RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 hDV103S1A0JD37 113 aa6.55□□□□□ -1.36
SKA2-204ENST00000578519 H3BPC8 53 aa6.55□□□□□ -1.36
SKA2-204ENST00000578519 MP68P56378 58 aa6.55□□□□□ -1.36
SKA2-204ENST00000578519 TYMSOSQ8TAI1 123 aa6.55□□□□□ -1.36
SKA2-204ENST00000578519 TP53AIP1Q9HCN2 124 aa6.55□□□□□ -1.36
SKA2-204ENST00000578519 KRTAP29-1A8MX34 341 aaPredicted RBP6.54□□□□□ -1.36
SKA2-204ENST00000578519 C8orf87E5RJ46 101 aa6.54□□□□□ -1.36
SKA2-204ENST00000578519 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
SKA2-204ENST00000578519 SPAG11AQ6PDA7 123 aa6.54□□□□□ -1.36
SKA2-204ENST00000578519 Q96NJ1 140 aa6.54□□□□□ -1.36
SKA2-204ENST00000578519 DNAH2Q9P225 4427 aa6.53□□□□□ -1.36
SKA2-204ENST00000578519 SPINK1P00995 79 aa6.53□□□□□ -1.36
SKA2-204ENST00000578519 C8orf17Q9NRJ1 99 aa6.53□□□□□ -1.36
SKA2-204ENST00000578519 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
SKA2-204ENST00000578519 A0A087X002 238 aa6.51□□□□□ -1.37
SKA2-204ENST00000578519 IGHV6-1A0A0B4J1U7 121 aa6.51□□□□□ -1.37
SKA2-204ENST00000578519 MMP24-AS1A0A0U1RRL7 71 aa6.51□□□□□ -1.37
SKA2-204ENST00000578519 KRTAP1-4P0C5Y4 121 aa6.51□□□□□ -1.37
SKA2-204ENST00000578519 KRTAP13-2Q52LG2 175 aa6.51□□□□□ -1.37
SKA2-204ENST00000578519 TGP01266 2768 aa6.5□□□□□ -1.37
SKA2-204ENST00000578519 A0A0U1RQV1 116 aa6.5□□□□□ -1.37
SKA2-204ENST00000578519 RPS29P62273 56 aaKnown RBP6.5□□□□□ -1.37
SKA2-204ENST00000578519 SNURFQ9Y675 71 aa6.5□□□□□ -1.37
SKA2-204ENST00000578519 HECTD4Q9Y4D8 3996 aa6.5□□□□□ -1.37
SKA2-204ENST00000578519 SMR3BP02814 79 aaPredicted RBP6.48□□□□□ -1.37
SKA2-204ENST00000578519 MRPL34Q9BQ48 92 aaKnown RBP6.48□□□□□ -1.37
SKA2-204ENST00000578519 FAM236DA0A1B0GTK5 79 aa6.47□□□□□ -1.37
SKA2-204ENST00000578519 FAM236CP0DP71 79 aa6.47□□□□□ -1.37
SKA2-204ENST00000578519 RPS28P62857 69 aaKnown RBP6.47□□□□□ -1.37
SKA2-204ENST00000578519 H7BZZ5 65 aa6.46□□□□□ -1.38
SKA2-204ENST00000578519 LINC00304Q8N9R0 145 aa6.46□□□□□ -1.38
SKA2-204ENST00000578519 H0Y9P7 68 aa6.45□□□□□ -1.38
SKA2-204ENST00000578519 NDUFS5O43920 106 aa6.45□□□□□ -1.38
SKA2-204ENST00000578519 LINC00313P59037 77 aa6.45□□□□□ -1.38
SKA2-204ENST00000578519 C1orf195Q5TG92 126 aa6.44□□□□□ -1.38
SKA2-204ENST00000578519 TRAV22A0A0B4J277 110 aa6.43□□□□□ -1.38
SKA2-204ENST00000578519 LCE5AQ5TCM9 118 aa6.43□□□□□ -1.38
SKA2-204ENST00000578519 DNAH8Q96JB1 4490 aa6.43□□□□□ -1.38
SKA2-204ENST00000578519 FRAS1Q86XX4 4008 aa6.42□□□□□ -1.38
SKA2-204ENST00000578519 PRR26Q8N8Z3 221 aa6.41□□□□□ -1.38
SKA2-204ENST00000578519 LINC00208Q96KT6 92 aa6.41□□□□□ -1.38
SKA2-204ENST00000578519 CYSTM1Q9H1C7 97 aa6.41□□□□□ -1.38
SKA2-204ENST00000578519 ZCCHC13Q8WW36 166 aaKnown RBP6.4□□□□□ -1.38
SKA2-204ENST00000578519 SERP1Q9Y6X1 66 aa6.4□□□□□ -1.38
SKA2-204ENST00000578519 C1orf64Q8NEQ6 169 aa6.39□□□□□ -1.39
SKA2-204ENST00000578519 DNAH11Q96DT5 4516 aa6.37□□□□□ -1.39
SKA2-204ENST00000578519 DNAH5Q8TE73 4624 aa6.37□□□□□ -1.39
SKA2-204ENST00000578519 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
SKA2-204ENST00000578519 LOC101927531A0A1B0GV80 90 aa6.35□□□□□ -1.39
SKA2-204ENST00000578519 HYDINQ4G0P3 5121 aa6.34□□□□□ -1.39
SKA2-204ENST00000578519 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
SKA2-204ENST00000578519 FAT2Q9NYQ8 4349 aa6.34□□□□□ -1.4
SKA2-204ENST00000578519 PKD1P98161 4303 aa6.33□□□□□ -1.4
SKA2-204ENST00000578519 Q5VSD8 79 aa6.32□□□□□ -1.4
SKA2-204ENST00000578519 NOTCH2NLQ7Z3S9 236 aa6.32□□□□□ -1.4
SKA2-204ENST00000578519 Q8N9P0 234 aaPredicted RBP6.32□□□□□ -1.4
SKA2-204ENST00000578519 CYP4F30PQ9H0H9 118 aa6.31□□□□□ -1.4
SKA2-204ENST00000578519 SRRM2Q9UQ35 2752 aaKnown RBP6.28□□□□□ -1.4
SKA2-204ENST00000578519 SACSQ9NZJ4 4579 aa6.28□□□□□ -1.4
SKA2-204ENST00000578519 SMIM26A0A096LP01 95 aa6.27□□□□□ -1.41
SKA2-204ENST00000578519 IGLV7-46A0A075B6I9 117 aa6.25□□□□□ -1.41
SKA2-204ENST00000578519 KRTAP9-7A8MTY7 169 aa6.24□□□□□ -1.41
SKA2-204ENST00000578519 KRTAP16-1A8MUX0 517 aa6.24□□□□□ -1.41
SKA2-204ENST00000578519 Q8N1X5 172 aa6.24□□□□□ -1.41
SKA2-204ENST00000578519 KRTAP10-8P60410 259 aa6.23□□□□□ -1.41
SKA2-204ENST00000578519 PCOTHQ58A44 107 aa6.22□□□□□ -1.41
SKA2-204ENST00000578519 FP248Q71RG6 208 aaPredicted RBP6.22□□□□□ -1.41
SKA2-204ENST00000578519 LRP1BQ9NZR2 4599 aa6.22□□□□□ -1.41
SKA2-204ENST00000578519 Q5W150 140 aa6.21□□□□□ -1.42
SKA2-204ENST00000578519 RYR2Q92736 4967 aa6.2□□□□□ -1.42
SKA2-204ENST00000578519 KRTAP13-3Q3SY46 172 aa6.2□□□□□ -1.42
SKA2-204ENST00000578519 DYNC1H1Q14204 4646 aaKnown RBP6.2□□□□□ -1.42
SKA2-204ENST00000578519 IGKV2-30P06310 120 aa6.19□□□□□ -1.42
SKA2-204ENST00000578519 OXTP01178 125 aa6.17□□□□□ -1.42
SKA2-204ENST00000578519 PRR4Q16378 134 aa6.17□□□□□ -1.42
SKA2-204ENST00000578519 V9GYY9 64 aa6.17□□□□□ -1.42
SKA2-204ENST00000578519 VPS13BQ7Z7G8 4022 aa6.17□□□□□ -1.42
SKA2-204ENST00000578519 A8MUU9 505 aa6.15□□□□□ -1.42
SKA2-204ENST00000578519 C20orf166-AS1Q96NR2 134 aa6.15□□□□□ -1.42
SKA2-204ENST00000578519 RETNLBQ9BQ08 111 aa6.15□□□□□ -1.42
SKA2-204ENST00000578519 ACYP2P14621 99 aa6.14□□□□□ -1.43
SKA2-204ENST00000578519 C9orf92A6NGG3 77 aa6.13□□□□□ -1.43
SKA2-204ENST00000578519 C7orf65Q6ZTY9 151 aa6.13□□□□□ -1.43
SKA2-204ENST00000578519 IGKV2D-30A0A075B6S6 120 aa6.12□□□□□ -1.43
SKA2-204ENST00000578519 HRES1P13985 223 aa6.1□□□□□ -1.43
SKA2-204ENST00000578519 Q75L30 129 aa6.1□□□□□ -1.43
SKA2-204ENST00000578519 COA5Q86WW8 74 aa6.1□□□□□ -1.43
SKA2-204ENST00000578519 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
SKA2-204ENST00000578519 APOBP04114 4563 aaKnown RBP6.08□□□□□ -1.44
SKA2-204ENST00000578519 Q1T7F1 81 aa6.07□□□□□ -1.44
SKA2-204ENST00000578519 ATP11AUNQ6ZP68 121 aa6.07□□□□□ -1.44
SKA2-204ENST00000578519 PRO0628Q9UI54 55 aa6.07□□□□□ -1.44
SKA2-204ENST00000578519 PKHD1P08F94 4074 aa6.07□□□□□ -1.44
SKA2-204ENST00000578519 A8MUN3 132 aa6.06□□□□□ -1.44
SKA2-204ENST00000578519 CHKB-CPT1BH3BT56 60 aa6.06□□□□□ -1.44
SKA2-204ENST00000578519 DMAC1Q96GE9 116 aa6.06□□□□□ -1.44
SKA2-204ENST00000578519 MPLKIPQ8TAP9 179 aa6.05□□□□□ -1.44
SKA2-204ENST00000578519 KMT2CQ8NEZ4 4911 aaKnown RBP6.02□□□□□ -1.45
SKA2-204ENST00000578519 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
SKA2-204ENST00000578519 C4orf26Q17RF5 130 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms