RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 C8orf87E5RJ46 101 aa7.43□□□□□ -1.22
NDE1-209ENST00000574109 ACYP1P07311 99 aa7.43□□□□□ -1.22
NDE1-209ENST00000574109 Q6ZVQ6 151 aa7.43□□□□□ -1.22
NDE1-209ENST00000574109 A8MWP4 228 aa7.42□□□□□ -1.22
NDE1-209ENST00000574109 DEFB116Q30KQ4 102 aa7.42□□□□□ -1.22
NDE1-209ENST00000574109 BPY2O14599 106 aa7.41□□□□□ -1.22
NDE1-209ENST00000574109 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.22
NDE1-209ENST00000574109 LINC00846Q9NV44 126 aa7.4□□□□□ -1.22
NDE1-209ENST00000574109 IGHV6-1A0A0B4J1U7 121 aa7.39□□□□□ -1.23
NDE1-209ENST00000574109 LINC00313P59037 77 aa7.39□□□□□ -1.23
NDE1-209ENST00000574109 J3QR89 54 aa7.38□□□□□ -1.23
NDE1-209ENST00000574109 Q75L30 129 aa7.37□□□□□ -1.23
NDE1-209ENST00000574109 RPL37P61927 97 aaKnown RBP7.36□□□□□ -1.23
NDE1-209ENST00000574109 PRR15Q8IV56 129 aa7.36□□□□□ -1.23
NDE1-209ENST00000574109 DSCR10P59022 87 aa7.35□□□□□ -1.23
NDE1-209ENST00000574109 IGKV3D-7A0A0C4DH55 119 aa7.34□□□□□ -1.23
NDE1-209ENST00000574109 ATP5EP2Q5VTU8 51 aa7.34□□□□□ -1.23
NDE1-209ENST00000574109 C20orf166-AS1Q96NR2 134 aa7.34□□□□□ -1.23
NDE1-209ENST00000574109 UBR4Q5T4S7 5183 aa7.34□□□□□ -1.23
NDE1-209ENST00000574109 CXCL6P80162 114 aa7.33□□□□□ -1.24
NDE1-209ENST00000574109 K7EQZ3 153 aa7.32□□□□□ -1.24
NDE1-209ENST00000574109 C8orf17Q9NRJ1 99 aa7.32□□□□□ -1.24
NDE1-209ENST00000574109 A8MUU9 505 aa7.31□□□□□ -1.24
NDE1-209ENST00000574109 KRTAP16-1A8MUX0 517 aa7.3□□□□□ -1.24
NDE1-209ENST00000574109 ATP11AUNQ6ZP68 121 aa7.28□□□□□ -1.24
NDE1-209ENST00000574109 MMP24-AS1A0A0U1RRL7 71 aa7.27□□□□□ -1.25
NDE1-209ENST00000574109 NOTCH2NLQ7Z3S9 236 aa7.27□□□□□ -1.25
NDE1-209ENST00000574109 TMEM254Q8TBM7 123 aa7.27□□□□□ -1.25
NDE1-209ENST00000574109 hDV103S1A0JD37 113 aa7.25□□□□□ -1.25
NDE1-209ENST00000574109 PCOTHQ58A44 107 aa7.25□□□□□ -1.25
NDE1-209ENST00000574109 K7ERU9 68 aa7.24□□□□□ -1.25
NDE1-209ENST00000574109 LINC00643Q86TS7 51 aa7.24□□□□□ -1.25
NDE1-209ENST00000574109 Q8N9P0 234 aaPredicted RBP7.24□□□□□ -1.25
NDE1-209ENST00000574109 Q8N9L7 120 aa7.23□□□□□ -1.25
NDE1-209ENST00000574109 MRPL34Q9BQ48 92 aaKnown RBP7.23□□□□□ -1.25
NDE1-209ENST00000574109 MUC17Q685J3 4493 aa7.23□□□□□ -1.25
NDE1-209ENST00000574109 CASC2Q6XLA1 102 aa7.22□□□□□ -1.25
NDE1-209ENST00000574109 A0A0U1RQV1 116 aa7.21□□□□□ -1.26
NDE1-209ENST00000574109 HCG22E2RYF7 251 aa7.21□□□□□ -1.26
NDE1-209ENST00000574109 WFDC13Q8IUB5 93 aa7.17□□□□□ -1.26
NDE1-209ENST00000574109 RNF213Q63HN8 5207 aa7.17□□□□□ -1.26
NDE1-209ENST00000574109 ZCCHC13Q8WW36 166 aaKnown RBP7.16□□□□□ -1.26
NDE1-209ENST00000574109 NDUFS5O43920 106 aa7.15□□□□□ -1.26
NDE1-209ENST00000574109 HIST1H4AP62805 103 aaKnown RBP7.13□□□□□ -1.27
NDE1-209ENST00000574109 LCE2BO14633 110 aa7.1□□□□□ -1.27
NDE1-209ENST00000574109 TP53AIP1Q9HCN2 124 aa7.1□□□□□ -1.27
NDE1-209ENST00000574109 MUC2Q02817 5179 aa7.09□□□□□ -1.27
NDE1-209ENST00000574109 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
NDE1-209ENST00000574109 IMUPQ9GZP8 106 aa7.06□□□□□ -1.28
NDE1-209ENST00000574109 A0A087WVE0 104 aa7.02□□□□□ -1.29
NDE1-209ENST00000574109 C7orf65Q6ZTY9 151 aa7.01□□□□□ -1.29
NDE1-209ENST00000574109 SPINK7P58062 85 aa6.99□□□□□ -1.29
NDE1-209ENST00000574109 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
NDE1-209ENST00000574109 RBM12B-AS1Q9P1G2 102 aa6.98□□□□□ -1.29
NDE1-209ENST00000574109 UQCRQO14949 82 aa6.97□□□□□ -1.29
NDE1-209ENST00000574109 Q5W150 140 aa6.97□□□□□ -1.29
NDE1-209ENST00000574109 COX6B2Q6YFQ2 88 aa6.97□□□□□ -1.29
NDE1-209ENST00000574109 MT-ATP8P03928 68 aa6.96□□□□□ -1.3
NDE1-209ENST00000574109 ATOX1O00244 68 aa6.95□□□□□ -1.3
NDE1-209ENST00000574109 IGKV2D-30A0A075B6S6 120 aa6.94□□□□□ -1.3
NDE1-209ENST00000574109 IGKV2-30P06310 120 aa6.94□□□□□ -1.3
NDE1-209ENST00000574109 HRES1P13985 223 aa6.94□□□□□ -1.3
NDE1-209ENST00000574109 MPLKIPQ8TAP9 179 aa6.93□□□□□ -1.3
NDE1-209ENST00000574109 SCGB1A1P11684 91 aa6.92□□□□□ -1.3
NDE1-209ENST00000574109 KRTAP19-2Q3LHN2 52 aa6.92□□□□□ -1.3
NDE1-209ENST00000574109 FAM236DA0A1B0GTK5 79 aa6.91□□□□□ -1.3
NDE1-209ENST00000574109 FAM236CP0DP71 79 aa6.91□□□□□ -1.3
NDE1-209ENST00000574109 LOC101927531A0A1B0GV80 90 aa6.9□□□□□ -1.3
NDE1-209ENST00000574109 SMIM20Q8N5G0 67 aa6.9□□□□□ -1.3
NDE1-209ENST00000574109 OCR1Q9BZK8 76 aa6.9□□□□□ -1.3
NDE1-209ENST00000574109 FAM236AA0A1B0GUQ0 79 aa6.88□□□□□ -1.31
NDE1-209ENST00000574109 FAM236BA0A1B0GV22 79 aa6.88□□□□□ -1.31
NDE1-209ENST00000574109 H0Y9P7 68 aa6.88□□□□□ -1.31
NDE1-209ENST00000574109 FAT4Q6V0I7 4981 aa6.87□□□□□ -1.31
NDE1-209ENST00000574109 MP68P56378 58 aa6.87□□□□□ -1.31
NDE1-209ENST00000574109 LCE2CQ5TA81 110 aa6.87□□□□□ -1.31
NDE1-209ENST00000574109 H3BPC8 53 aa6.85□□□□□ -1.31
NDE1-209ENST00000574109 C5orf47Q569G3 176 aa6.85□□□□□ -1.31
NDE1-209ENST00000574109 LCE2AQ5TA79 106 aaPredicted RBP6.84□□□□□ -1.31
NDE1-209ENST00000574109 FLGP20930 4061 aaPredicted RBP6.81□□□□□ -1.32
NDE1-209ENST00000574109 CYP4F30PQ9H0H9 118 aa6.81□□□□□ -1.32
NDE1-209ENST00000574109 TRAV7A0A075B6U4 112 aa6.8□□□□□ -1.32
NDE1-209ENST00000574109 MT1HP80294 61 aa6.8□□□□□ -1.32
NDE1-209ENST00000574109 C1orf64Q8NEQ6 169 aa6.8□□□□□ -1.32
NDE1-209ENST00000574109 LINC00208Q96KT6 92 aa6.78□□□□□ -1.32
NDE1-209ENST00000574109 M0R2T5 61 aa6.75□□□□□ -1.33
NDE1-209ENST00000574109 C4orf26Q17RF5 130 aa6.75□□□□□ -1.33
NDE1-209ENST00000574109 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
NDE1-209ENST00000574109 SERP2Q8N6R1 65 aa6.71□□□□□ -1.34
NDE1-209ENST00000574109 A8MUN3 132 aa6.68□□□□□ -1.34
NDE1-209ENST00000574109 KLKP1Q107X0 134 aa6.65□□□□□ -1.34
NDE1-209ENST00000574109 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
NDE1-209ENST00000574109 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
NDE1-209ENST00000574109 S4R3F8 94 aa6.62□□□□□ -1.35
NDE1-209ENST00000574109 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
NDE1-209ENST00000574109 COX7CP15954 63 aa6.59□□□□□ -1.35
NDE1-209ENST00000574109 C20orf197Q8N268 126 aa6.59□□□□□ -1.35
NDE1-209ENST00000574109 DMAC1Q96GE9 116 aa6.56□□□□□ -1.36
NDE1-209ENST00000574109 ANAPC13Q9BS18 74 aa6.55□□□□□ -1.36
NDE1-209ENST00000574109 SNURFQ9Y675 71 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms