RNA–Protein interactions for RNA: ENST00000576601.1

CIITA-211, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 4

Gene CIITA, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-211ENST00000576601 ORMDL1Q9P0S3 153 aa6.75□□□□□ -1.33
CIITA-211ENST00000576601 KMT2DO14686 5537 aa6.75□□□□□ -1.33
CIITA-211ENST00000576601 CCKP06307 115 aa6.74□□□□□ -1.33
CIITA-211ENST00000576601 DNAL4O96015 105 aa6.73□□□□□ -1.33
CIITA-211ENST00000576601 GHRHP01286 108 aa6.73□□□□□ -1.33
CIITA-211ENST00000576601 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
CIITA-211ENST00000576601 TRACP01848 142 aa6.71□□□□□ -1.34
CIITA-211ENST00000576601 PSMB2P49721 201 aa6.7□□□□□ -1.34
CIITA-211ENST00000576601 A0A1B0GVX0 72 aa6.68□□□□□ -1.34
CIITA-211ENST00000576601 HSD52Q0P140 79 aa6.68□□□□□ -1.34
CIITA-211ENST00000576601 VPS25Q9BRG1 176 aa6.68□□□□□ -1.34
CIITA-211ENST00000576601 TMEM256-PLSCR3K7ERE1 68 aa6.67□□□□□ -1.34
CIITA-211ENST00000576601 PYY3Q5JQD4 70 aa6.65□□□□□ -1.34
CIITA-211ENST00000576601 C8orf87E5RJ46 101 aa6.64□□□□□ -1.35
CIITA-211ENST00000576601 H3BQ85 93 aa6.64□□□□□ -1.35
CIITA-211ENST00000576601 UBE2V1Q13404 147 aa6.64□□□□□ -1.35
CIITA-211ENST00000576601 ZCCHC13Q8WW36 166 aaKnown RBP6.64□□□□□ -1.35
CIITA-211ENST00000576601 COX6CP09669 75 aa6.62□□□□□ -1.35
CIITA-211ENST00000576601 SPINK7P58062 85 aa6.61□□□□□ -1.35
CIITA-211ENST00000576601 RBM3P98179 157 aaKnown RBP6.59□□□□□ -1.35
CIITA-211ENST00000576601 DSCR8Q96T75 97 aa6.58□□□□□ -1.36
CIITA-211ENST00000576601 WFDC13Q8IUB5 93 aa6.57□□□□□ -1.36
CIITA-211ENST00000576601 MTURNQ8N3F0 131 aa6.56□□□□□ -1.36
CIITA-211ENST00000576601 Q8N9P0 234 aaPredicted RBP6.56□□□□□ -1.36
CIITA-211ENST00000576601 Q6ZQT0 140 aa6.55□□□□□ -1.36
CIITA-211ENST00000576601 J3KT08 172 aa6.54□□□□□ -1.36
CIITA-211ENST00000576601 SCGB1C2P0DMR2 95 aa6.54□□□□□ -1.36
CIITA-211ENST00000576601 C8orf17Q9NRJ1 99 aa6.54□□□□□ -1.36
CIITA-211ENST00000576601 UQCR10Q9UDW1 63 aa6.54□□□□□ -1.36
CIITA-211ENST00000576601 C9JAW5 83 aa6.53□□□□□ -1.36
CIITA-211ENST00000576601 BAALC-AS2P0C853 105 aa6.53□□□□□ -1.36
CIITA-211ENST00000576601 KRTAP5-9P26371 169 aa6.52□□□□□ -1.37
CIITA-211ENST00000576601 IGKV3D-7A0A0C4DH55 119 aa6.51□□□□□ -1.37
CIITA-211ENST00000576601 NAA38Q9BRA0 125 aaKnown RBP6.51□□□□□ -1.37
CIITA-211ENST00000576601 A8MWP4 228 aa6.5□□□□□ -1.37
CIITA-211ENST00000576601 NDUFB1O75438 58 aa6.48□□□□□ -1.37
CIITA-211ENST00000576601 LYRM7Q5U5X0 104 aa6.48□□□□□ -1.37
CIITA-211ENST00000576601 Q6ZVQ6 151 aa6.47□□□□□ -1.37
CIITA-211ENST00000576601 TMA7Q9Y2S6 64 aaKnown RBP6.47□□□□□ -1.37
CIITA-211ENST00000576601 LOC110117498A0A087WWA1 95 aa6.46□□□□□ -1.38
CIITA-211ENST00000576601 C14orf132Q9NPU4 83 aa6.46□□□□□ -1.38
CIITA-211ENST00000576601 KRTAP2-3P0C7H8 128 aa6.45□□□□□ -1.38
CIITA-211ENST00000576601 C21orf62-AS1Q17RA5 79 aa6.45□□□□□ -1.38
CIITA-211ENST00000576601 KRTAP2-4Q9BYR9 128 aa6.45□□□□□ -1.38
CIITA-211ENST00000576601 MMP24-AS1A0A0U1RRL7 71 aa6.44□□□□□ -1.38
CIITA-211ENST00000576601 PRR15Q8IV56 129 aa6.43□□□□□ -1.38
CIITA-211ENST00000576601 ATXN8Q156A1 80 aa6.42□□□□□ -1.38
CIITA-211ENST00000576601 JMJD7-PLA2G4BH0Y9G9 81 aa6.41□□□□□ -1.38
CIITA-211ENST00000576601 MRPL34Q9BQ48 92 aaKnown RBP6.4□□□□□ -1.38
CIITA-211ENST00000576601 A6NN06 94 aa6.39□□□□□ -1.39
CIITA-211ENST00000576601 TMEM254Q8TBM7 123 aa6.39□□□□□ -1.39
CIITA-211ENST00000576601 A0A1B0GW54 56 aa6.38□□□□□ -1.39
CIITA-211ENST00000576601 K7EQZ3 153 aa6.38□□□□□ -1.39
CIITA-211ENST00000576601 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
CIITA-211ENST00000576601 GPR98Q8WXG9 6306 aa6.35□□□□□ -1.39
CIITA-211ENST00000576601 PDE6GP18545 87 aa6.35□□□□□ -1.39
CIITA-211ENST00000576601 NREPQ16612 68 aa6.35□□□□□ -1.39
CIITA-211ENST00000576601 IGKV2D-30A0A075B6S6 120 aa6.34□□□□□ -1.39
CIITA-211ENST00000576601 hDV103S1A0JD37 113 aa6.34□□□□□ -1.39
CIITA-211ENST00000576601 NDUFS5O43920 106 aa6.34□□□□□ -1.39
CIITA-211ENST00000576601 IGKV2-30P06310 120 aa6.34□□□□□ -1.39
CIITA-211ENST00000576601 Q5W150 140 aa6.34□□□□□ -1.39
CIITA-211ENST00000576601 M0R143 59 aa6.33□□□□□ -1.4
CIITA-211ENST00000576601 MT1BP07438 61 aa6.32□□□□□ -1.4
CIITA-211ENST00000576601 C7orf65Q6ZTY9 151 aa6.29□□□□□ -1.4
CIITA-211ENST00000576601 Q8N9L7 120 aa6.28□□□□□ -1.4
CIITA-211ENST00000576601 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
CIITA-211ENST00000576601 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
CIITA-211ENST00000576601 BPY2O14599 106 aa6.24□□□□□ -1.41
CIITA-211ENST00000576601 BATFQ16520 125 aa6.24□□□□□ -1.41
CIITA-211ENST00000576601 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
CIITA-211ENST00000576601 C5orf47Q569G3 176 aa6.22□□□□□ -1.41
CIITA-211ENST00000576601 H3BT86 120 aa6.21□□□□□ -1.42
CIITA-211ENST00000576601 CASC2Q6XLA1 102 aa6.21□□□□□ -1.42
CIITA-211ENST00000576601 KRTAP2-2Q9BYT5 123 aa6.21□□□□□ -1.42
CIITA-211ENST00000576601 KRTAP2-1Q9BYU5 128 aa6.21□□□□□ -1.42
CIITA-211ENST00000576601 KRTAP3-1Q9BYR8 98 aa6.19□□□□□ -1.42
CIITA-211ENST00000576601 SMIM6P0DI80 62 aa6.18□□□□□ -1.42
CIITA-211ENST00000576601 SPRR2EP22531 72 aa6.18□□□□□ -1.42
CIITA-211ENST00000576601 SPRR2BP35325 72 aa6.18□□□□□ -1.42
CIITA-211ENST00000576601 SPRR2AP35326 72 aa6.18□□□□□ -1.42
CIITA-211ENST00000576601 FAM236AA0A1B0GUQ0 79 aa6.17□□□□□ -1.42
CIITA-211ENST00000576601 FAM236BA0A1B0GV22 79 aa6.17□□□□□ -1.42
CIITA-211ENST00000576601 C9orf118A6NHY6 69 aa6.17□□□□□ -1.42
CIITA-211ENST00000576601 TAX1BP3O14907 124 aa6.17□□□□□ -1.42
CIITA-211ENST00000576601 KRTAP19-8Q3LI54 63 aa6.17□□□□□ -1.42
CIITA-211ENST00000576601 A0A1W2PPM0 123 aa6.16□□□□□ -1.42
CIITA-211ENST00000576601 Q5VV11 94 aa6.16□□□□□ -1.42
CIITA-211ENST00000576601 TSTD3H0UI37 97 aa6.14□□□□□ -1.43
CIITA-211ENST00000576601 S4R3F8 94 aa6.14□□□□□ -1.43
CIITA-211ENST00000576601 CXCL6P80162 114 aa6.13□□□□□ -1.43
CIITA-211ENST00000576601 LCA10Q71F78 164 aa6.13□□□□□ -1.43
CIITA-211ENST00000576601 SMCPP49901 116 aaPredicted RBP6.12□□□□□ -1.43
CIITA-211ENST00000576601 SPRR2FQ96RM1 72 aa6.12□□□□□ -1.43
CIITA-211ENST00000576601 SPRR2GQ9BYE4 73 aa6.12□□□□□ -1.43
CIITA-211ENST00000576601 C1orf64Q8NEQ6 169 aa6.08□□□□□ -1.44
CIITA-211ENST00000576601 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
CIITA-211ENST00000576601 SPCS1Q9Y6A9 102 aa6.06□□□□□ -1.44
CIITA-211ENST00000576601 CSAG1Q6PB30 78 aa6.05□□□□□ -1.44
CIITA-211ENST00000576601 KRTAP3-3Q9BYR6 98 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms