208ENST00000578525 VPS13BQ7Z7G8 4022 aa5.09□□□□□ -1.59
CDK5RAP3-208ENST00000578525 SPINK7P58062 85 aa5.08□□□□□ -1.6
CDK5RAP3-208ENST00000578525 PKHD1L1Q86WI1 4243 aa5.08□□□□□ -1.6
CDK5RAP3-208ENST00000578525 A0A1B0GU69 56 aa5.06□□□□□ -1.6
CDK5RAP3-208ENST00000578525 ATP11AUNQ6ZP68 121 aa5.06□□□□□ -1.6
CDK5RAP3-208ENST00000578525 Q8N1X5 172 aa5.04□□□□□ -1.6
CDK5RAP3-208ENST00000578525 KRTAP10-8P60410 259 aa5.03□□□□□ -1.6
CDK5RAP3-208ENST00000578525 Q5VSD8 79 aa5.03□□□□□ -1.6
CDK5RAP3-208ENST00000578525 SPTSSBQ8NFR3 76 aa5.03□□□□□ -1.6
CDK5RAP3-208ENST00000578525 PMAIP1Q13794 54 aa5.02□□□□□ -1.61
CDK5RAP3-208ENST00000578525 PKHD1P08F94 4074 aa4.99□□□□□ -1.61
CDK5RAP3-208ENST00000578525 FAT1Q14517 4588 aa4.98□□□□□ -1.61
CDK5RAP3-208ENST00000578525 A6NN06 94 aa4.98□□□□□ -1.61
CDK5RAP3-208ENST00000578525 SPATA8Q6RVD6 105 aa4.96□□□□□ -1.62
CDK5RAP3-208ENST00000578525 UQCR11O14957 56 aa4.95□□□□□ -1.62
CDK5RAP3-208ENST00000578525 KRTAP3-1Q9BYR8 98 aa4.95□□□□□ -1.62
CDK5RAP3-208ENST00000578525 SEC61GP60059 68 aa4.94□□□□□ -1.62
CDK5RAP3-208ENST00000578525 COX6B2Q6YFQ2 88 aa4.94□□□□□ -1.62
CDK5RAP3-208ENST00000578525 RPL37P61927 97 aaKnown RBP4.93□□□□□ -1.62
CDK5RAP3-208ENST00000578525 MIR22HGQ0VDD5 57 aa4.93□□□□□ -1.62
CDK5RAP3-208ENST00000578525 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
CDK5RAP3-208ENST00000578525 FLG2Q5D862 2391 aaPredicted RBP4.92□□□□□ -1.62
CDK5RAP3-208ENST00000578525 FAT3Q8TDW7 4589 aa4.89□□□□□ -1.63
CDK5RAP3-208ENST00000578525 XP32Q5T750 250 aa4.89□□□□□ -1.63
CDK5RAP3-208ENST00000578525 KRTAP17-1Q9BYP8 105 aa4.89□□□□□ -1.63
CDK5RAP3-208ENST00000578525 RYR1P21817 5038 aa4.88□□□□□ -1.63
CDK5RAP3-208ENST00000578525 MT1HL1P0DM35 61 aa4.88□□□□□ -1.63
CDK5RAP3-208ENST00000578525 TNXBP22105 4242 aa4.85□□□□□ -1.63
CDK5RAP3-208ENST00000578525 HSPG2P98160 4391 aa4.85□□□□□ -1.63
CDK5RAP3-208ENST00000578525 KMT2CQ8NEZ4 4911 aaKnown RBP4.84□□□□□ -1.64
CDK5RAP3-208ENST00000578525 H1FX-AS1Q4G0G2 97 aa4.82□□□□□ -1.64
CDK5RAP3-208ENST00000578525 A0A1B0GU33 70 aa4.81□□□□□ -1.64
CDK5RAP3-208ENST00000578525 H0YAA0 97 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms