RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 RETNLBQ9BQ08 111 aa6.19□□□□□ -1.42
CDK5RAP3-204ENST00000577664 J3QR89 54 aa6.18□□□□□ -1.42
CDK5RAP3-204ENST00000577664 UBL5Q9BZL1 73 aa6.18□□□□□ -1.42
CDK5RAP3-204ENST00000577664 IGLV7-46A0A075B6I9 117 aa6.17□□□□□ -1.42
CDK5RAP3-204ENST00000577664 TPRXLQ17RH7 258 aa6.17□□□□□ -1.42
CDK5RAP3-204ENST00000577664 IGKV4-1P06312 121 aa6.16□□□□□ -1.42
CDK5RAP3-204ENST00000577664 MUC17Q685J3 4493 aa6.15□□□□□ -1.42
CDK5RAP3-204ENST00000577664 PRR4Q16378 134 aa6.15□□□□□ -1.42
CDK5RAP3-204ENST00000577664 KRTAP13-3Q3SY46 172 aa6.15□□□□□ -1.42
CDK5RAP3-204ENST00000577664 SIGMAR1Q99720 223 aa6.14□□□□□ -1.43
CDK5RAP3-204ENST00000577664 A8MWP4 228 aa6.13□□□□□ -1.43
CDK5RAP3-204ENST00000577664 DSCR10P59022 87 aa6.13□□□□□ -1.43
CDK5RAP3-204ENST00000577664 DEFB116Q30KQ4 102 aa6.13□□□□□ -1.43
CDK5RAP3-204ENST00000577664 K7ERU9 68 aa6.12□□□□□ -1.43
CDK5RAP3-204ENST00000577664 BPY2O14599 106 aa6.12□□□□□ -1.43
CDK5RAP3-204ENST00000577664 CXCL6P80162 114 aa6.12□□□□□ -1.43
CDK5RAP3-204ENST00000577664 IGKV3D-7A0A0C4DH55 119 aa6.1□□□□□ -1.43
CDK5RAP3-204ENST00000577664 A0A1B0GVX0 72 aa6.1□□□□□ -1.43
CDK5RAP3-204ENST00000577664 NDUFB1O75438 58 aa6.1□□□□□ -1.43
CDK5RAP3-204ENST00000577664 PRR15Q8IV56 129 aa6.1□□□□□ -1.43
CDK5RAP3-204ENST00000577664 LINC00643Q86TS7 51 aa6.09□□□□□ -1.43
CDK5RAP3-204ENST00000577664 C8orf87E5RJ46 101 aa6.08□□□□□ -1.44
CDK5RAP3-204ENST00000577664 ATP5EP2Q5VTU8 51 aa6.08□□□□□ -1.44
CDK5RAP3-204ENST00000577664 CDIP1Q9H305 208 aa6.08□□□□□ -1.44
CDK5RAP3-204ENST00000577664 LINC00313P59037 77 aa6.07□□□□□ -1.44
CDK5RAP3-204ENST00000577664 XP32Q5T750 250 aa6.06□□□□□ -1.44
CDK5RAP3-204ENST00000577664 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
CDK5RAP3-204ENST00000577664 K7EQZ3 153 aa6.05□□□□□ -1.44
CDK5RAP3-204ENST00000577664 NOTCH2NLQ7Z3S9 236 aa6.05□□□□□ -1.44
CDK5RAP3-204ENST00000577664 IGHV6-1A0A0B4J1U7 121 aa6.04□□□□□ -1.44
CDK5RAP3-204ENST00000577664 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
CDK5RAP3-204ENST00000577664 C8orf17Q9NRJ1 99 aa6.03□□□□□ -1.44
CDK5RAP3-204ENST00000577664 C9orf92A6NGG3 77 aa6.02□□□□□ -1.45
CDK5RAP3-204ENST00000577664 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
CDK5RAP3-204ENST00000577664 A8MUU9 505 aa6.01□□□□□ -1.45
CDK5RAP3-204ENST00000577664 Q75L30 129 aa6.01□□□□□ -1.45
CDK5RAP3-204ENST00000577664 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
CDK5RAP3-204ENST00000577664 Q8N9L7 120 aa6□□□□□ -1.45
CDK5RAP3-204ENST00000577664 hDV103S1A0JD37 113 aa5.98□□□□□ -1.45
CDK5RAP3-204ENST00000577664 RPL37P61927 97 aaKnown RBP5.98□□□□□ -1.45
CDK5RAP3-204ENST00000577664 TMEM254Q8TBM7 123 aa5.98□□□□□ -1.45
CDK5RAP3-204ENST00000577664 IMUPQ9GZP8 106 aa5.98□□□□□ -1.45
CDK5RAP3-204ENST00000577664 HCG22E2RYF7 251 aa5.96□□□□□ -1.46
CDK5RAP3-204ENST00000577664 MRPL34Q9BQ48 92 aaKnown RBP5.96□□□□□ -1.46
CDK5RAP3-204ENST00000577664 CASC2Q6XLA1 102 aa5.95□□□□□ -1.46
CDK5RAP3-204ENST00000577664 SEC61BP60468 96 aaKnown RBP5.93□□□□□ -1.46
CDK5RAP3-204ENST00000577664 HIST1H4AP62805 103 aaKnown RBP5.92□□□□□ -1.46
CDK5RAP3-204ENST00000577664 MT-ATP8P03928 68 aa5.91□□□□□ -1.46
CDK5RAP3-204ENST00000577664 WFDC13Q8IUB5 93 aa5.9□□□□□ -1.46
CDK5RAP3-204ENST00000577664 ATP11AUNQ6ZP68 121 aa5.89□□□□□ -1.47
CDK5RAP3-204ENST00000577664 A0A087WVE0 104 aa5.88□□□□□ -1.47
CDK5RAP3-204ENST00000577664 TP53AIP1Q9HCN2 124 aa5.88□□□□□ -1.47
CDK5RAP3-204ENST00000577664 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
CDK5RAP3-204ENST00000577664 PCOTHQ58A44 107 aa5.86□□□□□ -1.47
CDK5RAP3-204ENST00000577664 ZCCHC13Q8WW36 166 aaKnown RBP5.86□□□□□ -1.47
CDK5RAP3-204ENST00000577664 LCE2CQ5TA81 110 aa5.85□□□□□ -1.47
CDK5RAP3-204ENST00000577664 SSPOA2VEC9 5147 aa5.84□□□□□ -1.47
CDK5RAP3-204ENST00000577664 NDUFS5O43920 106 aa5.82□□□□□ -1.48
CDK5RAP3-204ENST00000577664 Q5W150 140 aa5.81□□□□□ -1.48
CDK5RAP3-204ENST00000577664 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
CDK5RAP3-204ENST00000577664 OCR1Q9BZK8 76 aa5.81□□□□□ -1.48
CDK5RAP3-204ENST00000577664 FCGBPQ9Y6R7 5405 aaPredicted RBP5.8□□□□□ -1.48
CDK5RAP3-204ENST00000577664 UQCRQO14949 82 aa5.8□□□□□ -1.48
CDK5RAP3-204ENST00000577664 KRTAP10-6P60371 365 aaPredicted RBP5.8□□□□□ -1.48
CDK5RAP3-204ENST00000577664 MT1HP80294 61 aa5.8□□□□□ -1.48
CDK5RAP3-204ENST00000577664 USH2AO75445 5202 aa5.77□□□□□ -1.49
CDK5RAP3-204ENST00000577664 SMIM20Q8N5G0 67 aa5.76□□□□□ -1.49
CDK5RAP3-204ENST00000577664 FAM236AA0A1B0GUQ0 79 aa5.75□□□□□ -1.49
CDK5RAP3-204ENST00000577664 FAM236BA0A1B0GV22 79 aa5.75□□□□□ -1.49
CDK5RAP3-204ENST00000577664 SCGB1A1P11684 91 aa5.75□□□□□ -1.49
CDK5RAP3-204ENST00000577664 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
CDK5RAP3-204ENST00000577664 TRAV22A0A0B4J277 110 aa5.74□□□□□ -1.49
CDK5RAP3-204ENST00000577664 SPINK7P58062 85 aa5.74□□□□□ -1.49
CDK5RAP3-204ENST00000577664 C5orf47Q569G3 176 aa5.74□□□□□ -1.49
CDK5RAP3-204ENST00000577664 ATOX1O00244 68 aa5.73□□□□□ -1.49
CDK5RAP3-204ENST00000577664 TRAV7A0A075B6U4 112 aa5.72□□□□□ -1.49
CDK5RAP3-204ENST00000577664 IGKV2-30P06310 120 aa5.72□□□□□ -1.49
CDK5RAP3-204ENST00000577664 MPLKIPQ8TAP9 179 aa5.72□□□□□ -1.49
CDK5RAP3-204ENST00000577664 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
CDK5RAP3-204ENST00000577664 H3BPC8 53 aa5.7□□□□□ -1.5
CDK5RAP3-204ENST00000577664 HRES1P13985 223 aa5.7□□□□□ -1.5
CDK5RAP3-204ENST00000577664 C7orf65Q6ZTY9 151 aa5.7□□□□□ -1.5
CDK5RAP3-204ENST00000577664 LOC101927531A0A1B0GV80 90 aa5.69□□□□□ -1.5
CDK5RAP3-204ENST00000577664 H0Y9P7 68 aa5.68□□□□□ -1.5
CDK5RAP3-204ENST00000577664 CYP4F30PQ9H0H9 118 aa5.68□□□□□ -1.5
CDK5RAP3-204ENST00000577664 MP68P56378 58 aa5.67□□□□□ -1.5
CDK5RAP3-204ENST00000577664 MACF1Q9UPN3 7388 aaKnown RBP5.67□□□□□ -1.5
CDK5RAP3-204ENST00000577664 SERP2Q8N6R1 65 aa5.66□□□□□ -1.5
CDK5RAP3-204ENST00000577664 IGKV2D-30A0A075B6S6 120 aa5.65□□□□□ -1.5
CDK5RAP3-204ENST00000577664 C1orf64Q8NEQ6 169 aa5.64□□□□□ -1.51
CDK5RAP3-204ENST00000577664 LINC00208Q96KT6 92 aa5.63□□□□□ -1.51
CDK5RAP3-204ENST00000577664 RBM12B-AS1Q9P1G2 102 aa5.61□□□□□ -1.51
CDK5RAP3-204ENST00000577664 FLGP20930 4061 aaPredicted RBP5.6□□□□□ -1.51
CDK5RAP3-204ENST00000577664 COX7CP15954 63 aa5.59□□□□□ -1.51
CDK5RAP3-204ENST00000577664 KRTAP6-3Q3LI67 103 aa5.59□□□□□ -1.51
CDK5RAP3-204ENST00000577664 KRTAP19-1Q8IUB9 90 aa5.59□□□□□ -1.51
CDK5RAP3-204ENST00000577664 KLKP1Q107X0 134 aa5.57□□□□□ -1.52
CDK5RAP3-204ENST00000577664 COX6B2Q6YFQ2 88 aa5.57□□□□□ -1.52
CDK5RAP3-204ENST00000577664 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
CDK5RAP3-204ENST00000577664 C4orf26Q17RF5 130 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms