RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 LRP1Q07954 4544 aaKnown RBP10.58□□□□□ -0.72
PRKCA-203ENST00000578063 FLG2Q5D862 2391 aaPredicted RBP10.57□□□□□ -0.72
PRKCA-203ENST00000578063 TNXBP22105 4242 aa10.56□□□□□ -0.72
PRKCA-203ENST00000578063 OXTP01178 125 aa10.56□□□□□ -0.72
PRKCA-203ENST00000578063 HERC2O95714 4834 aa10.55□□□□□ -0.72
PRKCA-203ENST00000578063 A0A1B0GVX0 72 aa10.54□□□□□ -0.72
PRKCA-203ENST00000578063 HCG22E2RYF7 251 aa10.52□□□□□ -0.73
PRKCA-203ENST00000578063 MT1HL1P0DM35 61 aa10.52□□□□□ -0.73
PRKCA-203ENST00000578063 LCE2BO14633 110 aa10.5□□□□□ -0.73
PRKCA-203ENST00000578063 MYCBP2O75592 4640 aa10.5□□□□□ -0.73
PRKCA-203ENST00000578063 IGHV6-1A0A0B4J1U7 121 aa10.5□□□□□ -0.73
PRKCA-203ENST00000578063 ATOX1O00244 68 aa10.49□□□□□ -0.73
PRKCA-203ENST00000578063 C8orf17Q9NRJ1 99 aa10.47□□□□□ -0.73
PRKCA-203ENST00000578063 MMP24-AS1A0A0U1RRL7 71 aa10.47□□□□□ -0.73
PRKCA-203ENST00000578063 KRTAP29-1A8MX34 341 aaPredicted RBP10.46□□□□□ -0.74
PRKCA-203ENST00000578063 C8orf87E5RJ46 101 aa10.45□□□□□ -0.74
PRKCA-203ENST00000578063 WFDC13Q8IUB5 93 aa10.45□□□□□ -0.74
PRKCA-203ENST00000578063 CASC2Q6XLA1 102 aa10.44□□□□□ -0.74
PRKCA-203ENST00000578063 hDV103S1A0JD37 113 aa10.42□□□□□ -0.74
PRKCA-203ENST00000578063 ANAPC13Q9BS18 74 aa10.42□□□□□ -0.74
PRKCA-203ENST00000578063 ABCA13Q86UQ4 5058 aa10.42□□□□□ -0.74
PRKCA-203ENST00000578063 SMIM20Q8N5G0 67 aa10.4□□□□□ -0.74
PRKCA-203ENST00000578063 RETNLBQ9BQ08 111 aa10.39□□□□□ -0.75
PRKCA-203ENST00000578063 NOTCH2NLQ7Z3S9 236 aa10.38□□□□□ -0.75
PRKCA-203ENST00000578063 LINC00313P59037 77 aa10.38□□□□□ -0.75
PRKCA-203ENST00000578063 TMEM254Q8TBM7 123 aa10.37□□□□□ -0.75
PRKCA-203ENST00000578063 J3QL48 77 aa10.35□□□□□ -0.75
PRKCA-203ENST00000578063 PCP4P48539 62 aa10.35□□□□□ -0.75
PRKCA-203ENST00000578063 FP248Q71RG6 208 aaPredicted RBP10.35□□□□□ -0.75
PRKCA-203ENST00000578063 MRPL34Q9BQ48 92 aaKnown RBP10.34□□□□□ -0.75
PRKCA-203ENST00000578063 DMBT1Q9UGM3 2413 aaPredicted RBP10.33□□□□□ -0.76
PRKCA-203ENST00000578063 TRAV7A0A075B6U4 112 aa10.33□□□□□ -0.76
PRKCA-203ENST00000578063 SERP2Q8N6R1 65 aa10.33□□□□□ -0.76
PRKCA-203ENST00000578063 OCR1Q9BZK8 76 aa10.33□□□□□ -0.76
PRKCA-203ENST00000578063 COX7CP15954 63 aa10.28□□□□□ -0.76
PRKCA-203ENST00000578063 KRTAP16-1A8MUX0 517 aa10.27□□□□□ -0.76
PRKCA-203ENST00000578063 TP53AIP1Q9HCN2 124 aa10.26□□□□□ -0.77
PRKCA-203ENST00000578063 NDUFS5O43920 106 aa10.25□□□□□ -0.77
PRKCA-203ENST00000578063 UQCRQO14949 82 aa10.24□□□□□ -0.77
PRKCA-203ENST00000578063 Q8N9P0 234 aaPredicted RBP10.24□□□□□ -0.77
PRKCA-203ENST00000578063 IGLV7-46A0A075B6I9 117 aa10.23□□□□□ -0.77
PRKCA-203ENST00000578063 C9orf92A6NGG3 77 aa10.21□□□□□ -0.77
PRKCA-203ENST00000578063 PRR4Q16378 134 aa10.19□□□□□ -0.78
PRKCA-203ENST00000578063 C5orf47Q569G3 176 aa10.18□□□□□ -0.78
PRKCA-203ENST00000578063 CCDC179H3BU77 68 aa10.17□□□□□ -0.78
PRKCA-203ENST00000578063 TRAV22A0A0B4J277 110 aa10.14□□□□□ -0.79
PRKCA-203ENST00000578063 MP68P56378 58 aa10.13□□□□□ -0.79
PRKCA-203ENST00000578063 KRTAP13-3Q3SY46 172 aa10.13□□□□□ -0.79
PRKCA-203ENST00000578063 C20orf166-AS1Q96NR2 134 aa10.13□□□□□ -0.79
PRKCA-203ENST00000578063 C20orf197Q8N268 126 aa10.13□□□□□ -0.79
PRKCA-203ENST00000578063 H0Y9P7 68 aa10.12□□□□□ -0.79
PRKCA-203ENST00000578063 PCLOQ9Y6V0 5065 aa10.11□□□□□ -0.79
PRKCA-203ENST00000578063 A8MUU9 505 aa10.11□□□□□ -0.79
PRKCA-203ENST00000578063 H3BPC8 53 aa10.08□□□□□ -0.8
PRKCA-203ENST00000578063 KLKP1Q107X0 134 aa10.08□□□□□ -0.8
PRKCA-203ENST00000578063 TPRXLQ17RH7 258 aa10.08□□□□□ -0.8
PRKCA-203ENST00000578063 A0A0U1RQV1 116 aa10.07□□□□□ -0.8
PRKCA-203ENST00000578063 Q75L30 129 aa10.07□□□□□ -0.8
PRKCA-203ENST00000578063 Q5W150 140 aa10.06□□□□□ -0.8
PRKCA-203ENST00000578063 SNURFQ9Y675 71 aa10.05□□□□□ -0.8
PRKCA-203ENST00000578063 XP32Q5T750 250 aa10.04□□□□□ -0.8
PRKCA-203ENST00000578063 LCE2AQ5TA79 106 aaPredicted RBP10.04□□□□□ -0.8
PRKCA-203ENST00000578063 LINC00208Q96KT6 92 aa10.04□□□□□ -0.8
PRKCA-203ENST00000578063 ZCCHC13Q8WW36 166 aaKnown RBP10.02□□□□□ -0.8
PRKCA-203ENST00000578063 C1orf64Q8NEQ6 169 aa10.02□□□□□ -0.81
PRKCA-203ENST00000578063 LOC101927531A0A1B0GV80 90 aa9.98□□□□□ -0.81
PRKCA-203ENST00000578063 NDUFC1O43677 76 aa9.98□□□□□ -0.81
PRKCA-203ENST00000578063 RPL37P61927 97 aaKnown RBP9.98□□□□□ -0.81
PRKCA-203ENST00000578063 CYSTM1Q9H1C7 97 aa9.98□□□□□ -0.81
PRKCA-203ENST00000578063 ATP11AUNQ6ZP68 121 aa9.93□□□□□ -0.82
PRKCA-203ENST00000578063 H7BZZ5 65 aa9.91□□□□□ -0.82
PRKCA-203ENST00000578063 IGKV2-30P06310 120 aa9.9□□□□□ -0.82
PRKCA-203ENST00000578063 CYP4F30PQ9H0H9 118 aa9.88□□□□□ -0.83
PRKCA-203ENST00000578063 IGKV2D-30A0A075B6S6 120 aa9.86□□□□□ -0.83
PRKCA-203ENST00000578063 C7orf65Q6ZTY9 151 aa9.85□□□□□ -0.83
PRKCA-203ENST00000578063 HERC1Q15751 4861 aa9.85□□□□□ -0.83
PRKCA-203ENST00000578063 TMEM258P61165 79 aa9.85□□□□□ -0.83
PRKCA-203ENST00000578063 PCOTHQ58A44 107 aa9.82□□□□□ -0.84
PRKCA-203ENST00000578063 LPAP08519 4548 aa9.82□□□□□ -0.84
PRKCA-203ENST00000578063 KRTAP4-8Q9BYQ9 185 aa9.82□□□□□ -0.84
PRKCA-203ENST00000578063 SPINK7P58062 85 aa9.76□□□□□ -0.85
PRKCA-203ENST00000578063 SPANXA2-OT1Q8N9U9 137 aa9.76□□□□□ -0.85
PRKCA-203ENST00000578063 FAM236DA0A1B0GTK5 79 aa9.76□□□□□ -0.85
PRKCA-203ENST00000578063 FAM236CP0DP71 79 aa9.76□□□□□ -0.85
PRKCA-203ENST00000578063 LRP2P98164 4655 aa9.75□□□□□ -0.85
PRKCA-203ENST00000578063 ATP5EP56381 51 aaPredicted RBP9.75□□□□□ -0.85
PRKCA-203ENST00000578063 SEC61BP60468 96 aaKnown RBP9.74□□□□□ -0.85
PRKCA-203ENST00000578063 HMCN2Q8NDA2 5059 aa9.73□□□□□ -0.85
PRKCA-203ENST00000578063 HRES1P13985 223 aa9.72□□□□□ -0.85
PRKCA-203ENST00000578063 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.64□□□□□ -0.87
PRKCA-203ENST00000578063 KRTAP9-2Q9BYQ4 174 aa9.61□□□□□ -0.87
PRKCA-203ENST00000578063 MUC17Q685J3 4493 aa9.59□□□□□ -0.87
PRKCA-203ENST00000578063 C4orf26Q17RF5 130 aa9.59□□□□□ -0.87
PRKCA-203ENST00000578063 KRTAP9-6A0A140TA67 174 aa9.58□□□□□ -0.88
PRKCA-203ENST00000578063 DMAC1Q96GE9 116 aa9.58□□□□□ -0.88
PRKCA-203ENST00000578063 A8MUN3 132 aa9.53□□□□□ -0.88
PRKCA-203ENST00000578063 SERP1Q9Y6X1 66 aa9.53□□□□□ -0.88
PRKCA-203ENST00000578063 COX6B2Q6YFQ2 88 aa9.52□□□□□ -0.89
PRKCA-203ENST00000578063 ACYP2P14621 99 aa9.51□□□□□ -0.89
PRKCA-203ENST00000578063 MPLKIPQ8TAP9 179 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms