RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 C14orf132Q9NPU4 83 aa6.09□□□□□ -1.43
GGA3-204ENST00000578208 A0A1B0GVX0 72 aa6.08□□□□□ -1.44
GGA3-204ENST00000578208 TAX1BP3O14907 124 aa6.08□□□□□ -1.44
GGA3-204ENST00000578208 KRTAP19-2Q3LHN2 52 aa6.08□□□□□ -1.44
GGA3-204ENST00000578208 H3BT86 120 aa6.07□□□□□ -1.44
GGA3-204ENST00000578208 NDUFB1O75438 58 aa6.07□□□□□ -1.44
GGA3-204ENST00000578208 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
GGA3-204ENST00000578208 MT1HP80294 61 aa6.05□□□□□ -1.44
GGA3-204ENST00000578208 NOTCH2NLQ7Z3S9 236 aa6.04□□□□□ -1.44
GGA3-204ENST00000578208 M0R2T5 61 aa6.03□□□□□ -1.44
GGA3-204ENST00000578208 MTURNQ8N3F0 131 aa6.03□□□□□ -1.44
GGA3-204ENST00000578208 SPCS1Q9Y6A9 102 aa6.03□□□□□ -1.44
GGA3-204ENST00000578208 NREPQ16612 68 aa6.02□□□□□ -1.45
GGA3-204ENST00000578208 KRTAP9-2Q9BYQ4 174 aa6.02□□□□□ -1.45
GGA3-204ENST00000578208 A8MWP4 228 aa6.01□□□□□ -1.45
GGA3-204ENST00000578208 COL5A1-AS1Q5SY13 56 aa6.01□□□□□ -1.45
GGA3-204ENST00000578208 C8orf17Q9NRJ1 99 aa5.98□□□□□ -1.45
GGA3-204ENST00000578208 IGKV3D-7A0A0C4DH55 119 aa5.96□□□□□ -1.46
GGA3-204ENST00000578208 FAM236DA0A1B0GTK5 79 aa5.96□□□□□ -1.46
GGA3-204ENST00000578208 FAM236CP0DP71 79 aa5.96□□□□□ -1.46
GGA3-204ENST00000578208 PRR15Q8IV56 129 aa5.95□□□□□ -1.46
GGA3-204ENST00000578208 ZCCHC13Q8WW36 166 aaKnown RBP5.95□□□□□ -1.46
GGA3-204ENST00000578208 RBM12B-AS1Q9P1G2 102 aa5.94□□□□□ -1.46
GGA3-204ENST00000578208 K7EP34 96 aa5.93□□□□□ -1.46
GGA3-204ENST00000578208 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
GGA3-204ENST00000578208 Q6ZVQ6 151 aa5.93□□□□□ -1.46
GGA3-204ENST00000578208 Q8N9P0 234 aaPredicted RBP5.93□□□□□ -1.46
GGA3-204ENST00000578208 BPY2O14599 106 aa5.92□□□□□ -1.46
GGA3-204ENST00000578208 PCP4L1A6NKN8 68 aa5.91□□□□□ -1.46
GGA3-204ENST00000578208 TMEM254Q8TBM7 123 aa5.91□□□□□ -1.46
GGA3-204ENST00000578208 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.46
GGA3-204ENST00000578208 SMCPP49901 116 aaPredicted RBP5.9□□□□□ -1.46
GGA3-204ENST00000578208 LCE2DQ5TA82 110 aaPredicted RBP5.9□□□□□ -1.46
GGA3-204ENST00000578208 GTF2H5Q6ZYL4 71 aa5.9□□□□□ -1.46
GGA3-204ENST00000578208 MMP24-AS1A0A0U1RRL7 71 aa5.89□□□□□ -1.47
GGA3-204ENST00000578208 K7EQZ3 153 aa5.89□□□□□ -1.47
GGA3-204ENST00000578208 HRES1P13985 223 aa5.89□□□□□ -1.47
GGA3-204ENST00000578208 MRPL34Q9BQ48 92 aaKnown RBP5.89□□□□□ -1.47
GGA3-204ENST00000578208 hDV103S1A0JD37 113 aa5.88□□□□□ -1.47
GGA3-204ENST00000578208 PRO0461Q9UI25 63 aa5.88□□□□□ -1.47
GGA3-204ENST00000578208 FLGP20930 4061 aaPredicted RBP5.87□□□□□ -1.47
GGA3-204ENST00000578208 NDUFS5O43920 106 aa5.87□□□□□ -1.47
GGA3-204ENST00000578208 UBL5Q9BZL1 73 aa5.87□□□□□ -1.47
GGA3-204ENST00000578208 SPINK7P58062 85 aa5.86□□□□□ -1.47
GGA3-204ENST00000578208 MPLKIPQ8TAP9 179 aa5.85□□□□□ -1.47
GGA3-204ENST00000578208 F8W1H4 67 aa5.82□□□□□ -1.48
GGA3-204ENST00000578208 WFDC13Q8IUB5 93 aa5.82□□□□□ -1.48
GGA3-204ENST00000578208 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
GGA3-204ENST00000578208 CASC2Q6XLA1 102 aa5.81□□□□□ -1.48
GGA3-204ENST00000578208 Q8N9L7 120 aa5.81□□□□□ -1.48
GGA3-204ENST00000578208 LINC00846Q9NV44 126 aa5.81□□□□□ -1.48
GGA3-204ENST00000578208 HCG22E2RYF7 251 aa5.77□□□□□ -1.49
GGA3-204ENST00000578208 ETDBQ3ZM63 59 aa5.77□□□□□ -1.49
GGA3-204ENST00000578208 IGKV2D-30A0A075B6S6 120 aa5.75□□□□□ -1.49
GGA3-204ENST00000578208 IGKV2-30P06310 120 aa5.75□□□□□ -1.49
GGA3-204ENST00000578208 CXCL6P80162 114 aa5.74□□□□□ -1.49
GGA3-204ENST00000578208 C7orf65Q6ZTY9 151 aa5.74□□□□□ -1.49
GGA3-204ENST00000578208 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
GGA3-204ENST00000578208 Q5W150 140 aa5.71□□□□□ -1.5
GGA3-204ENST00000578208 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.5
GGA3-204ENST00000578208 ACYP1P07311 99 aa5.68□□□□□ -1.5
GGA3-204ENST00000578208 H1FX-AS1Q4G0G2 97 aa5.67□□□□□ -1.5
GGA3-204ENST00000578208 MT2AP02795 61 aa5.66□□□□□ -1.5
GGA3-204ENST00000578208 TP53AIP1Q9HCN2 124 aa5.65□□□□□ -1.5
GGA3-204ENST00000578208 FAM240AA0A1B0GVK7 77 aa5.64□□□□□ -1.51
GGA3-204ENST00000578208 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
GGA3-204ENST00000578208 ATP5EP2Q5VTU8 51 aa5.63□□□□□ -1.51
GGA3-204ENST00000578208 MT1FP04733 61 aa5.61□□□□□ -1.51
GGA3-204ENST00000578208 C4orf26Q17RF5 130 aa5.61□□□□□ -1.51
GGA3-204ENST00000578208 FSIP2Q5CZC0 6907 aa5.6□□□□□ -1.51
GGA3-204ENST00000578208 HIST1H4AP62805 103 aaKnown RBP5.58□□□□□ -1.52
GGA3-204ENST00000578208 A0A1B0GV90 55 aa5.56□□□□□ -1.52
GGA3-204ENST00000578208 TRAV22A0A0B4J277 110 aa5.54□□□□□ -1.52
GGA3-204ENST00000578208 LINC00643Q86TS7 51 aa5.53□□□□□ -1.52
GGA3-204ENST00000578208 C1orf64Q8NEQ6 169 aa5.53□□□□□ -1.52
GGA3-204ENST00000578208 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
GGA3-204ENST00000578208 LOC101927531A0A1B0GV80 90 aa5.52□□□□□ -1.53
GGA3-204ENST00000578208 S4R3F8 94 aa5.51□□□□□ -1.53
GGA3-204ENST00000578208 J3QR89 54 aa5.5□□□□□ -1.53
GGA3-204ENST00000578208 UQCRQO14949 82 aa5.5□□□□□ -1.53
GGA3-204ENST00000578208 CYP4F30PQ9H0H9 118 aa5.49□□□□□ -1.53
GGA3-204ENST00000578208 ATOX1O00244 68 aa5.48□□□□□ -1.53
GGA3-204ENST00000578208 LCE2BO14633 110 aa5.48□□□□□ -1.53
GGA3-204ENST00000578208 A0A087WVE0 104 aa5.47□□□□□ -1.53
GGA3-204ENST00000578208 H0Y9P7 68 aa5.47□□□□□ -1.53
GGA3-204ENST00000578208 C5orf47Q569G3 176 aa5.47□□□□□ -1.53
GGA3-204ENST00000578208 KRTAP3-1Q9BYR8 98 aa5.46□□□□□ -1.54
GGA3-204ENST00000578208 USH2AO75445 5202 aa5.46□□□□□ -1.54
GGA3-204ENST00000578208 CSAG1Q6PB30 78 aa5.45□□□□□ -1.54
GGA3-204ENST00000578208 FAM236AA0A1B0GUQ0 79 aa5.43□□□□□ -1.54
GGA3-204ENST00000578208 FAM236BA0A1B0GV22 79 aa5.43□□□□□ -1.54
GGA3-204ENST00000578208 LCA10Q71F78 164 aa5.43□□□□□ -1.54
GGA3-204ENST00000578208 MP68P56378 58 aa5.4□□□□□ -1.54
GGA3-204ENST00000578208 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
GGA3-204ENST00000578208 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
GGA3-204ENST00000578208 LINC00208Q96KT6 92 aa5.38□□□□□ -1.55
GGA3-204ENST00000578208 SCGB1A1P11684 91 aa5.35□□□□□ -1.55
GGA3-204ENST00000578208 OCR1Q9BZK8 76 aa5.35□□□□□ -1.55
GGA3-204ENST00000578208 A8MUN3 132 aa5.34□□□□□ -1.55
GGA3-204ENST00000578208 NDUFC1O43677 76 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms