RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 LINC00643Q86TS7 51 aa7.73□□□□□ -1.17
SRSF1-202ENST00000578430 CDIP1Q9H305 208 aa7.73□□□□□ -1.17
SRSF1-202ENST00000578430 MT1HL1P0DM35 61 aa7.72□□□□□ -1.17
SRSF1-202ENST00000578430 HMCN2Q8NDA2 5059 aa7.72□□□□□ -1.17
SRSF1-202ENST00000578430 TNXBP22105 4242 aa7.71□□□□□ -1.18
SRSF1-202ENST00000578430 UBR4Q5T4S7 5183 aa7.7□□□□□ -1.18
SRSF1-202ENST00000578430 J3KT08 172 aa7.7□□□□□ -1.18
SRSF1-202ENST00000578430 ATP5EP2Q5VTU8 51 aa7.7□□□□□ -1.18
SRSF1-202ENST00000578430 LINC00472Q9H8W2 130 aa7.7□□□□□ -1.18
SRSF1-202ENST00000578430 BPY2O14599 106 aa7.68□□□□□ -1.18
SRSF1-202ENST00000578430 CXCL6P80162 114 aa7.68□□□□□ -1.18
SRSF1-202ENST00000578430 SIGMAR1Q99720 223 aa7.67□□□□□ -1.18
SRSF1-202ENST00000578430 Q96NJ1 140 aa7.66□□□□□ -1.18
SRSF1-202ENST00000578430 C1orf195Q5TG92 126 aa7.64□□□□□ -1.19
SRSF1-202ENST00000578430 IGKV4-1P06312 121 aa7.63□□□□□ -1.19
SRSF1-202ENST00000578430 DEFB116Q30KQ4 102 aa7.61□□□□□ -1.19
SRSF1-202ENST00000578430 IGKV3D-7A0A0C4DH55 119 aa7.6□□□□□ -1.19
SRSF1-202ENST00000578430 A8MWP4 228 aa7.6□□□□□ -1.19
SRSF1-202ENST00000578430 NDUFB1O75438 58 aa7.6□□□□□ -1.19
SRSF1-202ENST00000578430 DSCR10P59022 87 aa7.59□□□□□ -1.19
SRSF1-202ENST00000578430 IMUPQ9GZP8 106 aa7.59□□□□□ -1.19
SRSF1-202ENST00000578430 MT-ATP8P03928 68 aa7.57□□□□□ -1.2
SRSF1-202ENST00000578430 FP248Q71RG6 208 aaPredicted RBP7.57□□□□□ -1.2
SRSF1-202ENST00000578430 PRR15Q8IV56 129 aa7.56□□□□□ -1.2
SRSF1-202ENST00000578430 A0A1B0GVX0 72 aa7.55□□□□□ -1.2
SRSF1-202ENST00000578430 K7EQZ3 153 aa7.54□□□□□ -1.2
SRSF1-202ENST00000578430 LCE1DQ5T752 114 aa7.54□□□□□ -1.2
SRSF1-202ENST00000578430 HIST1H4AP62805 103 aaKnown RBP7.53□□□□□ -1.2
SRSF1-202ENST00000578430 C8orf87E5RJ46 101 aa7.52□□□□□ -1.21
SRSF1-202ENST00000578430 Q8N9L7 120 aa7.52□□□□□ -1.21
SRSF1-202ENST00000578430 RETNLBQ9BQ08 111 aa7.51□□□□□ -1.21
SRSF1-202ENST00000578430 IGHV6-1A0A0B4J1U7 121 aa7.5□□□□□ -1.21
SRSF1-202ENST00000578430 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
SRSF1-202ENST00000578430 C8orf17Q9NRJ1 99 aa7.48□□□□□ -1.21
SRSF1-202ENST00000578430 LINC00313P59037 77 aa7.47□□□□□ -1.21
SRSF1-202ENST00000578430 IGLV7-46A0A075B6I9 117 aa7.46□□□□□ -1.22
SRSF1-202ENST00000578430 HCG22E2RYF7 251 aa7.46□□□□□ -1.22
SRSF1-202ENST00000578430 A0A087WVE0 104 aa7.45□□□□□ -1.22
SRSF1-202ENST00000578430 MMP24-AS1A0A0U1RRL7 71 aa7.45□□□□□ -1.22
SRSF1-202ENST00000578430 PRR4Q16378 134 aa7.44□□□□□ -1.22
SRSF1-202ENST00000578430 RNF213Q63HN8 5207 aa7.44□□□□□ -1.22
SRSF1-202ENST00000578430 LRP2P98164 4655 aa7.43□□□□□ -1.22
SRSF1-202ENST00000578430 hDV103S1A0JD37 113 aa7.43□□□□□ -1.22
SRSF1-202ENST00000578430 CASC2Q6XLA1 102 aa7.43□□□□□ -1.22
SRSF1-202ENST00000578430 TMEM254Q8TBM7 123 aa7.42□□□□□ -1.22
SRSF1-202ENST00000578430 NOTCH2NLQ7Z3S9 236 aa7.41□□□□□ -1.22
SRSF1-202ENST00000578430 WFDC13Q8IUB5 93 aa7.4□□□□□ -1.22
SRSF1-202ENST00000578430 FAM236AA0A1B0GUQ0 79 aa7.39□□□□□ -1.23
SRSF1-202ENST00000578430 FAM236BA0A1B0GV22 79 aa7.39□□□□□ -1.23
SRSF1-202ENST00000578430 SCGB1A1P11684 91 aa7.39□□□□□ -1.23
SRSF1-202ENST00000578430 MRPL34Q9BQ48 92 aaKnown RBP7.39□□□□□ -1.23
SRSF1-202ENST00000578430 TPRXLQ17RH7 258 aa7.38□□□□□ -1.23
SRSF1-202ENST00000578430 KRTAP13-3Q3SY46 172 aa7.38□□□□□ -1.23
SRSF1-202ENST00000578430 KRTAP16-1A8MUX0 517 aa7.37□□□□□ -1.23
SRSF1-202ENST00000578430 C9orf92A6NGG3 77 aa7.36□□□□□ -1.23
SRSF1-202ENST00000578430 Q8N9P0 234 aaPredicted RBP7.35□□□□□ -1.23
SRSF1-202ENST00000578430 ATOX1O00244 68 aa7.34□□□□□ -1.23
SRSF1-202ENST00000578430 SMIM20Q8N5G0 67 aa7.34□□□□□ -1.23
SRSF1-202ENST00000578430 TP53AIP1Q9HCN2 124 aa7.33□□□□□ -1.24
SRSF1-202ENST00000578430 C20orf166-AS1Q96NR2 134 aa7.32□□□□□ -1.24
SRSF1-202ENST00000578430 KRTAP4-9Q9BYQ8 210 aa7.32□□□□□ -1.24
SRSF1-202ENST00000578430 A8MUU9 505 aa7.31□□□□□ -1.24
SRSF1-202ENST00000578430 NDUFS5O43920 106 aa7.3□□□□□ -1.24
SRSF1-202ENST00000578430 Q75L30 129 aa7.3□□□□□ -1.24
SRSF1-202ENST00000578430 UQCRQO14949 82 aa7.28□□□□□ -1.24
SRSF1-202ENST00000578430 OCR1Q9BZK8 76 aa7.28□□□□□ -1.24
SRSF1-202ENST00000578430 TRAV7A0A075B6U4 112 aa7.27□□□□□ -1.25
SRSF1-202ENST00000578430 RPL37P61927 97 aaKnown RBP7.24□□□□□ -1.25
SRSF1-202ENST00000578430 SERP2Q8N6R1 65 aa7.23□□□□□ -1.25
SRSF1-202ENST00000578430 KRTAP19-4Q3LI73 84 aa7.22□□□□□ -1.25
SRSF1-202ENST00000578430 LPAP08519 4548 aa7.22□□□□□ -1.25
SRSF1-202ENST00000578430 C5orf47Q569G3 176 aa7.21□□□□□ -1.26
SRSF1-202ENST00000578430 ZCCHC13Q8WW36 166 aaKnown RBP7.21□□□□□ -1.26
SRSF1-202ENST00000578430 ANAPC13Q9BS18 74 aa7.21□□□□□ -1.26
SRSF1-202ENST00000578430 TRAV22A0A0B4J277 110 aa7.2□□□□□ -1.26
SRSF1-202ENST00000578430 ATP11AUNQ6ZP68 121 aa7.2□□□□□ -1.26
SRSF1-202ENST00000578430 MP68P56378 58 aa7.18□□□□□ -1.26
SRSF1-202ENST00000578430 H3BPC8 53 aa7.17□□□□□ -1.26
SRSF1-202ENST00000578430 H0Y9P7 68 aa7.16□□□□□ -1.26
SRSF1-202ENST00000578430 COX7CP15954 63 aa7.16□□□□□ -1.26
SRSF1-202ENST00000578430 Q5W150 140 aa7.16□□□□□ -1.26
SRSF1-202ENST00000578430 KRTAP4-2Q9BYR5 136 aa7.16□□□□□ -1.26
SRSF1-202ENST00000578430 SEC61BP60468 96 aaKnown RBP7.15□□□□□ -1.26
SRSF1-202ENST00000578430 LCE4AQ5TA78 99 aa7.15□□□□□ -1.26
SRSF1-202ENST00000578430 LOC101927531A0A1B0GV80 90 aa7.11□□□□□ -1.27
SRSF1-202ENST00000578430 LINC00208Q96KT6 92 aa7.1□□□□□ -1.27
SRSF1-202ENST00000578430 PCOTHQ58A44 107 aa7.09□□□□□ -1.27
SRSF1-202ENST00000578430 C1orf64Q8NEQ6 169 aa7.09□□□□□ -1.27
SRSF1-202ENST00000578430 A0A0U1RQV1 116 aa7.08□□□□□ -1.28
SRSF1-202ENST00000578430 IGKV2-30P06310 120 aa7.08□□□□□ -1.28
SRSF1-202ENST00000578430 C20orf197Q8N268 126 aa7.08□□□□□ -1.28
SRSF1-202ENST00000578430 C7orf65Q6ZTY9 151 aa7.07□□□□□ -1.28
SRSF1-202ENST00000578430 KLKP1Q107X0 134 aa7.06□□□□□ -1.28
SRSF1-202ENST00000578430 KRTAP4-11Q9BYQ6 195 aa7.05□□□□□ -1.28
SRSF1-202ENST00000578430 IGKV2D-30A0A075B6S6 120 aa7.04□□□□□ -1.28
SRSF1-202ENST00000578430 CYP4F30PQ9H0H9 118 aa7.04□□□□□ -1.28
SRSF1-202ENST00000578430 MUC2Q02817 5179 aa7.03□□□□□ -1.28
SRSF1-202ENST00000578430 MUC17Q685J3 4493 aa7.03□□□□□ -1.28
SRSF1-202ENST00000578430 PCP4P48539 62 aa7.03□□□□□ -1.28
SRSF1-202ENST00000578430 SPINK7P58062 85 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms