RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 PRR26Q8N8Z3 221 aa16.37■□□□□ 0.21
CTDNEP1-210ENST00000574322 LIMD2Q9BT23 127 aa16.37■□□□□ 0.21
CTDNEP1-210ENST00000574322 SPINK1P00995 79 aa16.36■□□□□ 0.21
CTDNEP1-210ENST00000574322 C4orf48Q5BLP8 95 aa16.35■□□□□ 0.21
CTDNEP1-210ENST00000574322 C20orf197Q8N268 126 aa16.34■□□□□ 0.21
CTDNEP1-210ENST00000574322 C8orf17Q9NRJ1 99 aa16.33■□□□□ 0.21
CTDNEP1-210ENST00000574322 ABCA13Q86UQ4 5058 aa16.33■□□□□ 0.2
CTDNEP1-210ENST00000574322 RPS29P62273 56 aaKnown RBP16.31■□□□□ 0.2
CTDNEP1-210ENST00000574322 KLKP1Q107X0 134 aa16.31■□□□□ 0.2
CTDNEP1-210ENST00000574322 C1orf195Q5TG92 126 aa16.31■□□□□ 0.2
CTDNEP1-210ENST00000574322 IGHV6-1A0A0B4J1U7 121 aa16.3■□□□□ 0.2
CTDNEP1-210ENST00000574322 hDV103S1A0JD37 113 aa16.3■□□□□ 0.2
CTDNEP1-210ENST00000574322 SPAG11AQ6PDA7 123 aa16.3■□□□□ 0.2
CTDNEP1-210ENST00000574322 CYSTM1Q9H1C7 97 aa16.3■□□□□ 0.2
CTDNEP1-210ENST00000574322 PKHD1L1Q86WI1 4243 aa16.29■□□□□ 0.2
CTDNEP1-210ENST00000574322 LINC00304Q8N9R0 145 aa16.28■□□□□ 0.2
CTDNEP1-210ENST00000574322 TMEM254Q8TBM7 123 aa16.25■□□□□ 0.19
CTDNEP1-210ENST00000574322 C5orf47Q569G3 176 aa16.22■□□□□ 0.19
CTDNEP1-210ENST00000574322 FLG2Q5D862 2391 aaPredicted RBP16.2■□□□□ 0.18
CTDNEP1-210ENST00000574322 A0A0U1RQV1 116 aa16.19■□□□□ 0.18
CTDNEP1-210ENST00000574322 C8orf87E5RJ46 101 aa16.19■□□□□ 0.18
CTDNEP1-210ENST00000574322 NOTCH2NLQ7Z3S9 236 aa16.19■□□□□ 0.18
CTDNEP1-210ENST00000574322 SNURFQ9Y675 71 aa16.17■□□□□ 0.18
CTDNEP1-210ENST00000574322 MRPL34Q9BQ48 92 aaKnown RBP16.14■□□□□ 0.17
CTDNEP1-210ENST00000574322 MYCBP2O75592 4640 aa16.13■□□□□ 0.17
CTDNEP1-210ENST00000574322 NDUFC1O43677 76 aa16.13■□□□□ 0.17
CTDNEP1-210ENST00000574322 TP53AIP1Q9HCN2 124 aa16.12■□□□□ 0.17
CTDNEP1-210ENST00000574322 TMEM258P61165 79 aa16.11■□□□□ 0.17
CTDNEP1-210ENST00000574322 H7BZZ5 65 aa16.11■□□□□ 0.17
CTDNEP1-210ENST00000574322 PCLOQ9Y6V0 5065 aa16.1■□□□□ 0.17
CTDNEP1-210ENST00000574322 LRP1Q07954 4544 aaKnown RBP16.08■□□□□ 0.17
CTDNEP1-210ENST00000574322 ZCCHC13Q8WW36 166 aaKnown RBP16.07■□□□□ 0.16
CTDNEP1-210ENST00000574322 LINC00313P59037 77 aa16.05■□□□□ 0.16
CTDNEP1-210ENST00000574322 FAT3Q8TDW7 4589 aa16.04■□□□□ 0.16
CTDNEP1-210ENST00000574322 OXTP01178 125 aa16.04■□□□□ 0.16
CTDNEP1-210ENST00000574322 MP68P56378 58 aa16.04■□□□□ 0.16
CTDNEP1-210ENST00000574322 H3BPC8 53 aa16.03■□□□□ 0.16
CTDNEP1-210ENST00000574322 H0Y9P7 68 aa15.99■□□□□ 0.15
CTDNEP1-210ENST00000574322 KRTAP10-8P60410 259 aa15.99■□□□□ 0.15
CTDNEP1-210ENST00000574322 TRAV22A0A0B4J277 110 aa15.98■□□□□ 0.15
CTDNEP1-210ENST00000574322 NDUFS5O43920 106 aa15.95■□□□□ 0.14
CTDNEP1-210ENST00000574322 KRTAP16-1A8MUX0 517 aa15.94■□□□□ 0.14
CTDNEP1-210ENST00000574322 Q8N9P0 234 aaPredicted RBP15.94■□□□□ 0.14
CTDNEP1-210ENST00000574322 J3QL48 77 aa15.91■□□□□ 0.14
CTDNEP1-210ENST00000574322 LINC00208Q96KT6 92 aa15.91■□□□□ 0.14
CTDNEP1-210ENST00000574322 MT1HL1P0DM35 61 aa15.88■□□□□ 0.13
CTDNEP1-210ENST00000574322 FAM236DA0A1B0GTK5 79 aa15.86■□□□□ 0.13
CTDNEP1-210ENST00000574322 FAM236CP0DP71 79 aa15.86■□□□□ 0.13
CTDNEP1-210ENST00000574322 C1orf64Q8NEQ6 169 aa15.85■□□□□ 0.13
CTDNEP1-210ENST00000574322 TNXBP22105 4242 aa15.84■□□□□ 0.13
CTDNEP1-210ENST00000574322 KRTAP13-3Q3SY46 172 aa15.82■□□□□ 0.12
CTDNEP1-210ENST00000574322 ATP5EP56381 51 aaPredicted RBP15.82■□□□□ 0.12
CTDNEP1-210ENST00000574322 Q5W150 140 aa15.77■□□□□ 0.12
CTDNEP1-210ENST00000574322 DMBT1Q9UGM3 2413 aaPredicted RBP15.77■□□□□ 0.11
CTDNEP1-210ENST00000574322 RPS28P62857 69 aaKnown RBP15.74■□□□□ 0.11
CTDNEP1-210ENST00000574322 RETNLBQ9BQ08 111 aa15.68■□□□□ 0.1
CTDNEP1-210ENST00000574322 LOC101927531A0A1B0GV80 90 aa15.67■□□□□ 0.1
CTDNEP1-210ENST00000574322 SPANXA2-OT1Q8N9U9 137 aa15.65■□□□□ 0.1
CTDNEP1-210ENST00000574322 SERP1Q9Y6X1 66 aa15.61■□□□□ 0.09
CTDNEP1-210ENST00000574322 FP248Q71RG6 208 aaPredicted RBP15.59■□□□□ 0.09
CTDNEP1-210ENST00000574322 CYP4F30PQ9H0H9 118 aa15.58■□□□□ 0.08
CTDNEP1-210ENST00000574322 C20orf166-AS1Q96NR2 134 aa15.57■□□□□ 0.08
CTDNEP1-210ENST00000574322 A8MUU9 505 aa15.54■□□□□ 0.08
CTDNEP1-210ENST00000574322 C9orf92A6NGG3 77 aa15.54■□□□□ 0.08
CTDNEP1-210ENST00000574322 HERC1Q15751 4861 aa15.52■□□□□ 0.08
CTDNEP1-210ENST00000574322 PCOTHQ58A44 107 aa15.51■□□□□ 0.07
CTDNEP1-210ENST00000574322 IGLV7-46A0A075B6I9 117 aa15.5■□□□□ 0.07
CTDNEP1-210ENST00000574322 IGKV2-30P06310 120 aa15.49■□□□□ 0.07
CTDNEP1-210ENST00000574322 PRR4Q16378 134 aa15.42■□□□□ 0.06
CTDNEP1-210ENST00000574322 Q75L30 129 aa15.38■□□□□ 0.05
CTDNEP1-210ENST00000574322 HRES1P13985 223 aa15.29■□□□□ 0.04
CTDNEP1-210ENST00000574322 IGKV2D-30A0A075B6S6 120 aa15.28■□□□□ 0.04
CTDNEP1-210ENST00000574322 C7orf65Q6ZTY9 151 aa15.26■□□□□ 0.03
CTDNEP1-210ENST00000574322 SMIM26A0A096LP01 95 aa15.23■□□□□ 0.03
CTDNEP1-210ENST00000574322 HMCN2Q8NDA2 5059 aa15.18■□□□□ 0.02
CTDNEP1-210ENST00000574322 XP32Q5T750 250 aa15.17■□□□□ 0.02
CTDNEP1-210ENST00000574322 RPL37P61927 97 aaKnown RBP15.16■□□□□ 0.02
CTDNEP1-210ENST00000574322 DMAC1Q96GE9 116 aa15.14■□□□□ 0.01
CTDNEP1-210ENST00000574322 COA5Q86WW8 74 aa15.12■□□□□ 0.01
CTDNEP1-210ENST00000574322 TPRXLQ17RH7 258 aa15.1■□□□□ 0.01
CTDNEP1-210ENST00000574322 ATP11AUNQ6ZP68 121 aa15.09■□□□□ 0.01
CTDNEP1-210ENST00000574322 ACYP2P14621 99 aa15.06■□□□□ 0
CTDNEP1-210ENST00000574322 SPINK7P58062 85 aa15.04■□□□□ -0
CTDNEP1-210ENST00000574322 LPAP08519 4548 aa14.95□□□□□ -0.02
CTDNEP1-210ENST00000574322 A8MUN3 132 aa14.92□□□□□ -0.02
CTDNEP1-210ENST00000574322 Q1T7F1 81 aa14.92□□□□□ -0.02
CTDNEP1-210ENST00000574322 C4orf26Q17RF5 130 aa14.89□□□□□ -0.03
CTDNEP1-210ENST00000574322 LRP2P98164 4655 aa14.88□□□□□ -0.03
CTDNEP1-210ENST00000574322 MPLKIPQ8TAP9 179 aa14.86□□□□□ -0.03
CTDNEP1-210ENST00000574322 V9GYY9 64 aa14.82□□□□□ -0.04
CTDNEP1-210ENST00000574322 CHKB-CPT1BH3BT56 60 aa14.77□□□□□ -0.05
CTDNEP1-210ENST00000574322 KRTAP3-1Q9BYR8 98 aa14.76□□□□□ -0.05
CTDNEP1-210ENST00000574322 COX6B2Q6YFQ2 88 aa14.73□□□□□ -0.05
CTDNEP1-210ENST00000574322 LINC01558Q9Y6Z2 57 aa14.65□□□□□ -0.06
CTDNEP1-210ENST00000574322 UBR4Q5T4S7 5183 aa14.64□□□□□ -0.07
CTDNEP1-210ENST00000574322 PSPHP1O15172 72 aa14.54□□□□□ -0.08
CTDNEP1-210ENST00000574322 SEC61BP60468 96 aaKnown RBP14.54□□□□□ -0.08
CTDNEP1-210ENST00000574322 PRR15LQ9BU68 103 aa14.49□□□□□ -0.09
CTDNEP1-210ENST00000574322 Q5VV11 94 aa14.47□□□□□ -0.09
CTDNEP1-210ENST00000574322 SPTSSBQ8NFR3 76 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms